EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000002353 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 17264 bases
Position: chr13:136973220-136990483
Accession: 103350331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002030	RRM_1	PF00076.22	1.5e-21	1	2
ENSOCUP00000002030	RRM_1	PF00076.22	1.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000002351	-	1095	XM_008265927	ENSOCUP00000002030	285 (aa)	XP_008264149	G1SHC8

Gene Model

Click here to download ENSOCUG00000002353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000002353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000002353	-	100	76.736	ENSOCUG00000011704	-	100	76.736
ENSOCUG00000002353	-	57	30.994	ENSOCUG00000010919	PABPC5	64	31.073
ENSOCUG00000002353	-	89	58.140	ENSOCUG00000006834	-	100	58.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000002353	-	100	77.778	ENSG00000180098	TRNAU1AP	100	77.778	Homo_sapiens
ENSOCUG00000002353	-	98	49.505	ENSAPOG00000007148	TRNAU1AP	98	49.835	Acanthochromis_polyacanthus
ENSOCUG00000002353	-	100	77.431	ENSAMEG00000011367	TRNAU1AP	100	77.431	Ailuropoda_melanoleuca
ENSOCUG00000002353	-	91	59.770	ENSACIG00000004161	trnau1apa	93	59.770	Amphilophus_citrinellus
ENSOCUG00000002353	-	98	49.502	ENSAOCG00000008056	trnau1apa	98	49.834	Amphiprion_ocellaris
ENSOCUG00000002353	-	98	49.502	ENSAPEG00000008868	trnau1apa	98	49.834	Amphiprion_percula
ENSOCUG00000002353	-	98	47.910	ENSATEG00000012140	trnau1apa	98	47.910	Anabas_testudineus
ENSOCUG00000002353	-	94	72.325	ENSAPLG00000002606	TRNAU1AP	99	72.325	Anas_platyrhynchos
ENSOCUG00000002353	-	99	55.932	ENSACAG00000003995	-	99	57.143	Anolis_carolinensis
ENSOCUG00000002353	-	67	41.451	ENSACAG00000004205	-	73	41.451	Anolis_carolinensis
ENSOCUG00000002353	-	100	77.778	ENSANAG00000018976	TRNAU1AP	100	77.778	Aotus_nancymaae
ENSOCUG00000002353	-	98	50.000	ENSACLG00000018515	trnau1apa	98	50.000	Astatotilapia_calliptera
ENSOCUG00000002353	-	95	51.971	ENSAMXG00000013750	trnau1apa	90	51.971	Astyanax_mexicanus
ENSOCUG00000002353	-	94	53.333	ENSAMXG00000029240	-	96	53.333	Astyanax_mexicanus
ENSOCUG00000002353	-	100	77.431	ENSBTAG00000010393	TRNAU1AP	100	77.431	Bos_taurus
ENSOCUG00000002353	-	100	77.778	ENSCJAG00000009717	TRNAU1AP	100	77.778	Callithrix_jacchus
ENSOCUG00000002353	-	100	77.431	ENSCAFG00000011735	TRNAU1AP	100	77.431	Canis_familiaris
ENSOCUG00000002353	-	100	77.431	ENSCAFG00020023584	TRNAU1AP	100	77.431	Canis_lupus_dingo
ENSOCUG00000002353	-	100	77.083	ENSCHIG00000023215	TRNAU1AP	100	77.083	Capra_hircus
ENSOCUG00000002353	-	100	77.431	ENSTSYG00000003506	TRNAU1AP	100	77.431	Carlito_syrichta
ENSOCUG00000002353	-	100	77.083	ENSCPOG00000001925	TRNAU1AP	100	77.083	Cavia_porcellus
ENSOCUG00000002353	-	100	77.778	ENSCCAG00000037506	TRNAU1AP	100	77.778	Cebus_capucinus
ENSOCUG00000002353	-	100	77.431	ENSCATG00000044617	TRNAU1AP	100	77.431	Cercocebus_atys
ENSOCUG00000002353	-	100	76.389	ENSCLAG00000008223	TRNAU1AP	100	76.389	Chinchilla_lanigera
ENSOCUG00000002353	-	100	77.431	ENSCSAG00000001014	TRNAU1AP	100	77.431	Chlorocebus_sabaeus
ENSOCUG00000002353	-	95	74.182	ENSCPBG00000000121	TRNAU1AP	100	74.182	Chrysemys_picta_bellii
ENSOCUG00000002353	-	60	47.368	ENSCSAVG00000011781	-	90	47.368	Ciona_savignyi
ENSOCUG00000002353	-	100	65.972	ENSCANG00000041949	TRNAU1AP	100	73.034	Colobus_angolensis_palliatus
ENSOCUG00000002353	-	100	77.083	ENSCGRG00001004713	Trnau1ap	100	77.083	Cricetulus_griseus_chok1gshd
ENSOCUG00000002353	-	100	77.083	ENSCGRG00000014532	Trnau1ap	100	77.083	Cricetulus_griseus_crigri
ENSOCUG00000002353	-	98	50.667	ENSCSEG00000006663	trnau1apa	95	51.000	Cynoglossus_semilaevis
ENSOCUG00000002353	-	96	46.575	ENSCVAG00000018069	trnau1apa	94	47.955	Cyprinodon_variegatus
ENSOCUG00000002353	-	95	47.842	ENSDARG00000101323	trnau1apa	88	47.842	Danio_rerio
ENSOCUG00000002353	-	62	75.000	ENSDNOG00000047959	-	91	75.000	Dasypus_novemcinctus
ENSOCUG00000002353	-	100	77.431	ENSDNOG00000033009	TRNAU1AP	100	77.431	Dasypus_novemcinctus
ENSOCUG00000002353	-	99	71.127	ENSDORG00000006349	Trnau1ap	99	73.043	Dipodomys_ordii
ENSOCUG00000002353	-	60	49.711	FBgn0031607	CG15440	51	49.711	Drosophila_melanogaster
ENSOCUG00000002353	-	85	74.797	ENSETEG00000012594	TRNAU1AP	100	74.797	Echinops_telfairi
ENSOCUG00000002353	-	100	77.778	ENSEASG00005010062	TRNAU1AP	100	77.778	Equus_asinus_asinus
ENSOCUG00000002353	-	100	77.778	ENSECAG00000012980	TRNAU1AP	100	77.778	Equus_caballus
ENSOCUG00000002353	-	96	60.000	ENSELUG00000022790	-	94	45.205	Esox_lucius
ENSOCUG00000002353	-	96	54.167	ENSELUG00000017686	trnau1apa	94	53.633	Esox_lucius
ENSOCUG00000002353	-	100	77.778	ENSFCAG00000013401	TRNAU1AP	100	77.778	Felis_catus
ENSOCUG00000002353	-	95	73.091	ENSFALG00000001371	TRNAU1AP	100	73.091	Ficedula_albicollis
ENSOCUG00000002353	-	100	76.389	ENSFDAG00000018599	TRNAU1AP	100	76.389	Fukomys_damarensis
ENSOCUG00000002353	-	60	62.500	ENSFHEG00000018232	trnau1apa	59	62.500	Fundulus_heteroclitus
ENSOCUG00000002353	-	71	78.125	ENSGMOG00000016508	trnau1apa	93	46.809	Gadus_morhua
ENSOCUG00000002353	-	100	74.653	ENSGALG00000001310	-	100	74.653	Gallus_gallus
ENSOCUG00000002353	-	67	41.429	ENSGALG00000012721	C2H6orf52	95	35.361	Gallus_gallus
ENSOCUG00000002353	-	60	63.743	ENSGAFG00000004928	trnau1apa	64	63.743	Gambusia_affinis
ENSOCUG00000002353	-	98	51.195	ENSGACG00000001443	trnau1apa	95	51.195	Gasterosteus_aculeatus
ENSOCUG00000002353	-	95	74.182	ENSGAGG00000004940	TRNAU1AP	100	74.182	Gopherus_agassizii
ENSOCUG00000002353	-	100	77.778	ENSGGOG00000003511	TRNAU1AP	100	77.778	Gorilla_gorilla
ENSOCUG00000002353	-	98	49.175	ENSHBUG00000002510	trnau1apa	98	49.175	Haplochromis_burtoni
ENSOCUG00000002353	-	100	76.389	ENSHGLG00000010380	TRNAU1AP	100	76.389	Heterocephalus_glaber_female
ENSOCUG00000002353	-	100	73.958	ENSHGLG00100012699	TRNAU1AP	100	73.958	Heterocephalus_glaber_male
ENSOCUG00000002353	-	99	47.855	ENSHCOG00000014770	trnau1apa	97	47.855	Hippocampus_comes
ENSOCUG00000002353	-	100	77.778	ENSSTOG00000000079	TRNAU1AP	100	77.778	Ictidomys_tridecemlineatus
ENSOCUG00000002353	-	100	77.083	ENSJJAG00000010128	Trnau1ap	100	77.083	Jaculus_jaculus
ENSOCUG00000002353	-	95	48.789	ENSKMAG00000001230	trnau1apa	93	48.789	Kryptolebias_marmoratus
ENSOCUG00000002353	-	95	50.340	ENSLBEG00000011683	trnau1apa	93	51.361	Labrus_bergylta
ENSOCUG00000002353	-	99	54.895	ENSLACG00000005541	TRNAU1AP	99	54.895	Latimeria_chalumnae
ENSOCUG00000002353	-	99	55.944	ENSLOCG00000004041	trnau1apa	99	55.944	Lepisosteus_oculatus
ENSOCUG00000002353	-	100	77.778	ENSLAFG00000007628	TRNAU1AP	100	77.778	Loxodonta_africana
ENSOCUG00000002353	-	100	77.431	ENSMFAG00000043751	TRNAU1AP	100	77.431	Macaca_fascicularis
ENSOCUG00000002353	-	100	77.431	ENSMMUG00000006561	TRNAU1AP	100	77.431	Macaca_mulatta
ENSOCUG00000002353	-	100	77.431	ENSMNEG00000044201	TRNAU1AP	100	77.431	Macaca_nemestrina
ENSOCUG00000002353	-	100	77.431	ENSMLEG00000015649	TRNAU1AP	100	77.431	Mandrillus_leucophaeus
ENSOCUG00000002353	-	98	50.345	ENSMAMG00000001247	trnau1apa	98	51.049	Mastacembelus_armatus
ENSOCUG00000002353	-	98	50.000	ENSMZEG00005017722	trnau1apa	98	50.000	Maylandia_zebra
ENSOCUG00000002353	-	97	73.118	ENSMGAG00000002105	TRNAU1AP	100	73.118	Meleagris_gallopavo
ENSOCUG00000002353	-	100	77.431	ENSMICG00000008386	TRNAU1AP	100	77.431	Microcebus_murinus
ENSOCUG00000002353	-	100	76.736	ENSMOCG00000011189	Trnau1ap	100	76.736	Microtus_ochrogaster
ENSOCUG00000002353	-	95	47.101	ENSMMOG00000012107	trnau1apa	95	46.263	Mola_mola
ENSOCUG00000002353	-	100	72.635	ENSMODG00000010927	TRNAU1AP	100	73.958	Monodelphis_domestica
ENSOCUG00000002353	-	96	51.027	ENSMALG00000016778	trnau1apa	94	50.680	Monopterus_albus
ENSOCUG00000002353	-	100	76.736	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	76.736	Mus_caroli
ENSOCUG00000002353	-	100	76.736	ENSMUSG00000028898	Trnau1ap	100	76.736	Mus_musculus
ENSOCUG00000002353	-	100	77.083	MGP_PahariEiJ_G0028896	Trnau1ap	87	98.361	Mus_pahari
ENSOCUG00000002353	-	100	76.389	MGP_SPRETEiJ_G0027544	Trnau1ap	100	76.389	Mus_spretus
ENSOCUG00000002353	-	100	77.083	ENSMPUG00000015511	TRNAU1AP	100	77.083	Mustela_putorius_furo
ENSOCUG00000002353	-	100	77.431	ENSMLUG00000012586	TRNAU1AP	100	77.431	Myotis_lucifugus
ENSOCUG00000002353	-	100	73.649	ENSNGAG00000015881	Trnau1ap	100	75.347	Nannospalax_galili
ENSOCUG00000002353	-	99	46.939	ENSNBRG00000001758	trnau1apa	98	46.667	Neolamprologus_brichardi
ENSOCUG00000002353	-	100	77.778	ENSNLEG00000009822	TRNAU1AP	100	77.778	Nomascus_leucogenys
ENSOCUG00000002353	-	97	70.732	ENSMEUG00000006117	TRNAU1AP	100	72.043	Notamacropus_eugenii
ENSOCUG00000002353	-	52	96.491	ENSOPRG00000007084	-	69	79.348	Ochotona_princeps
ENSOCUG00000002353	-	100	76.736	ENSODEG00000002970	TRNAU1AP	100	76.736	Octodon_degus
ENSOCUG00000002353	-	58	67.073	ENSONIG00000004715	trnau1apa	64	67.073	Oreochromis_niloticus
ENSOCUG00000002353	-	99	53.220	ENSOANG00000005325	-	99	54.355	Ornithorhynchus_anatinus
ENSOCUG00000002353	-	98	48.123	ENSORLG00000010428	trnau1apa	95	48.805	Oryzias_latipes
ENSOCUG00000002353	-	98	48.123	ENSORLG00020000926	trnau1ap	95	48.805	Oryzias_latipes_hni
ENSOCUG00000002353	-	98	48.123	ENSORLG00015009858	trnau1ap	95	48.805	Oryzias_latipes_hsok
ENSOCUG00000002353	-	98	47.782	ENSOMEG00000007873	trnau1apa	95	47.782	Oryzias_melastigma
ENSOCUG00000002353	-	100	77.431	ENSOGAG00000002274	TRNAU1AP	100	77.431	Otolemur_garnettii
ENSOCUG00000002353	-	100	77.083	ENSOARG00000002843	TRNAU1AP	100	77.083	Ovis_aries
ENSOCUG00000002353	-	100	77.778	ENSPPAG00000033927	TRNAU1AP	100	77.778	Pan_paniscus
ENSOCUG00000002353	-	100	77.778	ENSPPRG00000004416	TRNAU1AP	100	77.778	Panthera_pardus
ENSOCUG00000002353	-	100	77.778	ENSPTIG00000016677	TRNAU1AP	100	77.778	Panthera_tigris_altaica
ENSOCUG00000002353	-	93	70.480	ENSPTRG00000000434	-	97	70.480	Pan_troglodytes
ENSOCUG00000002353	-	100	77.431	ENSPANG00000016019	TRNAU1AP	100	77.431	Papio_anubis
ENSOCUG00000002353	-	94	62.766	ENSPKIG00000022205	-	93	62.766	Paramormyrops_kingsleyae
ENSOCUG00000002353	-	95	50.690	ENSPKIG00000015511	trnau1apa	92	50.690	Paramormyrops_kingsleyae
ENSOCUG00000002353	-	95	72.438	ENSPSIG00000006864	TRNAU1AP	100	73.818	Pelodiscus_sinensis
ENSOCUG00000002353	-	94	51.685	ENSPMGG00000023893	trnau1apa	91	51.685	Periophthalmus_magnuspinnatus
ENSOCUG00000002353	-	100	76.736	ENSPEMG00000007877	Trnau1ap	100	76.736	Peromyscus_maniculatus_bairdii
ENSOCUG00000002353	-	61	53.409	ENSPMAG00000000592	trnau1apa	97	53.409	Petromyzon_marinus
ENSOCUG00000002353	-	59	55.952	ENSPMAG00000005934	trnau1apa	75	55.621	Petromyzon_marinus
ENSOCUG00000002353	-	95	47.222	ENSPFOG00000008100	trnau1apa	93	47.569	Poecilia_formosa
ENSOCUG00000002353	-	91	46.570	ENSPLAG00000010236	trnau1apa	93	46.931	Poecilia_latipinna
ENSOCUG00000002353	-	96	46.207	ENSPMEG00000016387	trnau1apa	97	45.246	Poecilia_mexicana
ENSOCUG00000002353	-	93	48.106	ENSPREG00000019821	trnau1apa	94	52.273	Poecilia_reticulata
ENSOCUG00000002353	-	100	58.681	ENSPPYG00000001639	-	98	65.882	Pongo_abelii
ENSOCUG00000002353	-	67	91.525	ENSPCOG00000023470	-	100	60.284	Propithecus_coquereli
ENSOCUG00000002353	-	100	77.431	ENSPCOG00000027712	-	100	77.431	Propithecus_coquereli
ENSOCUG00000002353	-	100	77.778	ENSPVAG00000017214	TRNAU1AP	100	77.778	Pteropus_vampyrus
ENSOCUG00000002353	-	98	57.778	ENSPNYG00000010130	trnau1apa	97	57.778	Pundamilia_nyererei
ENSOCUG00000002353	-	95	47.872	ENSPNAG00000024905	trnau1apa	91	47.872	Pygocentrus_nattereri
ENSOCUG00000002353	-	94	67.279	ENSRNOG00000055344	Trnau1ap	92	67.279	Rattus_norvegicus
ENSOCUG00000002353	-	100	77.778	ENSRBIG00000029083	TRNAU1AP	100	77.778	Rhinopithecus_bieti
ENSOCUG00000002353	-	100	77.778	ENSRROG00000029128	TRNAU1AP	100	77.778	Rhinopithecus_roxellana
ENSOCUG00000002353	-	100	77.778	ENSSBOG00000021299	TRNAU1AP	100	77.778	Saimiri_boliviensis_boliviensis
ENSOCUG00000002353	-	100	72.297	ENSSHAG00000008108	TRNAU1AP	100	73.264	Sarcophilus_harrisii
ENSOCUG00000002353	-	60	64.912	ENSSMAG00000020851	trnau1apa	98	48.562	Scophthalmus_maximus
ENSOCUG00000002353	-	96	50.340	ENSSDUG00000011734	trnau1apa	94	50.680	Seriola_dumerili
ENSOCUG00000002353	-	60	70.588	ENSSLDG00000012101	trnau1apa	92	42.960	Seriola_lalandi_dorsalis
ENSOCUG00000002353	-	97	75.627	ENSSARG00000007536	TRNAU1AP	100	75.627	Sorex_araneus
ENSOCUG00000002353	-	61	59.322	ENSSPUG00000010415	-	100	59.322	Sphenodon_punctatus
ENSOCUG00000002353	-	99	65.424	ENSSPUG00000010400	-	100	66.551	Sphenodon_punctatus
ENSOCUG00000002353	-	98	50.000	ENSSPAG00000005029	trnau1apa	98	48.397	Stegastes_partitus
ENSOCUG00000002353	-	100	77.778	ENSSSCG00000030284	TRNAU1AP	100	77.778	Sus_scrofa
ENSOCUG00000002353	-	67	43.367	ENSTGUG00000005908	-	100	43.367	Taeniopygia_guttata
ENSOCUG00000002353	-	97	73.477	ENSTGUG00000000735	-	100	73.477	Taeniopygia_guttata
ENSOCUG00000002353	-	98	50.167	ENSTRUG00000003352	trnau1apa	98	50.167	Takifugu_rubripes
ENSOCUG00000002353	-	98	49.338	ENSTNIG00000006129	trnau1apa	98	49.338	Tetraodon_nigroviridis
ENSOCUG00000002353	-	85	69.919	ENSTBEG00000008049	-	100	69.919	Tupaia_belangeri
ENSOCUG00000002353	-	100	77.431	ENSTTRG00000001854	TRNAU1AP	100	77.431	Tursiops_truncatus
ENSOCUG00000002353	-	95	76.364	ENSUAMG00000008789	TRNAU1AP	100	76.364	Ursus_americanus
ENSOCUG00000002353	-	100	77.431	ENSUMAG00000011068	TRNAU1AP	100	77.431	Ursus_maritimus
ENSOCUG00000002353	-	100	72.789	ENSVPAG00000006778	TRNAU1AP	100	72.789	Vicugna_pacos
ENSOCUG00000002353	-	99	75.439	ENSVVUG00000012518	TRNAU1AP	93	75.439	Vulpes_vulpes
ENSOCUG00000002353	-	95	47.569	ENSXMAG00000017361	trnau1apa	93	47.917	Xiphophorus_maculatus