EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000001889 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 24221 bases
Position: chrGL018781:653674-677894
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019910	CSD	PF00313.22	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000030085	YBX3-201	1335	-	ENSOCUP00000019910	345 (aa)	-	G1TS97

Gene Model

Click here to download ENSOCUG00000001889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000001889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000001889	YBX3	85	87.119	ENSG00000060138	YBX3	91	96.429	Homo_sapiens
ENSOCUG00000001889	YBX3	84	90.311	ENSAMEG00000009393	YBX3	83	90.345	Ailuropoda_melanoleuca
ENSOCUG00000001889	YBX3	81	65.248	ENSAPLG00000003147	YBX3	95	66.912	Anas_platyrhynchos
ENSOCUG00000001889	YBX3	85	86.780	ENSANAG00000024492	-	93	87.119	Aotus_nancymaae
ENSOCUG00000001889	YBX3	88	86.469	ENSBTAG00000009663	YBX3	78	84.014	Bos_taurus
ENSOCUG00000001889	YBX3	56	91.139	ENSCJAG00000033824	-	71	90.411	Callithrix_jacchus
ENSOCUG00000001889	YBX3	85	87.458	ENSCJAG00000021660	-	80	87.797	Callithrix_jacchus
ENSOCUG00000001889	YBX3	81	90.747	ENSCAFG00000013401	YBX3	84	89.474	Canis_familiaris
ENSOCUG00000001889	YBX3	85	86.644	ENSCAFG00020006412	YBX3	78	86.735	Canis_lupus_dingo
ENSOCUG00000001889	YBX3	88	86.469	ENSCHIG00000010863	YBX3	82	87.075	Capra_hircus
ENSOCUG00000001889	YBX3	99	46.974	ENSTSYG00000035821	-	72	76.786	Carlito_syrichta
ENSOCUG00000001889	YBX3	83	89.199	ENSTSYG00000004204	-	88	89.547	Carlito_syrichta
ENSOCUG00000001889	YBX3	81	84.698	ENSCAPG00000015039	YBX3	88	87.085	Cavia_aperea
ENSOCUG00000001889	YBX3	85	84.300	ENSCPOG00000011329	YBX3	86	84.300	Cavia_porcellus
ENSOCUG00000001889	YBX3	85	86.441	ENSCCAG00000016469	YBX3	79	86.780	Cebus_capucinus
ENSOCUG00000001889	YBX3	85	86.441	ENSCATG00000034411	YBX3	79	86.780	Cercocebus_atys
ENSOCUG00000001889	YBX3	81	86.833	ENSCLAG00000016030	YBX3	89	89.299	Chinchilla_lanigera
ENSOCUG00000001889	YBX3	85	86.780	ENSCSAG00000008744	YBX3	79	87.119	Chlorocebus_sabaeus
ENSOCUG00000001889	YBX3	84	75.258	ENSCPBG00000014147	YBX3	81	75.342	Chrysemys_picta_bellii
ENSOCUG00000001889	YBX3	85	86.780	ENSCANG00000036801	YBX3	94	87.119	Colobus_angolensis_palliatus
ENSOCUG00000001889	YBX3	88	88.079	ENSCGRG00001016148	Ybx3	81	88.435	Cricetulus_griseus_chok1gshd
ENSOCUG00000001889	YBX3	83	86.942	ENSCGRG00000004563	Ybx3	98	86.942	Cricetulus_griseus_crigri
ENSOCUG00000001889	YBX3	81	89.680	ENSDORG00000009103	Ybx3	81	88.462	Dipodomys_ordii
ENSOCUG00000001889	YBX3	81	79.930	ENSETEG00000002557	YBX3	95	80.147	Echinops_telfairi
ENSOCUG00000001889	YBX3	85	83.673	ENSEASG00005014726	YBX3	71	94.340	Equus_asinus_asinus
ENSOCUG00000001889	YBX3	85	87.415	ENSECAG00000013777	YBX3	79	87.415	Equus_caballus
ENSOCUG00000001889	YBX3	81	85.461	ENSEEUG00000010415	YBX3	96	88.235	Erinaceus_europaeus
ENSOCUG00000001889	YBX3	85	87.458	ENSFCAG00000027748	YBX3	92	80.523	Felis_catus
ENSOCUG00000001889	YBX3	81	60.563	ENSFALG00000003661	YBX3	95	59.420	Ficedula_albicollis
ENSOCUG00000001889	YBX3	83	81.100	ENSFDAG00000021192	YBX3	93	81.100	Fukomys_damarensis
ENSOCUG00000001889	YBX3	83	56.250	ENSGALG00000031890	YBX3	76	70.536	Gallus_gallus
ENSOCUG00000001889	YBX3	84	74.483	ENSGAGG00000017780	YBX3	81	74.315	Gopherus_agassizii
ENSOCUG00000001889	YBX3	85	87.119	ENSGGOG00000001352	YBX3	79	87.458	Gorilla_gorilla
ENSOCUG00000001889	YBX3	79	75.912	ENSHGLG00000015495	-	80	73.626	Heterocephalus_glaber_female
ENSOCUG00000001889	YBX3	90	70.794	ENSHGLG00000014798	-	93	71.384	Heterocephalus_glaber_female
ENSOCUG00000001889	YBX3	66	90.179	ENSHGLG00100003589	YBX3	81	61.029	Heterocephalus_glaber_male
ENSOCUG00000001889	YBX3	85	85.714	ENSSTOG00000032577	-	83	84.014	Ictidomys_tridecemlineatus
ENSOCUG00000001889	YBX3	83	82.168	ENSSTOG00000002108	-	88	82.168	Ictidomys_tridecemlineatus
ENSOCUG00000001889	YBX3	85	63.851	ENSJJAG00000014239	Ybx3	96	65.909	Jaculus_jaculus
ENSOCUG00000001889	YBX3	94	85.460	ENSLAFG00000017247	YBX3	98	85.196	Loxodonta_africana
ENSOCUG00000001889	YBX3	85	86.780	ENSMFAG00000039369	YBX3	79	87.119	Macaca_fascicularis
ENSOCUG00000001889	YBX3	85	86.780	ENSMMUG00000022469	YBX3	91	87.119	Macaca_mulatta
ENSOCUG00000001889	YBX3	85	86.780	ENSMNEG00000045109	YBX3	79	87.119	Macaca_nemestrina
ENSOCUG00000001889	YBX3	83	88.112	ENSMLEG00000033618	YBX3	81	88.112	Mandrillus_leucophaeus
ENSOCUG00000001889	YBX3	83	61.538	ENSMGAG00000014224	YBX3	100	69.643	Meleagris_gallopavo
ENSOCUG00000001889	YBX3	94	83.901	ENSMAUG00000012185	Ybx3	92	87.755	Mesocricetus_auratus
ENSOCUG00000001889	YBX3	72	83.146	ENSMICG00000031459	-	78	82.857	Microcebus_murinus
ENSOCUG00000001889	YBX3	85	91.438	ENSMICG00000038002	-	79	91.156	Microcebus_murinus
ENSOCUG00000001889	YBX3	88	88.079	ENSMOCG00000016291	Ybx3	96	88.435	Microtus_ochrogaster
ENSOCUG00000001889	YBX3	83	80.139	ENSMODG00000018248	YBX3	91	80.139	Monodelphis_domestica
ENSOCUG00000001889	YBX3	88	87.748	MGP_CAROLIEiJ_G0028947	Ybx3	81	88.095	Mus_caroli
ENSOCUG00000001889	YBX3	88	87.748	ENSMUSG00000030189	Ybx3	81	88.095	Mus_musculus
ENSOCUG00000001889	YBX3	88	88.411	MGP_PahariEiJ_G0022709	Ybx3	81	88.776	Mus_pahari
ENSOCUG00000001889	YBX3	88	88.079	MGP_SPRETEiJ_G0029994	Ybx3	81	88.435	Mus_spretus
ENSOCUG00000001889	YBX3	85	74.751	ENSMPUG00000011810	YBX3	80	74.587	Mustela_putorius_furo
ENSOCUG00000001889	YBX3	76	93.258	ENSMLUG00000007476	YBX3	99	91.011	Myotis_lucifugus
ENSOCUG00000001889	YBX3	85	85.235	ENSNGAG00000000710	Ybx3	88	86.486	Nannospalax_galili
ENSOCUG00000001889	YBX3	85	84.746	ENSNLEG00000034844	YBX3	84	83.390	Nomascus_leucogenys
ENSOCUG00000001889	YBX3	86	80.339	ENSODEG00000017957	YBX3	87	80.612	Octodon_degus
ENSOCUG00000001889	YBX3	87	87.582	ENSOGAG00000013245	YBX3	80	87.708	Otolemur_garnettii
ENSOCUG00000001889	YBX3	86	78.114	ENSOARG00000020919	YBX3	99	76.174	Ovis_aries
ENSOCUG00000001889	YBX3	85	87.372	ENSPPAG00000039068	YBX3	87	84.345	Pan_paniscus
ENSOCUG00000001889	YBX3	85	87.797	ENSPPRG00000005859	YBX3	92	80.814	Panthera_pardus
ENSOCUG00000001889	YBX3	81	90.747	ENSPTIG00000005322	YBX3	81	89.510	Panthera_tigris_altaica
ENSOCUG00000001889	YBX3	85	87.119	ENSPTRG00000004681	YBX3	79	87.458	Pan_troglodytes
ENSOCUG00000001889	YBX3	85	86.441	ENSPANG00000010280	YBX3	79	86.780	Papio_anubis
ENSOCUG00000001889	YBX3	57	82.955	ENSPSIG00000009247	YBX3	88	91.026	Pelodiscus_sinensis
ENSOCUG00000001889	YBX3	75	88.393	ENSPEMG00000010391	-	74	90.667	Peromyscus_maniculatus_bairdii
ENSOCUG00000001889	YBX3	88	88.411	ENSPEMG00000012132	-	92	88.776	Peromyscus_maniculatus_bairdii
ENSOCUG00000001889	YBX3	75	83.398	ENSPCIG00000029949	YBX3	100	83.398	Phascolarctos_cinereus
ENSOCUG00000001889	YBX3	85	86.780	ENSPPYG00000004279	YBX3	80	87.119	Pongo_abelii
ENSOCUG00000001889	YBX3	62	85.581	ENSPCAG00000001397	YBX3	72	85.167	Procavia_capensis
ENSOCUG00000001889	YBX3	53	82.514	ENSPCOG00000011663	YBX3	71	83.060	Propithecus_coquereli
ENSOCUG00000001889	YBX3	87	73.000	ENSPVAG00000006740	YBX3	56	87.560	Pteropus_vampyrus
ENSOCUG00000001889	YBX3	88	88.411	ENSRNOG00000005480	Ybx3	81	88.776	Rattus_norvegicus
ENSOCUG00000001889	YBX3	85	87.031	ENSRBIG00000039208	YBX3	80	87.119	Rhinopithecus_bieti
ENSOCUG00000001889	YBX3	85	86.780	ENSRROG00000029638	YBX3	80	87.119	Rhinopithecus_roxellana
ENSOCUG00000001889	YBX3	84	87.889	ENSSBOG00000030573	YBX3	83	88.462	Saimiri_boliviensis_boliviensis
ENSOCUG00000001889	YBX3	81	77.083	ENSSHAG00000003262	YBX3	93	79.496	Sarcophilus_harrisii
ENSOCUG00000001889	YBX3	84	88.276	ENSSSCG00000000633	YBX3	77	88.475	Sus_scrofa
ENSOCUG00000001889	YBX3	81	62.898	ENSTGUG00000012047	YBX3	95	64.469	Taeniopygia_guttata
ENSOCUG00000001889	YBX3	89	84.466	ENSTBEG00000012570	YBX3	81	87.755	Tupaia_belangeri
ENSOCUG00000001889	YBX3	76	84.211	ENSTTRG00000008045	YBX3	100	84.962	Tursiops_truncatus
ENSOCUG00000001889	YBX3	74	94.531	ENSUAMG00000016662	YBX3	98	90.037	Ursus_americanus
ENSOCUG00000001889	YBX3	81	90.747	ENSUMAG00000016118	YBX3	94	89.510	Ursus_maritimus
ENSOCUG00000001889	YBX3	81	62.766	ENSVPAG00000000876	YBX3	96	64.706	Vicugna_pacos
ENSOCUG00000001889	YBX3	73	95.219	ENSVVUG00000004956	YBX3	93	95.219	Vulpes_vulpes
ENSOCUG00000001889	YBX3	83	53.716	ENSXETG00000016239	ybx3	99	48.148	Xenopus_tropicalis