EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000002437 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: -
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 14642 bases
Position: chrGL018760:825142-839783
Accession: 2327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002106	zf-CCCH	PF00642.24	2e-19	1	2
ENSOCUP00000002106	zf-CCCH	PF00642.24	2e-19	2	2
ENSOCUP00000002106	zf-CCHC	PF00098.23	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000002436	CPSF4-201	2232	-	ENSOCUP00000002106	384 (aa)	-	G1SHJ8

Gene Model

Click here to download ENSOCUG00000002437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000002437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000002437	CPSF4	70	98.885	ENSG00000160917	CPSF4	100	100.000	Homo_sapiens
ENSOCUG00000002437	CPSF4	70	99.257	ENSAMEG00000006252	CPSF4	100	99.257	Ailuropoda_melanoleuca
ENSOCUG00000002437	CPSF4	70	79.182	ENSACIG00000009248	cpsf4	100	77.407	Amphilophus_citrinellus
ENSOCUG00000002437	CPSF4	70	84.444	ENSAOCG00000019616	cpsf4	100	84.444	Amphiprion_ocellaris
ENSOCUG00000002437	CPSF4	70	84.444	ENSAPEG00000011679	cpsf4	100	84.444	Amphiprion_percula
ENSOCUG00000002437	CPSF4	70	83.824	ENSATEG00000007010	cpsf4	100	83.824	Anabas_testudineus
ENSOCUG00000002437	CPSF4	75	89.199	ENSACAG00000012941	CPSF4	95	89.199	Anolis_carolinensis
ENSOCUG00000002437	CPSF4	70	98.885	ENSANAG00000021360	CPSF4	100	98.885	Aotus_nancymaae
ENSOCUG00000002437	CPSF4	70	83.333	ENSACLG00000010374	cpsf4	100	83.333	Astatotilapia_calliptera
ENSOCUG00000002437	CPSF4	70	84.871	ENSAMXG00000031647	cpsf4	100	85.609	Astyanax_mexicanus
ENSOCUG00000002437	CPSF4	70	88.848	ENSBTAG00000002090	CPSF4	100	88.848	Bos_taurus
ENSOCUG00000002437	CPSF4	70	98.885	ENSCJAG00000015826	CPSF4	100	98.885	Callithrix_jacchus
ENSOCUG00000002437	CPSF4	70	98.885	ENSCAFG00000015036	CPSF4	100	98.885	Canis_familiaris
ENSOCUG00000002437	CPSF4	70	92.565	ENSCAFG00020014462	CPSF4	100	92.565	Canis_lupus_dingo
ENSOCUG00000002437	CPSF4	70	98.513	ENSCHIG00000014313	CPSF4	100	98.513	Capra_hircus
ENSOCUG00000002437	CPSF4	70	89.219	ENSTSYG00000005712	-	100	89.219	Carlito_syrichta
ENSOCUG00000002437	CPSF4	63	82.158	ENSTSYG00000008195	-	99	79.200	Carlito_syrichta
ENSOCUG00000002437	CPSF4	70	81.481	ENSTSYG00000014604	-	100	78.889	Carlito_syrichta
ENSOCUG00000002437	CPSF4	57	99.083	ENSCAPG00000013881	CPSF4	87	99.083	Cavia_aperea
ENSOCUG00000002437	CPSF4	70	89.963	ENSCPOG00000001783	CPSF4	100	89.963	Cavia_porcellus
ENSOCUG00000002437	CPSF4	70	98.885	ENSCCAG00000028291	CPSF4	100	98.885	Cebus_capucinus
ENSOCUG00000002437	CPSF4	70	98.885	ENSCATG00000038440	CPSF4	100	98.885	Cercocebus_atys
ENSOCUG00000002437	CPSF4	70	99.628	ENSCLAG00000007050	CPSF4	100	99.628	Chinchilla_lanigera
ENSOCUG00000002437	CPSF4	70	98.885	ENSCSAG00000017795	CPSF4	100	98.885	Chlorocebus_sabaeus
ENSOCUG00000002437	CPSF4	56	95.833	ENSCPBG00000020869	CPSF4	100	95.833	Chrysemys_picta_bellii
ENSOCUG00000002437	CPSF4	68	55.939	ENSCING00000021080	-	97	55.939	Ciona_intestinalis
ENSOCUG00000002437	CPSF4	67	53.546	ENSCSAVG00000011469	-	97	53.546	Ciona_savignyi
ENSOCUG00000002437	CPSF4	70	98.885	ENSCANG00000019384	CPSF4	100	98.885	Colobus_angolensis_palliatus
ENSOCUG00000002437	CPSF4	70	89.963	ENSCGRG00001024184	Cpsf4	100	89.963	Cricetulus_griseus_chok1gshd
ENSOCUG00000002437	CPSF4	70	99.257	ENSCGRG00000013892	Cpsf4	100	99.257	Cricetulus_griseus_crigri
ENSOCUG00000002437	CPSF4	70	83.333	ENSCSEG00000019055	cpsf4	100	83.333	Cynoglossus_semilaevis
ENSOCUG00000002437	CPSF4	70	83.333	ENSCVAG00000016528	cpsf4	100	83.333	Cyprinodon_variegatus
ENSOCUG00000002437	CPSF4	70	85.609	ENSDARG00000020217	cpsf4	100	85.609	Danio_rerio
ENSOCUG00000002437	CPSF4	70	98.885	ENSDNOG00000006344	CPSF4	100	98.885	Dasypus_novemcinctus
ENSOCUG00000002437	CPSF4	57	98.618	ENSDORG00000000742	Cpsf4	100	98.618	Dipodomys_ordii
ENSOCUG00000002437	CPSF4	70	54.795	FBgn0015621	Clp	99	53.425	Drosophila_melanogaster
ENSOCUG00000002437	CPSF4	70	65.169	ENSEBUG00000012552	cpsf4	98	65.169	Eptatretus_burgeri
ENSOCUG00000002437	CPSF4	70	89.963	ENSEASG00005002487	CPSF4	100	89.963	Equus_asinus_asinus
ENSOCUG00000002437	CPSF4	70	99.257	ENSECAG00000007525	CPSF4	100	99.257	Equus_caballus
ENSOCUG00000002437	CPSF4	70	82.482	ENSELUG00000011481	cpsf4	100	80.292	Esox_lucius
ENSOCUG00000002437	CPSF4	70	99.257	ENSFCAG00000015070	CPSF4	100	99.257	Felis_catus
ENSOCUG00000002437	CPSF4	70	85.502	ENSFALG00000013799	CPSF4	100	84.015	Ficedula_albicollis
ENSOCUG00000002437	CPSF4	63	98.354	ENSFDAG00000014092	CPSF4	100	98.354	Fukomys_damarensis
ENSOCUG00000002437	CPSF4	70	82.593	ENSFHEG00000010880	cpsf4	100	82.593	Fundulus_heteroclitus
ENSOCUG00000002437	CPSF4	70	77.491	ENSGMOG00000002330	cpsf4	100	75.547	Gadus_morhua
ENSOCUG00000002437	CPSF4	70	85.502	ENSGALG00000004714	CPSF4	100	84.387	Gallus_gallus
ENSOCUG00000002437	CPSF4	69	38.421	ENSGALG00000004441	-	92	37.368	Gallus_gallus
ENSOCUG00000002437	CPSF4	70	82.222	ENSGAFG00000010580	cpsf4	100	82.222	Gambusia_affinis
ENSOCUG00000002437	CPSF4	70	76.753	ENSGACG00000007792	cpsf4	100	76.015	Gasterosteus_aculeatus
ENSOCUG00000002437	CPSF4	70	95.911	ENSGAGG00000021835	CPSF4	100	95.911	Gopherus_agassizii
ENSOCUG00000002437	CPSF4	70	98.885	ENSGGOG00000015131	CPSF4	100	98.885	Gorilla_gorilla
ENSOCUG00000002437	CPSF4	70	83.333	ENSHBUG00000013699	cpsf4	100	83.333	Haplochromis_burtoni
ENSOCUG00000002437	CPSF4	70	98.155	ENSHGLG00000017150	CPSF4	100	98.155	Heterocephalus_glaber_female
ENSOCUG00000002437	CPSF4	61	96.186	ENSHGLG00100009215	-	100	96.186	Heterocephalus_glaber_male
ENSOCUG00000002437	CPSF4	70	80.370	ENSHCOG00000004397	cpsf4	100	80.370	Hippocampus_comes
ENSOCUG00000002437	CPSF4	70	83.764	ENSIPUG00000017147	cpsf4	100	84.926	Ictalurus_punctatus
ENSOCUG00000002437	CPSF4	70	99.257	ENSSTOG00000001688	CPSF4	100	99.257	Ictidomys_tridecemlineatus
ENSOCUG00000002437	CPSF4	70	99.628	ENSJJAG00000019426	Cpsf4	100	99.628	Jaculus_jaculus
ENSOCUG00000002437	CPSF4	70	81.481	ENSKMAG00000015642	cpsf4	100	81.481	Kryptolebias_marmoratus
ENSOCUG00000002437	CPSF4	70	88.889	ENSLACG00000010938	CPSF4	100	88.889	Latimeria_chalumnae
ENSOCUG00000002437	CPSF4	70	60.741	ENSLACG00000018470	-	100	60.741	Latimeria_chalumnae
ENSOCUG00000002437	CPSF4	70	89.219	ENSLOCG00000004814	cpsf4	100	89.219	Lepisosteus_oculatus
ENSOCUG00000002437	CPSF4	70	98.885	ENSLAFG00000000159	CPSF4	100	98.885	Loxodonta_africana
ENSOCUG00000002437	CPSF4	70	98.885	ENSMFAG00000001462	CPSF4	100	98.885	Macaca_fascicularis
ENSOCUG00000002437	CPSF4	70	98.885	ENSMMUG00000019191	CPSF4	100	98.885	Macaca_mulatta
ENSOCUG00000002437	CPSF4	70	98.885	ENSMNEG00000032306	CPSF4	100	98.885	Macaca_nemestrina
ENSOCUG00000002437	CPSF4	70	98.885	ENSMLEG00000034721	CPSF4	100	98.885	Mandrillus_leucophaeus
ENSOCUG00000002437	CPSF4	70	84.074	ENSMAMG00000006244	cpsf4	100	84.074	Mastacembelus_armatus
ENSOCUG00000002437	CPSF4	70	83.333	ENSMZEG00005007515	cpsf4	100	83.333	Maylandia_zebra
ENSOCUG00000002437	CPSF4	61	83.830	ENSMGAG00000004235	CPSF4	100	82.553	Meleagris_gallopavo
ENSOCUG00000002437	CPSF4	70	99.257	ENSMAUG00000021253	Cpsf4	100	99.257	Mesocricetus_auratus
ENSOCUG00000002437	CPSF4	70	98.885	ENSMICG00000017429	CPSF4	100	98.885	Microcebus_murinus
ENSOCUG00000002437	CPSF4	70	99.257	ENSMOCG00000014901	Cpsf4	100	99.257	Microtus_ochrogaster
ENSOCUG00000002437	CPSF4	70	83.704	ENSMMOG00000001813	cpsf4	100	83.704	Mola_mola
ENSOCUG00000002437	CPSF4	70	96.654	ENSMODG00000001367	CPSF4	100	96.654	Monodelphis_domestica
ENSOCUG00000002437	CPSF4	70	82.222	ENSMALG00000012611	cpsf4	100	82.593	Monopterus_albus
ENSOCUG00000002437	CPSF4	70	99.257	MGP_CAROLIEiJ_G0028012	Cpsf4	100	99.257	Mus_caroli
ENSOCUG00000002437	CPSF4	70	99.257	ENSMUSG00000029625	Cpsf4	100	99.257	Mus_musculus
ENSOCUG00000002437	CPSF4	70	99.257	MGP_PahariEiJ_G0024581	Cpsf4	100	99.257	Mus_pahari
ENSOCUG00000002437	CPSF4	70	99.257	MGP_SPRETEiJ_G0029013	Cpsf4	100	99.257	Mus_spretus
ENSOCUG00000002437	CPSF4	70	99.257	ENSMPUG00000016508	CPSF4	100	99.257	Mustela_putorius_furo
ENSOCUG00000002437	CPSF4	61	88.085	ENSMLUG00000010980	CPSF4	100	88.085	Myotis_lucifugus
ENSOCUG00000002437	CPSF4	70	98.885	ENSNGAG00000001567	Cpsf4	100	98.885	Nannospalax_galili
ENSOCUG00000002437	CPSF4	65	81.275	ENSNBRG00000003943	cpsf4	98	82.927	Neolamprologus_brichardi
ENSOCUG00000002437	CPSF4	70	95.911	ENSNLEG00000011074	CPSF4	100	95.911	Nomascus_leucogenys
ENSOCUG00000002437	CPSF4	70	96.654	ENSMEUG00000006955	CPSF4	100	96.654	Notamacropus_eugenii
ENSOCUG00000002437	CPSF4	70	99.257	ENSOPRG00000013663	CPSF4	100	99.257	Ochotona_princeps
ENSOCUG00000002437	CPSF4	70	99.257	ENSODEG00000011181	-	100	99.257	Octodon_degus
ENSOCUG00000002437	CPSF4	69	76.226	ENSODEG00000018283	-	91	73.962	Octodon_degus
ENSOCUG00000002437	CPSF4	70	74.359	ENSODEG00000009779	-	100	74.359	Octodon_degus
ENSOCUG00000002437	CPSF4	70	83.333	ENSONIG00000008495	cpsf4	100	83.333	Oreochromis_niloticus
ENSOCUG00000002437	CPSF4	70	54.676	ENSOANG00000009568	-	100	54.317	Ornithorhynchus_anatinus
ENSOCUG00000002437	CPSF4	61	94.894	ENSOANG00000007729	CPSF4	100	94.894	Ornithorhynchus_anatinus
ENSOCUG00000002437	CPSF4	70	82.900	ENSORLG00000022798	cpsf4	100	82.900	Oryzias_latipes
ENSOCUG00000002437	CPSF4	70	82.900	ENSORLG00020008548	cpsf4	100	82.900	Oryzias_latipes_hni
ENSOCUG00000002437	CPSF4	70	82.528	ENSORLG00015019575	cpsf4	100	82.528	Oryzias_latipes_hsok
ENSOCUG00000002437	CPSF4	70	81.413	ENSOMEG00000005176	cpsf4	100	81.413	Oryzias_melastigma
ENSOCUG00000002437	CPSF4	70	99.257	ENSOGAG00000010884	CPSF4	100	99.257	Otolemur_garnettii
ENSOCUG00000002437	CPSF4	70	87.912	ENSOARG00000018668	CPSF4	100	87.179	Ovis_aries
ENSOCUG00000002437	CPSF4	70	98.513	ENSPPAG00000043355	CPSF4	100	98.513	Pan_paniscus
ENSOCUG00000002437	CPSF4	70	99.257	ENSPPRG00000003134	CPSF4	100	99.257	Panthera_pardus
ENSOCUG00000002437	CPSF4	63	99.174	ENSPTIG00000005604	CPSF4	90	99.174	Panthera_tigris_altaica
ENSOCUG00000002437	CPSF4	70	98.513	ENSPTRG00000019453	CPSF4	100	98.513	Pan_troglodytes
ENSOCUG00000002437	CPSF4	70	98.885	ENSPANG00000023123	CPSF4	100	98.885	Papio_anubis
ENSOCUG00000002437	CPSF4	70	83.577	ENSPKIG00000014278	cpsf4	100	83.577	Paramormyrops_kingsleyae
ENSOCUG00000002437	CPSF4	57	58.904	ENSPSIG00000018198	-	100	57.798	Pelodiscus_sinensis
ENSOCUG00000002437	CPSF4	56	95.370	ENSPSIG00000011229	CPSF4	100	95.370	Pelodiscus_sinensis
ENSOCUG00000002437	CPSF4	70	73.234	ENSPMGG00000017735	cpsf4	100	71.956	Periophthalmus_magnuspinnatus
ENSOCUG00000002437	CPSF4	70	99.257	ENSPEMG00000004508	Cpsf4	100	99.257	Peromyscus_maniculatus_bairdii
ENSOCUG00000002437	CPSF4	70	96.654	ENSPCIG00000024776	CPSF4	100	96.654	Phascolarctos_cinereus
ENSOCUG00000002437	CPSF4	70	82.222	ENSPFOG00000014912	cpsf4	100	82.222	Poecilia_formosa
ENSOCUG00000002437	CPSF4	70	75.093	ENSPLAG00000009599	cpsf4	100	75.093	Poecilia_latipinna
ENSOCUG00000002437	CPSF4	70	82.222	ENSPMEG00000009790	cpsf4	100	82.222	Poecilia_mexicana
ENSOCUG00000002437	CPSF4	70	81.481	ENSPREG00000018166	cpsf4	100	78.810	Poecilia_reticulata
ENSOCUG00000002437	CPSF4	61	97.863	ENSPPYG00000017378	CPSF4	100	97.863	Pongo_abelii
ENSOCUG00000002437	CPSF4	70	98.141	ENSPCAG00000001892	CPSF4	100	98.141	Procavia_capensis
ENSOCUG00000002437	CPSF4	70	98.885	ENSPCOG00000012771	CPSF4	100	98.885	Propithecus_coquereli
ENSOCUG00000002437	CPSF4	70	92.565	ENSPVAG00000007531	CPSF4	100	92.565	Pteropus_vampyrus
ENSOCUG00000002437	CPSF4	70	83.333	ENSPNYG00000018559	cpsf4	100	83.333	Pundamilia_nyererei
ENSOCUG00000002437	CPSF4	70	85.978	ENSPNAG00000003736	cpsf4	100	86.716	Pygocentrus_nattereri
ENSOCUG00000002437	CPSF4	70	89.591	ENSRNOG00000000985	Cpsf4	100	89.591	Rattus_norvegicus
ENSOCUG00000002437	CPSF4	61	98.718	ENSRBIG00000033886	CPSF4	100	98.718	Rhinopithecus_bieti
ENSOCUG00000002437	CPSF4	70	89.591	ENSRROG00000040431	CPSF4	100	89.591	Rhinopithecus_roxellana
ENSOCUG00000002437	CPSF4	70	98.885	ENSSBOG00000020493	CPSF4	100	98.885	Saimiri_boliviensis_boliviensis
ENSOCUG00000002437	CPSF4	70	96.654	ENSSHAG00000011533	CPSF4	100	96.654	Sarcophilus_harrisii
ENSOCUG00000002437	CPSF4	70	85.145	ENSSFOG00015007883	cpsf4	100	85.870	Scleropages_formosus
ENSOCUG00000002437	CPSF4	70	78.810	ENSSMAG00000006374	cpsf4	100	77.323	Scophthalmus_maximus
ENSOCUG00000002437	CPSF4	70	82.963	ENSSDUG00000018887	cpsf4	100	82.963	Seriola_dumerili
ENSOCUG00000002437	CPSF4	70	82.963	ENSSLDG00000019078	cpsf4	100	82.963	Seriola_lalandi_dorsalis
ENSOCUG00000002437	CPSF4	61	99.145	ENSSARG00000012416	CPSF4	100	99.145	Sorex_araneus
ENSOCUG00000002437	CPSF4	70	93.680	ENSSPUG00000003549	CPSF4	100	93.680	Sphenodon_punctatus
ENSOCUG00000002437	CPSF4	67	60.000	ENSSPUG00000014803	-	97	59.690	Sphenodon_punctatus
ENSOCUG00000002437	CPSF4	70	78.810	ENSSPAG00000006174	cpsf4	100	76.580	Stegastes_partitus
ENSOCUG00000002437	CPSF4	70	89.963	ENSSSCG00000026896	CPSF4	100	89.963	Sus_scrofa
ENSOCUG00000002437	CPSF4	70	84.502	ENSTGUG00000007552	CPSF4	100	83.026	Taeniopygia_guttata
ENSOCUG00000002437	CPSF4	70	80.952	ENSTRUG00000024220	cpsf4	100	80.952	Takifugu_rubripes
ENSOCUG00000002437	CPSF4	70	80.000	ENSTNIG00000006265	cpsf4	100	81.481	Tetraodon_nigroviridis
ENSOCUG00000002437	CPSF4	61	89.316	ENSTBEG00000011406	CPSF4	100	89.316	Tupaia_belangeri
ENSOCUG00000002437	CPSF4	70	78.439	ENSTTRG00000003007	CPSF4	100	78.439	Tursiops_truncatus
ENSOCUG00000002437	CPSF4	64	88.664	ENSUAMG00000008051	CPSF4	85	88.664	Ursus_americanus
ENSOCUG00000002437	CPSF4	70	89.591	ENSUMAG00000009474	CPSF4	100	89.591	Ursus_maritimus
ENSOCUG00000002437	CPSF4	70	89.591	ENSVVUG00000008824	CPSF4	100	89.591	Vulpes_vulpes
ENSOCUG00000002437	CPSF4	69	60.821	ENSXETG00000004641	cpsf4l	99	60.821	Xenopus_tropicalis
ENSOCUG00000002437	CPSF4	70	88.530	ENSXETG00000009892	cpsf4	100	88.530	Xenopus_tropicalis
ENSOCUG00000002437	CPSF4	70	81.852	ENSXCOG00000016040	cpsf4	100	81.852	Xiphophorus_couchianus
ENSOCUG00000002437	CPSF4	70	82.222	ENSXMAG00000024670	cpsf4	100	82.222	Xiphophorus_maculatus