EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000002441 (Gene tree)
Gene ID: 100346074
Gene Symbol: SBNO1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 78937 bases
Position: chrGL018923:50576-129512
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002120	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000002450	SBNO1-201	4329	-	ENSOCUP00000002120	1442 (aa)	-	G1SHL0

Gene Model

Click here to download ENSOCUG00000002441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000002441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000002441	SBNO1	95	96.277	ENSG00000139697	SBNO1	98	96.277	Homo_sapiens
ENSOCUG00000002441	SBNO1	78	80.210	ENSAPOG00000003196	sbno1	97	80.560	Acanthochromis_polyacanthus
ENSOCUG00000002441	SBNO1	95	96.215	ENSAMEG00000015151	SBNO1	98	96.215	Ailuropoda_melanoleuca
ENSOCUG00000002441	SBNO1	96	73.145	ENSACIG00000008088	sbno1	99	72.944	Amphilophus_citrinellus
ENSOCUG00000002441	SBNO1	95	74.660	ENSAOCG00000014859	sbno1	97	74.465	Amphiprion_ocellaris
ENSOCUG00000002441	SBNO1	95	74.660	ENSAPEG00000006069	sbno1	97	74.465	Amphiprion_percula
ENSOCUG00000002441	SBNO1	95	75.465	ENSATEG00000006667	sbno1	98	75.231	Anabas_testudineus
ENSOCUG00000002441	SBNO1	93	92.125	ENSAPLG00000015674	SBNO1	98	91.028	Anas_platyrhynchos
ENSOCUG00000002441	SBNO1	93	87.730	ENSACAG00000015441	SBNO1	87	86.715	Anolis_carolinensis
ENSOCUG00000002441	SBNO1	95	95.988	ENSANAG00000029958	-	98	96.144	Aotus_nancymaae
ENSOCUG00000002441	SBNO1	96	72.429	ENSACLG00000024913	sbno1	100	72.598	Astatotilapia_calliptera
ENSOCUG00000002441	SBNO1	93	80.132	ENSAMXG00000019473	sbno1	100	78.505	Astyanax_mexicanus
ENSOCUG00000002441	SBNO1	95	96.645	ENSBTAG00000020505	SBNO1	98	96.645	Bos_taurus
ENSOCUG00000002441	SBNO1	95	96.207	ENSCJAG00000016599	SBNO1	98	96.207	Callithrix_jacchus
ENSOCUG00000002441	SBNO1	95	96.358	ENSCAFG00000007503	SBNO1	98	97.699	Canis_familiaris
ENSOCUG00000002441	SBNO1	95	95.551	ENSCAFG00020015363	SBNO1	98	95.624	Canis_lupus_dingo
ENSOCUG00000002441	SBNO1	95	96.569	ENSCHIG00000008382	SBNO1	98	96.569	Capra_hircus
ENSOCUG00000002441	SBNO1	95	96.499	ENSTSYG00000012749	SBNO1	98	96.499	Carlito_syrichta
ENSOCUG00000002441	SBNO1	90	95.951	ENSCAPG00000000384	SBNO1	98	96.045	Cavia_aperea
ENSOCUG00000002441	SBNO1	95	95.547	ENSCPOG00000008109	SBNO1	98	96.045	Cavia_porcellus
ENSOCUG00000002441	SBNO1	95	91.691	ENSCCAG00000035316	SBNO1	98	91.691	Cebus_capucinus
ENSOCUG00000002441	SBNO1	94	94.294	ENSCATG00000008239	SBNO1	97	96.235	Cercocebus_atys
ENSOCUG00000002441	SBNO1	95	95.842	ENSCLAG00000008995	SBNO1	98	96.422	Chinchilla_lanigera
ENSOCUG00000002441	SBNO1	78	96.919	ENSCSAG00000002064	SBNO1	98	96.919	Chlorocebus_sabaeus
ENSOCUG00000002441	SBNO1	87	98.611	ENSCHOG00000008814	SBNO1	90	98.611	Choloepus_hoffmanni
ENSOCUG00000002441	SBNO1	93	92.056	ENSCPBG00000025968	SBNO1	98	90.008	Chrysemys_picta_bellii
ENSOCUG00000002441	SBNO1	95	90.962	ENSCANG00000042688	-	98	90.889	Colobus_angolensis_palliatus
ENSOCUG00000002441	SBNO1	95	95.478	ENSCGRG00001017470	Sbno1	98	95.478	Cricetulus_griseus_chok1gshd
ENSOCUG00000002441	SBNO1	95	95.478	ENSCGRG00000004756	Sbno1	98	95.478	Cricetulus_griseus_crigri
ENSOCUG00000002441	SBNO1	95	73.891	ENSCSEG00000011919	sbno1	98	74.603	Cynoglossus_semilaevis
ENSOCUG00000002441	SBNO1	95	74.696	ENSCVAG00000007038	sbno1	98	75.178	Cyprinodon_variegatus
ENSOCUG00000002441	SBNO1	93	79.161	ENSDARG00000099080	sbno1	99	77.817	Danio_rerio
ENSOCUG00000002441	SBNO1	95	96.184	ENSDNOG00000017147	SBNO1	98	96.814	Dasypus_novemcinctus
ENSOCUG00000002441	SBNO1	95	82.507	ENSDORG00000015261	Sbno1	98	82.507	Dipodomys_ordii
ENSOCUG00000002441	SBNO1	88	89.857	ENSETEG00000005620	SBNO1	91	89.857	Echinops_telfairi
ENSOCUG00000002441	SBNO1	72	62.616	ENSEBUG00000013823	sbno1	93	62.197	Eptatretus_burgeri
ENSOCUG00000002441	SBNO1	95	96.791	ENSECAG00000006127	SBNO1	98	96.791	Equus_caballus
ENSOCUG00000002441	SBNO1	78	91.789	ENSEEUG00000003793	SBNO1	81	91.789	Erinaceus_europaeus
ENSOCUG00000002441	SBNO1	94	77.028	ENSELUG00000002886	sbno1	100	76.073	Esox_lucius
ENSOCUG00000002441	SBNO1	95	96.791	ENSFCAG00000015331	SBNO1	98	96.791	Felis_catus
ENSOCUG00000002441	SBNO1	93	92.051	ENSFALG00000009273	SBNO1	98	91.028	Ficedula_albicollis
ENSOCUG00000002441	SBNO1	95	94.088	ENSFDAG00000014232	SBNO1	98	94.088	Fukomys_damarensis
ENSOCUG00000002441	SBNO1	95	74.713	ENSFHEG00000007360	sbno1	98	75.000	Fundulus_heteroclitus
ENSOCUG00000002441	SBNO1	89	77.202	ENSGMOG00000018229	sbno1	98	77.315	Gadus_morhua
ENSOCUG00000002441	SBNO1	85	92.445	ENSGALG00000003392	SBNO1	99	92.364	Gallus_gallus
ENSOCUG00000002441	SBNO1	95	74.982	ENSGAFG00000003960	sbno1	98	75.071	Gambusia_affinis
ENSOCUG00000002441	SBNO1	89	78.187	ENSGACG00000015633	sbno1	99	77.803	Gasterosteus_aculeatus
ENSOCUG00000002441	SBNO1	93	91.091	ENSGAGG00000001065	SBNO1	97	93.032	Gopherus_agassizii
ENSOCUG00000002441	SBNO1	95	96.204	ENSGGOG00000015000	SBNO1	98	96.234	Gorilla_gorilla
ENSOCUG00000002441	SBNO1	96	66.785	ENSHBUG00000011910	sbno1	100	66.974	Haplochromis_burtoni
ENSOCUG00000002441	SBNO1	95	95.624	ENSHGLG00000014165	-	98	95.624	Heterocephalus_glaber_female
ENSOCUG00000002441	SBNO1	88	84.783	ENSHCOG00000003246	sbno1	95	84.783	Hippocampus_comes
ENSOCUG00000002441	SBNO1	94	78.349	ENSIPUG00000015830	Sbno1	98	78.420	Ictalurus_punctatus
ENSOCUG00000002441	SBNO1	95	96.569	ENSSTOG00000023221	SBNO1	98	96.569	Ictidomys_tridecemlineatus
ENSOCUG00000002441	SBNO1	95	95.624	ENSJJAG00000001741	Sbno1	98	95.624	Jaculus_jaculus
ENSOCUG00000002441	SBNO1	95	74.642	ENSKMAG00000009696	sbno1	98	74.982	Kryptolebias_marmoratus
ENSOCUG00000002441	SBNO1	95	75.321	ENSLBEG00000007623	sbno1	98	75.284	Labrus_bergylta
ENSOCUG00000002441	SBNO1	94	80.408	ENSLACG00000017227	SBNO1	99	83.793	Latimeria_chalumnae
ENSOCUG00000002441	SBNO1	93	81.791	ENSLOCG00000005725	sbno1	96	80.750	Lepisosteus_oculatus
ENSOCUG00000002441	SBNO1	95	95.259	ENSLAFG00000002135	SBNO1	98	95.259	Loxodonta_africana
ENSOCUG00000002441	SBNO1	95	96.061	ENSMFAG00000031429	SBNO1	99	96.793	Macaca_fascicularis
ENSOCUG00000002441	SBNO1	95	96.131	ENSMMUG00000011496	SBNO1	98	96.131	Macaca_mulatta
ENSOCUG00000002441	SBNO1	95	94.311	ENSMLEG00000033260	SBNO1	98	96.234	Mandrillus_leucophaeus
ENSOCUG00000002441	SBNO1	95	74.857	ENSMAMG00000005473	sbno1	98	75.000	Mastacembelus_armatus
ENSOCUG00000002441	SBNO1	93	92.199	ENSMGAG00000003274	SBNO1	99	92.283	Meleagris_gallopavo
ENSOCUG00000002441	SBNO1	95	95.186	ENSMICG00000006573	-	98	95.186	Microcebus_murinus
ENSOCUG00000002441	SBNO1	95	92.055	ENSMOCG00000009390	Sbno1	98	95.480	Microtus_ochrogaster
ENSOCUG00000002441	SBNO1	95	71.655	ENSMMOG00000008691	sbno1	97	71.214	Mola_mola
ENSOCUG00000002441	SBNO1	95	93.508	ENSMODG00000012470	SBNO1	97	93.435	Monodelphis_domestica
ENSOCUG00000002441	SBNO1	95	74.982	ENSMALG00000001056	sbno1	98	74.538	Monopterus_albus
ENSOCUG00000002441	SBNO1	95	95.547	MGP_CAROLIEiJ_G0027749	Sbno1	95	100.000	Mus_caroli
ENSOCUG00000002441	SBNO1	95	95.912	ENSMUSG00000038095	Sbno1	100	96.061	Mus_musculus
ENSOCUG00000002441	SBNO1	95	95.912	MGP_PahariEiJ_G0024329	Sbno1	100	96.315	Mus_pahari
ENSOCUG00000002441	SBNO1	95	95.766	MGP_SPRETEiJ_G0028747	Sbno1	95	100.000	Mus_spretus
ENSOCUG00000002441	SBNO1	95	96.572	ENSMPUG00000001658	SBNO1	98	96.572	Mustela_putorius_furo
ENSOCUG00000002441	SBNO1	95	96.134	ENSMLUG00000017159	SBNO1	98	96.134	Myotis_lucifugus
ENSOCUG00000002441	SBNO1	95	96.061	ENSNGAG00000012620	Sbno1	98	98.826	Nannospalax_galili
ENSOCUG00000002441	SBNO1	96	72.448	ENSNBRG00000019189	sbno1	100	72.617	Neolamprologus_brichardi
ENSOCUG00000002441	SBNO1	95	93.741	ENSNLEG00000001502	SBNO1	99	93.741	Nomascus_leucogenys
ENSOCUG00000002441	SBNO1	60	86.076	ENSMEUG00000008768	-	93	89.873	Notamacropus_eugenii
ENSOCUG00000002441	SBNO1	95	94.096	ENSOPRG00000011054	SBNO1	98	94.023	Ochotona_princeps
ENSOCUG00000002441	SBNO1	95	95.766	ENSODEG00000009997	SBNO1	98	96.234	Octodon_degus
ENSOCUG00000002441	SBNO1	96	73.488	ENSONIG00000015348	sbno1	100	73.791	Oreochromis_niloticus
ENSOCUG00000002441	SBNO1	95	74.143	ENSORLG00000001593	sbno1	99	75.399	Oryzias_latipes
ENSOCUG00000002441	SBNO1	95	74.267	ENSORLG00020015216	sbno1	98	74.536	Oryzias_latipes_hni
ENSOCUG00000002441	SBNO1	95	74.267	ENSORLG00015002726	sbno1	98	74.608	Oryzias_latipes_hsok
ENSOCUG00000002441	SBNO1	95	74.518	ENSOMEG00000019313	sbno1	98	74.947	Oryzias_melastigma
ENSOCUG00000002441	SBNO1	95	96.356	ENSOARG00000004404	SBNO1	98	96.356	Ovis_aries
ENSOCUG00000002441	SBNO1	95	96.280	ENSPPAG00000024635	SBNO1	98	96.280	Pan_paniscus
ENSOCUG00000002441	SBNO1	95	96.791	ENSPPRG00000022092	SBNO1	98	96.791	Panthera_pardus
ENSOCUG00000002441	SBNO1	95	96.645	ENSPTIG00000017803	SBNO1	98	96.645	Panthera_tigris_altaica
ENSOCUG00000002441	SBNO1	95	96.280	ENSPTRG00000005597	SBNO1	98	96.280	Pan_troglodytes
ENSOCUG00000002441	SBNO1	95	96.204	ENSPANG00000011640	SBNO1	98	97.192	Papio_anubis
ENSOCUG00000002441	SBNO1	95	79.840	ENSPKIG00000001441	sbno1	98	79.753	Paramormyrops_kingsleyae
ENSOCUG00000002441	SBNO1	93	91.050	ENSPSIG00000009572	-	98	89.971	Pelodiscus_sinensis
ENSOCUG00000002441	SBNO1	89	87.481	ENSPSIG00000009256	-	100	87.481	Pelodiscus_sinensis
ENSOCUG00000002441	SBNO1	95	95.259	ENSPEMG00000016087	Sbno1	98	95.259	Peromyscus_maniculatus_bairdii
ENSOCUG00000002441	SBNO1	95	92.857	ENSPCIG00000010985	SBNO1	98	93.003	Phascolarctos_cinereus
ENSOCUG00000002441	SBNO1	95	75.287	ENSPFOG00000005069	sbno1	98	75.374	Poecilia_formosa
ENSOCUG00000002441	SBNO1	95	75.143	ENSPLAG00000015015	sbno1	98	75.481	Poecilia_latipinna
ENSOCUG00000002441	SBNO1	95	75.304	ENSPMEG00000021212	sbno1	98	75.391	Poecilia_mexicana
ENSOCUG00000002441	SBNO1	95	74.946	ENSPREG00000017746	sbno1	98	75.036	Poecilia_reticulata
ENSOCUG00000002441	SBNO1	95	95.912	ENSPPYG00000005084	SBNO1	98	95.912	Pongo_abelii
ENSOCUG00000002441	SBNO1	84	91.770	ENSPCAG00000008634	SBNO1	87	91.989	Procavia_capensis
ENSOCUG00000002441	SBNO1	95	96.499	ENSPCOG00000024277	SBNO1	98	96.499	Propithecus_coquereli
ENSOCUG00000002441	SBNO1	82	95.851	ENSPVAG00000015304	SBNO1	85	95.851	Pteropus_vampyrus
ENSOCUG00000002441	SBNO1	96	73.803	ENSPNYG00000004291	sbno1	100	73.895	Pundamilia_nyererei
ENSOCUG00000002441	SBNO1	94	78.799	ENSPNAG00000015622	sbno1	100	77.589	Pygocentrus_nattereri
ENSOCUG00000002441	SBNO1	95	95.478	ENSRNOG00000001064	Sbno1	98	96.045	Rattus_norvegicus
ENSOCUG00000002441	SBNO1	95	96.207	ENSRROG00000034230	SBNO1	98	96.234	Rhinopithecus_roxellana
ENSOCUG00000002441	SBNO1	91	90.923	ENSSBOG00000015422	SBNO1	98	90.923	Saimiri_boliviensis_boliviensis
ENSOCUG00000002441	SBNO1	95	78.680	ENSSFOG00015019025	sbno1	98	79.623	Scleropages_formosus
ENSOCUG00000002441	SBNO1	95	75.000	ENSSMAG00000013640	sbno1	98	75.215	Scophthalmus_maximus
ENSOCUG00000002441	SBNO1	95	75.107	ENSSDUG00000023480	sbno1	98	74.858	Seriola_dumerili
ENSOCUG00000002441	SBNO1	95	75.179	ENSSLDG00000007928	sbno1	98	74.929	Seriola_lalandi_dorsalis
ENSOCUG00000002441	SBNO1	84	96.635	ENSSARG00000002594	SBNO1	88	96.635	Sorex_araneus
ENSOCUG00000002441	SBNO1	93	89.013	ENSSPUG00000012640	SBNO1	98	87.965	Sphenodon_punctatus
ENSOCUG00000002441	SBNO1	95	73.916	ENSSPAG00000016244	sbno1	98	74.200	Stegastes_partitus
ENSOCUG00000002441	SBNO1	95	96.496	ENSSSCG00000009776	SBNO1	98	96.496	Sus_scrofa
ENSOCUG00000002441	SBNO1	93	91.976	ENSTGUG00000005380	SBNO1	98	90.956	Taeniopygia_guttata
ENSOCUG00000002441	SBNO1	95	74.643	ENSTRUG00000018490	sbno1	98	74.609	Takifugu_rubripes
ENSOCUG00000002441	SBNO1	54	70.284	ENSTNIG00000013506	sbno1	99	70.260	Tetraodon_nigroviridis
ENSOCUG00000002441	SBNO1	95	96.499	ENSUAMG00000019671	SBNO1	98	96.499	Ursus_americanus
ENSOCUG00000002441	SBNO1	95	96.499	ENSUMAG00000004002	SBNO1	98	96.499	Ursus_maritimus
ENSOCUG00000002441	SBNO1	89	92.578	ENSVPAG00000007024	SBNO1	92	92.578	Vicugna_pacos
ENSOCUG00000002441	SBNO1	95	96.499	ENSVVUG00000027807	SBNO1	98	96.499	Vulpes_vulpes
ENSOCUG00000002441	SBNO1	94	81.627	ENSXETG00000031930	SBNO1	98	81.858	Xenopus_tropicalis
ENSOCUG00000002441	SBNO1	85	74.281	ENSXCOG00000011607	sbno1	95	75.100	Xiphophorus_couchianus
ENSOCUG00000002441	SBNO1	95	75.233	ENSXMAG00000002140	sbno1	98	75.391	Xiphophorus_maculatus