EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000002879 (Gene tree)
Gene ID: 100346393
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 45443 bases
Position: chr18:17804395-17849837
Accession: 100346393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002502	GUCT	PF08152.12	1.2e-27	1	1
ENSOCUP00000018368	GUCT	PF08152.12	1.3e-27	1	1
ENSOCUP00000002502	ResIII	PF04851.15	1.4e-10	1	1
ENSOCUP00000018368	ResIII	PF04851.15	1.5e-10	1	1
ENSOCUP00000002502	DEAD	PF00270.29	3.3e-48	1	1
ENSOCUP00000018368	DEAD	PF00270.29	3.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000029944	DDX50-202	2205	XM_002718449	ENSOCUP00000018368	735 (aa)	XP_002718495	G1TN01
ENSOCUT00000002879	DDX50-201	2139	-	ENSOCUP00000002502	712 (aa)	-	G1SIJ1

Gene Model

Click here to download ENSOCUG00000002879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000002879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000002879	DDX50	50	31.198	ENSOCUG00000025811	-	58	31.198
ENSOCUG00000002879	DDX50	51	33.693	ENSOCUG00000004982	DDX17	55	33.693
ENSOCUG00000002879	DDX50	50	33.151	ENSOCUG00000023209	DDX41	64	33.151
ENSOCUG00000002879	DDX50	50	34.358	ENSOCUG00000006338	-	54	34.358
ENSOCUG00000002879	DDX50	57	32.775	ENSOCUG00000016108	DDX27	50	32.775
ENSOCUG00000002879	DDX50	52	32.708	ENSOCUG00000010375	EIF4A1	88	32.258
ENSOCUG00000002879	DDX50	52	31.903	ENSOCUG00000005011	EIF4A2	87	31.452
ENSOCUG00000002879	DDX50	50	32.713	ENSOCUG00000012338	DDX3X	56	32.713
ENSOCUG00000002879	DDX50	82	66.338	ENSOCUG00000002888	DDX21	66	68.280
ENSOCUG00000002879	DDX50	55	34.709	ENSOCUG00000012586	-	68	32.520
ENSOCUG00000002879	DDX50	54	31.969	ENSOCUG00000014390	DDX47	85	31.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000002879	DDX50	100	95.664	ENSG00000107625	DDX50	100	95.664	Homo_sapiens
ENSOCUG00000002879	DDX50	95	95.154	ENSAMEG00000017992	DDX50	95	93.696	Ailuropoda_melanoleuca
ENSOCUG00000002879	DDX50	95	76.845	ENSANAG00000017785	-	94	75.915	Aotus_nancymaae
ENSOCUG00000002879	DDX50	95	95.147	ENSBTAG00000033413	DDX50	95	93.687	Bos_taurus
ENSOCUG00000002879	DDX50	100	95.664	ENSCJAG00000018844	DDX50	100	95.664	Callithrix_jacchus
ENSOCUG00000002879	DDX50	96	95.328	ENSCAFG00000013776	DDX50	99	95.582	Canis_familiaris
ENSOCUG00000002879	DDX50	95	95.595	ENSCAFG00020025977	DDX50	94	94.126	Canis_lupus_dingo
ENSOCUG00000002879	DDX50	100	93.360	ENSCHIG00000000285	DDX50	94	93.687	Capra_hircus
ENSOCUG00000002879	DDX50	95	95.575	ENSTSYG00000004192	DDX50	100	91.588	Carlito_syrichta
ENSOCUG00000002879	DDX50	90	77.984	ENSCAPG00000007230	-	89	76.818	Cavia_aperea
ENSOCUG00000002879	DDX50	94	95.097	ENSCPOG00000002131	-	95	93.678	Cavia_porcellus
ENSOCUG00000002879	DDX50	84	92.473	ENSCCAG00000030543	DDX50	93	85.658	Cebus_capucinus
ENSOCUG00000002879	DDX50	94	65.886	ENSCATG00000039259	-	87	70.909	Cercocebus_atys
ENSOCUG00000002879	DDX50	99	70.588	ENSCATG00000035153	-	93	87.349	Cercocebus_atys
ENSOCUG00000002879	DDX50	99	93.487	ENSCATG00000032463	DDX50	99	93.487	Cercocebus_atys
ENSOCUG00000002879	DDX50	97	68.917	ENSCLAG00000001938	-	92	69.803	Chinchilla_lanigera
ENSOCUG00000002879	DDX50	95	95.569	ENSCLAG00000012957	-	95	94.109	Chinchilla_lanigera
ENSOCUG00000002879	DDX50	50	85.405	ENSCLAG00000001553	-	80	87.821	Chinchilla_lanigera
ENSOCUG00000002879	DDX50	100	95.664	ENSCSAG00000007703	DDX50	100	95.664	Chlorocebus_sabaeus
ENSOCUG00000002879	DDX50	91	93.991	ENSCHOG00000000233	DDX50	98	92.977	Choloepus_hoffmanni
ENSOCUG00000002879	DDX50	86	68.413	ENSCANG00000018820	-	92	70.470	Colobus_angolensis_palliatus
ENSOCUG00000002879	DDX50	99	66.527	ENSCANG00000028077	-	94	66.097	Colobus_angolensis_palliatus
ENSOCUG00000002879	DDX50	95	81.268	ENSCANG00000036450	-	94	80.201	Colobus_angolensis_palliatus
ENSOCUG00000002879	DDX50	95	94.535	ENSCGRG00001020223	Ddx50	95	92.960	Cricetulus_griseus_chok1gshd
ENSOCUG00000002879	DDX50	95	94.659	ENSCGRG00000015884	Ddx50	95	93.094	Cricetulus_griseus_crigri
ENSOCUG00000002879	DDX50	90	88.872	ENSDNOG00000001675	DDX50	100	88.872	Dasypus_novemcinctus
ENSOCUG00000002879	DDX50	95	94.838	ENSDORG00000007310	Ddx50	100	90.909	Dipodomys_ordii
ENSOCUG00000002879	DDX50	85	97.964	ENSETEG00000014069	DDX50	90	91.759	Echinops_telfairi
ENSOCUG00000002879	DDX50	95	95.588	ENSEASG00005015595	DDX50	94	94.118	Equus_asinus_asinus
ENSOCUG00000002879	DDX50	95	95.735	ENSECAG00000023044	DDX50	94	94.261	Equus_caballus
ENSOCUG00000002879	DDX50	86	93.069	ENSEEUG00000005782	DDX50	85	93.000	Erinaceus_europaeus
ENSOCUG00000002879	DDX50	95	95.876	ENSFCAG00000012678	DDX50	94	94.413	Felis_catus
ENSOCUG00000002879	DDX50	95	88.348	ENSFDAG00000016109	-	94	87.088	Fukomys_damarensis
ENSOCUG00000002879	DDX50	51	81.217	ENSGGOG00000041063	-	86	82.090	Gorilla_gorilla
ENSOCUG00000002879	DDX50	100	95.664	ENSGGOG00000010100	DDX50	100	95.664	Gorilla_gorilla
ENSOCUG00000002879	DDX50	51	74.238	ENSGGOG00000022568	-	91	77.676	Gorilla_gorilla
ENSOCUG00000002879	DDX50	95	93.510	ENSHGLG00000013466	DDX50	95	92.109	Heterocephalus_glaber_female
ENSOCUG00000002879	DDX50	95	93.510	ENSHGLG00100017191	DDX50	95	92.109	Heterocephalus_glaber_male
ENSOCUG00000002879	DDX50	85	86.702	ENSHGLG00100006568	-	98	80.973	Heterocephalus_glaber_male
ENSOCUG00000002879	DDX50	100	92.016	ENSSTOG00000021852	-	95	92.264	Ictidomys_tridecemlineatus
ENSOCUG00000002879	DDX50	100	91.599	ENSJJAG00000023928	-	95	91.679	Jaculus_jaculus
ENSOCUG00000002879	DDX50	100	70.850	ENSJJAG00000019626	-	100	70.083	Jaculus_jaculus
ENSOCUG00000002879	DDX50	95	95.575	ENSLAFG00000006186	DDX50	95	94.524	Loxodonta_africana
ENSOCUG00000002879	DDX50	99	70.868	ENSMFAG00000045339	-	93	86.747	Macaca_fascicularis
ENSOCUG00000002879	DDX50	100	95.664	ENSMFAG00000044067	DDX50	100	95.664	Macaca_fascicularis
ENSOCUG00000002879	DDX50	82	67.458	ENSMMUG00000045343	-	94	60.602	Macaca_mulatta
ENSOCUG00000002879	DDX50	100	95.664	ENSMMUG00000001006	DDX50	100	96.731	Macaca_mulatta
ENSOCUG00000002879	DDX50	98	71.989	ENSMNEG00000045530	-	90	89.408	Macaca_nemestrina
ENSOCUG00000002879	DDX50	95	89.086	ENSMNEG00000031664	DDX50	94	87.805	Macaca_nemestrina
ENSOCUG00000002879	DDX50	95	94.395	ENSMLEG00000037313	DDX50	95	92.970	Mandrillus_leucophaeus
ENSOCUG00000002879	DDX50	86	84.211	ENSMLEG00000041988	-	93	85.049	Mandrillus_leucophaeus
ENSOCUG00000002879	DDX50	58	92.494	ENSMAUG00000022192	Ddx50	100	92.494	Mesocricetus_auratus
ENSOCUG00000002879	DDX50	95	87.316	ENSMICG00000017539	DDX50	100	84.803	Microcebus_murinus
ENSOCUG00000002879	DDX50	95	94.118	ENSMOCG00000001676	Ddx50	95	92.561	Microtus_ochrogaster
ENSOCUG00000002879	DDX50	95	79.678	ENSMODG00000010741	DDX50	99	77.181	Monodelphis_domestica
ENSOCUG00000002879	DDX50	95	93.796	MGP_CAROLIEiJ_G0015389	Ddx50	100	90.489	Mus_caroli
ENSOCUG00000002879	DDX50	95	94.387	ENSMUSG00000020076	Ddx50	100	91.033	Mus_musculus
ENSOCUG00000002879	DDX50	95	94.535	MGP_PahariEiJ_G0030805	Ddx50	100	91.168	Mus_pahari
ENSOCUG00000002879	DDX50	95	94.387	MGP_SPRETEiJ_G0016200	Ddx50	100	91.033	Mus_spretus
ENSOCUG00000002879	DDX50	91	95.209	ENSMPUG00000004589	DDX50	99	95.209	Mustela_putorius_furo
ENSOCUG00000002879	DDX50	95	93.510	ENSMLUG00000017590	DDX50	95	90.818	Myotis_lucifugus
ENSOCUG00000002879	DDX50	95	94.690	ENSNGAG00000004283	Ddx50	95	93.257	Nannospalax_galili
ENSOCUG00000002879	DDX50	100	95.664	ENSNLEG00000011631	DDX50	100	95.664	Nomascus_leucogenys
ENSOCUG00000002879	DDX50	88	67.435	ENSNLEG00000035506	-	89	77.090	Nomascus_leucogenys
ENSOCUG00000002879	DDX50	95	94.675	ENSOPRG00000001619	DDX50	95	93.237	Ochotona_princeps
ENSOCUG00000002879	DDX50	95	94.535	ENSODEG00000014597	-	100	90.489	Octodon_degus
ENSOCUG00000002879	DDX50	98	61.598	ENSOANG00000004776	DDX50	82	68.140	Ornithorhynchus_anatinus
ENSOCUG00000002879	DDX50	95	95.575	ENSOGAG00000001844	DDX50	95	94.118	Otolemur_garnettii
ENSOCUG00000002879	DDX50	100	93.360	ENSOARG00000005264	DDX50	94	93.687	Ovis_aries
ENSOCUG00000002879	DDX50	100	95.528	ENSPPAG00000040723	DDX50	100	95.528	Pan_paniscus
ENSOCUG00000002879	DDX50	50	74.230	ENSPPAG00000026788	-	90	77.709	Pan_paniscus
ENSOCUG00000002879	DDX50	95	95.876	ENSPPRG00000015826	DDX50	95	94.413	Panthera_pardus
ENSOCUG00000002879	DDX50	95	95.876	ENSPTIG00000008454	DDX50	95	94.413	Panthera_tigris_altaica
ENSOCUG00000002879	DDX50	100	95.528	ENSPTRG00000002562	DDX50	100	95.528	Pan_troglodytes
ENSOCUG00000002879	DDX50	50	74.230	ENSPTRG00000044913	-	90	78.019	Pan_troglodytes
ENSOCUG00000002879	DDX50	95	88.496	ENSPANG00000022143	-	94	87.231	Papio_anubis
ENSOCUG00000002879	DDX50	95	93.058	ENSPEMG00000020899	-	95	91.130	Peromyscus_maniculatus_bairdii
ENSOCUG00000002879	DDX50	95	79.204	ENSPCIG00000016036	DDX50	96	79.191	Phascolarctos_cinereus
ENSOCUG00000002879	DDX50	91	96.731	ENSPPYG00000002390	DDX50	100	96.731	Pongo_abelii
ENSOCUG00000002879	DDX50	86	81.169	ENSPCAG00000009692	DDX50	100	81.169	Procavia_capensis
ENSOCUG00000002879	DDX50	79	84.848	ENSPCOG00000012574	DDX50	91	84.848	Propithecus_coquereli
ENSOCUG00000002879	DDX50	86	91.736	ENSPVAG00000009519	DDX50	80	92.562	Pteropus_vampyrus
ENSOCUG00000002879	DDX50	95	93.796	ENSRNOG00000000396	Ddx50	98	91.711	Rattus_norvegicus
ENSOCUG00000002879	DDX50	99	65.253	ENSRBIG00000036573	-	95	65.751	Rhinopithecus_bieti
ENSOCUG00000002879	DDX50	90	93.779	ENSRBIG00000042841	-	98	96.735	Rhinopithecus_bieti
ENSOCUG00000002879	DDX50	99	64.534	ENSRBIG00000039673	-	93	64.429	Rhinopithecus_bieti
ENSOCUG00000002879	DDX50	99	62.892	ENSRROG00000022853	-	95	63.022	Rhinopithecus_roxellana
ENSOCUG00000002879	DDX50	51	73.056	ENSRROG00000031940	-	92	72.384	Rhinopithecus_roxellana
ENSOCUG00000002879	DDX50	100	95.393	ENSRROG00000032158	DDX50	100	96.588	Rhinopithecus_roxellana
ENSOCUG00000002879	DDX50	95	84.661	ENSSBOG00000014441	DDX50	99	85.873	Saimiri_boliviensis_boliviensis
ENSOCUG00000002879	DDX50	91	80.245	ENSSHAG00000005690	DDX50	97	78.205	Sarcophilus_harrisii
ENSOCUG00000002879	DDX50	78	70.631	ENSSHAG00000005334	-	81	66.561	Sarcophilus_harrisii
ENSOCUG00000002879	DDX50	90	85.736	ENSSARG00000013553	DDX50	88	85.736	Sorex_araneus
ENSOCUG00000002879	DDX50	100	92.818	ENSSSCG00000010246	DDX50	94	93.257	Sus_scrofa
ENSOCUG00000002879	DDX50	95	73.117	ENSTBEG00000001085	DDX50	94	72.270	Tupaia_belangeri
ENSOCUG00000002879	DDX50	95	88.496	ENSTTRG00000012408	DDX50	94	87.231	Tursiops_truncatus
ENSOCUG00000002879	DDX50	95	95.595	ENSUAMG00000010976	DDX50	99	93.857	Ursus_americanus
ENSOCUG00000002879	DDX50	95	95.595	ENSUMAG00000007726	DDX50	94	94.126	Ursus_maritimus
ENSOCUG00000002879	DDX50	95	94.985	ENSVPAG00000000626	DDX50	95	93.544	Vicugna_pacos
ENSOCUG00000002879	DDX50	82	92.833	ENSVVUG00000020366	DDX50	97	92.833	Vulpes_vulpes