EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000001667 (Gene tree)
Gene ID: 100354475
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 33782 bases
Position: chrGL018717:3417359-3451140
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000001429	CPSF_A	PF03178.15	1.6e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000001670	DDB1-201	3797	-	ENSOCUP00000001429	1140 (aa)	-	G1SFV7

Gene Model

Click here to download ENSOCUG00000001667's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03420	Nucleotide excision repair	KEGG
ocu04120	Ubiquitin mediated proteolysis	KEGG
ocu05161	Hepatitis B	KEGG
ocu05170	Human immunodeficiency virus 1 infection	KEGG
ocu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000001667	DDB1	100	99.825	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSOCUG00000001667	DDB1	98	91.375	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSOCUG00000001667	DDB1	100	99.912	ENSAMEG00000016518	DDB1	100	99.912	Ailuropoda_melanoleuca
ENSOCUG00000001667	DDB1	86	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSOCUG00000001667	DDB1	100	91.053	ENSAOCG00000003066	ddb1	100	91.053	Amphiprion_ocellaris
ENSOCUG00000001667	DDB1	100	91.140	ENSAPEG00000000092	ddb1	100	91.140	Amphiprion_percula
ENSOCUG00000001667	DDB1	94	91.721	ENSATEG00000020571	ddb1	97	91.721	Anabas_testudineus
ENSOCUG00000001667	DDB1	98	96.622	ENSAPLG00000007174	DDB1	99	96.622	Anas_platyrhynchos
ENSOCUG00000001667	DDB1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSOCUG00000001667	DDB1	100	99.825	ENSANAG00000021878	DDB1	100	99.825	Aotus_nancymaae
ENSOCUG00000001667	DDB1	100	91.404	ENSACLG00000012401	ddb1	100	91.404	Astatotilapia_calliptera
ENSOCUG00000001667	DDB1	100	99.737	ENSBTAG00000021569	DDB1	93	99.737	Bos_taurus
ENSOCUG00000001667	DDB1	100	37.297	WBGene00010890	ddb-1	100	37.211	Caenorhabditis_elegans
ENSOCUG00000001667	DDB1	100	99.825	ENSCJAG00000019319	DDB1	100	99.825	Callithrix_jacchus
ENSOCUG00000001667	DDB1	100	99.912	ENSCAFG00000016264	DDB1	100	99.912	Canis_familiaris
ENSOCUG00000001667	DDB1	94	99.721	ENSCAFG00020012722	DDB1	99	99.721	Canis_lupus_dingo
ENSOCUG00000001667	DDB1	100	99.737	ENSCHIG00000014969	DDB1	100	99.737	Capra_hircus
ENSOCUG00000001667	DDB1	100	99.123	ENSTSYG00000008027	DDB1	100	99.123	Carlito_syrichta
ENSOCUG00000001667	DDB1	98	99.106	ENSCAPG00000010786	DDB1	100	99.106	Cavia_aperea
ENSOCUG00000001667	DDB1	100	99.123	ENSCPOG00000009956	DDB1	100	99.123	Cavia_porcellus
ENSOCUG00000001667	DDB1	100	99.825	ENSCCAG00000035883	DDB1	100	99.825	Cebus_capucinus
ENSOCUG00000001667	DDB1	100	97.396	ENSCATG00000044495	DDB1	100	97.396	Cercocebus_atys
ENSOCUG00000001667	DDB1	100	99.211	ENSCLAG00000004126	DDB1	100	99.211	Chinchilla_lanigera
ENSOCUG00000001667	DDB1	100	99.825	ENSCSAG00000006392	DDB1	100	99.825	Chlorocebus_sabaeus
ENSOCUG00000001667	DDB1	88	92.614	ENSCHOG00000011377	DDB1	90	92.614	Choloepus_hoffmanni
ENSOCUG00000001667	DDB1	100	97.632	ENSCPBG00000017728	DDB1	100	97.632	Chrysemys_picta_bellii
ENSOCUG00000001667	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSOCUG00000001667	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSOCUG00000001667	DDB1	100	99.825	ENSCANG00000019948	DDB1	100	99.825	Colobus_angolensis_palliatus
ENSOCUG00000001667	DDB1	100	99.825	ENSCGRG00001016599	Ddb1	100	99.825	Cricetulus_griseus_chok1gshd
ENSOCUG00000001667	DDB1	100	99.825	ENSCGRG00000013427	Ddb1	100	99.825	Cricetulus_griseus_crigri
ENSOCUG00000001667	DDB1	93	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSOCUG00000001667	DDB1	94	91.426	ENSCVAG00000019531	ddb1	99	91.426	Cyprinodon_variegatus
ENSOCUG00000001667	DDB1	100	88.441	ENSDARG00000074431	ddb1	100	88.559	Danio_rerio
ENSOCUG00000001667	DDB1	94	99.349	ENSDNOG00000014884	DDB1	97	99.349	Dasypus_novemcinctus
ENSOCUG00000001667	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSOCUG00000001667	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSOCUG00000001667	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSOCUG00000001667	DDB1	78	85.039	ENSEBUG00000014593	ddb1	97	85.039	Eptatretus_burgeri
ENSOCUG00000001667	DDB1	100	99.737	ENSEASG00005008184	DDB1	100	99.737	Equus_asinus_asinus
ENSOCUG00000001667	DDB1	100	99.649	ENSECAG00000012136	DDB1	100	99.649	Equus_caballus
ENSOCUG00000001667	DDB1	85	97.643	ENSEEUG00000003194	DDB1	85	97.643	Erinaceus_europaeus
ENSOCUG00000001667	DDB1	100	91.140	ENSELUG00000023868	ddb1	100	91.140	Esox_lucius
ENSOCUG00000001667	DDB1	100	99.912	ENSFCAG00000029716	DDB1	100	99.912	Felis_catus
ENSOCUG00000001667	DDB1	100	97.025	ENSFALG00000011981	DDB1	100	97.025	Ficedula_albicollis
ENSOCUG00000001667	DDB1	100	99.123	ENSFDAG00000005128	DDB1	100	99.123	Fukomys_damarensis
ENSOCUG00000001667	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.670	Fundulus_heteroclitus
ENSOCUG00000001667	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSOCUG00000001667	DDB1	100	97.018	ENSGALG00000042333	DDB1	100	97.018	Gallus_gallus
ENSOCUG00000001667	DDB1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSOCUG00000001667	DDB1	96	90.559	ENSGACG00000017182	ddb1	100	90.559	Gasterosteus_aculeatus
ENSOCUG00000001667	DDB1	95	97.694	ENSGAGG00000014124	DDB1	100	97.694	Gopherus_agassizii
ENSOCUG00000001667	DDB1	100	99.825	ENSGGOG00000004052	DDB1	100	99.825	Gorilla_gorilla
ENSOCUG00000001667	DDB1	100	91.404	ENSHBUG00000008873	ddb1	100	91.404	Haplochromis_burtoni
ENSOCUG00000001667	DDB1	100	99.035	ENSHGLG00000018430	DDB1	100	99.035	Heterocephalus_glaber_female
ENSOCUG00000001667	DDB1	100	97.982	ENSHGLG00100014475	DDB1	100	97.982	Heterocephalus_glaber_male
ENSOCUG00000001667	DDB1	94	90.985	ENSHCOG00000018670	ddb1	98	90.985	Hippocampus_comes
ENSOCUG00000001667	DDB1	100	90.439	ENSIPUG00000005612	DDB1	100	90.439	Ictalurus_punctatus
ENSOCUG00000001667	DDB1	100	99.825	ENSSTOG00000007552	DDB1	100	99.825	Ictidomys_tridecemlineatus
ENSOCUG00000001667	DDB1	100	99.649	ENSJJAG00000017769	Ddb1	100	99.649	Jaculus_jaculus
ENSOCUG00000001667	DDB1	94	91.333	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSOCUG00000001667	DDB1	85	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSOCUG00000001667	DDB1	100	93.695	ENSLACG00000017611	DDB1	100	93.695	Latimeria_chalumnae
ENSOCUG00000001667	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSOCUG00000001667	DDB1	100	99.649	ENSLAFG00000011513	DDB1	100	99.649	Loxodonta_africana
ENSOCUG00000001667	DDB1	100	99.825	ENSMFAG00000042035	DDB1	100	99.825	Macaca_fascicularis
ENSOCUG00000001667	DDB1	99	99.823	ENSMMUG00000002691	DDB1	99	99.823	Macaca_mulatta
ENSOCUG00000001667	DDB1	100	99.825	ENSMNEG00000031559	DDB1	100	99.825	Macaca_nemestrina
ENSOCUG00000001667	DDB1	100	99.825	ENSMLEG00000044136	DDB1	100	99.825	Mandrillus_leucophaeus
ENSOCUG00000001667	DDB1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSOCUG00000001667	DDB1	100	91.316	ENSMZEG00005013835	ddb1	100	91.316	Maylandia_zebra
ENSOCUG00000001667	DDB1	94	96.555	ENSMGAG00000004990	DDB1	100	96.555	Meleagris_gallopavo
ENSOCUG00000001667	DDB1	100	99.825	ENSMAUG00000012926	Ddb1	100	99.825	Mesocricetus_auratus
ENSOCUG00000001667	DDB1	100	99.825	ENSMICG00000013703	DDB1	100	99.825	Microcebus_murinus
ENSOCUG00000001667	DDB1	100	99.561	ENSMOCG00000020499	Ddb1	100	99.561	Microtus_ochrogaster
ENSOCUG00000001667	DDB1	86	91.837	ENSMMOG00000001758	ddb1	99	91.837	Mola_mola
ENSOCUG00000001667	DDB1	100	89.360	ENSMODG00000020353	DDB1	100	89.360	Monodelphis_domestica
ENSOCUG00000001667	DDB1	100	91.404	ENSMALG00000014071	ddb1	100	91.404	Monopterus_albus
ENSOCUG00000001667	DDB1	100	99.737	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.737	Mus_caroli
ENSOCUG00000001667	DDB1	100	99.649	ENSMUSG00000024740	Ddb1	100	99.649	Mus_musculus
ENSOCUG00000001667	DDB1	100	99.737	MGP_PahariEiJ_G0014189	Ddb1	100	99.737	Mus_pahari
ENSOCUG00000001667	DDB1	100	99.737	MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	Mus_spretus
ENSOCUG00000001667	DDB1	100	96.579	ENSMPUG00000014200	DDB1	100	96.579	Mustela_putorius_furo
ENSOCUG00000001667	DDB1	100	99.298	ENSMLUG00000013232	DDB1	100	99.298	Myotis_lucifugus
ENSOCUG00000001667	DDB1	100	99.386	ENSNGAG00000009384	Ddb1	100	99.386	Nannospalax_galili
ENSOCUG00000001667	DDB1	100	91.491	ENSNBRG00000019581	ddb1	100	91.491	Neolamprologus_brichardi
ENSOCUG00000001667	DDB1	100	96.788	ENSNLEG00000002022	DDB1	100	96.788	Nomascus_leucogenys
ENSOCUG00000001667	DDB1	91	99.296	ENSMEUG00000001099	DDB1	93	99.296	Notamacropus_eugenii
ENSOCUG00000001667	DDB1	90	90.980	ENSOPRG00000008254	DDB1	90	90.980	Ochotona_princeps
ENSOCUG00000001667	DDB1	100	99.035	ENSODEG00000002419	DDB1	100	99.035	Octodon_degus
ENSOCUG00000001667	DDB1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSOCUG00000001667	DDB1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSOCUG00000001667	DDB1	96	89.918	ENSORLG00000001399	ddb1	98	91.162	Oryzias_latipes
ENSOCUG00000001667	DDB1	96	89.826	ENSORLG00020001277	ddb1	97	89.826	Oryzias_latipes_hni
ENSOCUG00000001667	DDB1	94	90.977	ENSORLG00015002080	ddb1	99	90.977	Oryzias_latipes_hsok
ENSOCUG00000001667	DDB1	96	89.790	ENSOMEG00000006181	ddb1	99	89.790	Oryzias_melastigma
ENSOCUG00000001667	DDB1	100	99.649	ENSOGAG00000016103	DDB1	100	99.649	Otolemur_garnettii
ENSOCUG00000001667	DDB1	99	99.733	ENSOARG00000011716	DDB1	98	99.733	Ovis_aries
ENSOCUG00000001667	DDB1	100	99.825	ENSPPAG00000035343	DDB1	100	99.825	Pan_paniscus
ENSOCUG00000001667	DDB1	100	99.912	ENSPPRG00000013300	DDB1	100	99.912	Panthera_pardus
ENSOCUG00000001667	DDB1	98	99.911	ENSPTIG00000006909	DDB1	98	99.911	Panthera_tigris_altaica
ENSOCUG00000001667	DDB1	100	99.825	ENSPTRG00000003737	DDB1	100	99.825	Pan_troglodytes
ENSOCUG00000001667	DDB1	100	99.825	ENSPANG00000000242	DDB1	100	99.825	Papio_anubis
ENSOCUG00000001667	DDB1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSOCUG00000001667	DDB1	98	96.975	ENSPSIG00000013275	DDB1	100	96.975	Pelodiscus_sinensis
ENSOCUG00000001667	DDB1	86	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSOCUG00000001667	DDB1	100	99.825	ENSPEMG00000012241	Ddb1	100	99.825	Peromyscus_maniculatus_bairdii
ENSOCUG00000001667	DDB1	89	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSOCUG00000001667	DDB1	100	98.947	ENSPCIG00000002643	DDB1	100	98.947	Phascolarctos_cinereus
ENSOCUG00000001667	DDB1	100	90.973	ENSPFOG00000002768	ddb1	100	90.973	Poecilia_formosa
ENSOCUG00000001667	DDB1	100	90.789	ENSPLAG00000017227	ddb1	100	90.789	Poecilia_latipinna
ENSOCUG00000001667	DDB1	100	90.789	ENSPMEG00000011398	ddb1	100	90.789	Poecilia_mexicana
ENSOCUG00000001667	DDB1	94	91.349	ENSPREG00000004440	ddb1	98	91.349	Poecilia_reticulata
ENSOCUG00000001667	DDB1	100	95.026	ENSPPYG00000003193	DDB1	100	95.026	Pongo_abelii
ENSOCUG00000001667	DDB1	85	99.403	ENSPCAG00000011040	DDB1	85	99.403	Procavia_capensis
ENSOCUG00000001667	DDB1	100	98.336	ENSPCOG00000015176	DDB1	100	98.336	Propithecus_coquereli
ENSOCUG00000001667	DDB1	100	99.737	ENSPVAG00000003847	DDB1	100	99.737	Pteropus_vampyrus
ENSOCUG00000001667	DDB1	94	91.333	ENSPNAG00000006635	ddb1	97	91.333	Pygocentrus_nattereri
ENSOCUG00000001667	DDB1	100	99.737	ENSRNOG00000020715	Ddb1	100	99.737	Rattus_norvegicus
ENSOCUG00000001667	DDB1	100	99.825	ENSRBIG00000033611	DDB1	100	99.825	Rhinopithecus_bieti
ENSOCUG00000001667	DDB1	100	99.825	ENSRROG00000041407	DDB1	100	99.825	Rhinopithecus_roxellana
ENSOCUG00000001667	DDB1	100	99.737	ENSSBOG00000019775	DDB1	100	99.737	Saimiri_boliviensis_boliviensis
ENSOCUG00000001667	DDB1	94	96.916	ENSSHAG00000011600	DDB1	100	96.916	Sarcophilus_harrisii
ENSOCUG00000001667	DDB1	94	91.450	ENSSFOG00015011151	ddb1	97	91.450	Scleropages_formosus
ENSOCUG00000001667	DDB1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSOCUG00000001667	DDB1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSOCUG00000001667	DDB1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSOCUG00000001667	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSOCUG00000001667	DDB1	100	97.807	ENSSPUG00000019338	DDB1	100	97.807	Sphenodon_punctatus
ENSOCUG00000001667	DDB1	94	91.628	ENSSPAG00000009888	ddb1	99	91.628	Stegastes_partitus
ENSOCUG00000001667	DDB1	100	98.947	ENSSSCG00000013094	DDB1	100	98.947	Sus_scrofa
ENSOCUG00000001667	DDB1	100	97.193	ENSTGUG00000006414	DDB1	100	97.193	Taeniopygia_guttata
ENSOCUG00000001667	DDB1	94	90.308	ENSTRUG00000016682	ddb1	98	90.308	Takifugu_rubripes
ENSOCUG00000001667	DDB1	88	85.130	ENSTNIG00000009565	ddb1	99	85.130	Tetraodon_nigroviridis
ENSOCUG00000001667	DDB1	92	94.778	ENSTTRG00000011055	DDB1	94	94.778	Tursiops_truncatus
ENSOCUG00000001667	DDB1	94	99.721	ENSUAMG00000017793	DDB1	93	99.721	Ursus_americanus
ENSOCUG00000001667	DDB1	94	99.721	ENSUMAG00000011788	DDB1	98	99.721	Ursus_maritimus
ENSOCUG00000001667	DDB1	90	99.020	ENSVPAG00000007963	DDB1	92	99.020	Vicugna_pacos
ENSOCUG00000001667	DDB1	100	99.825	ENSVVUG00000004987	DDB1	100	99.825	Vulpes_vulpes
ENSOCUG00000001667	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSOCUG00000001667	DDB1	86	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSOCUG00000001667	DDB1	94	91.240	ENSXMAG00000000022	ddb1	99	91.240	Xiphophorus_maculatus