EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000002954 (Gene tree)
Gene ID: 100358381
Gene Symbol: CASC3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 22856 bases
Position: chr19:41333710-41356565
Accession: 100358381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000018628	Btz	PF09405.10	1.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026613	CASC3-201	4403	XM_002719352	ENSOCUP00000018628	701 (aa)	XP_002719398	G1TNQ2

Gene Model

Click here to download ENSOCUG00000002954's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000002954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000002954	CASC3	100	93.457	ENSG00000108349	CASC3	100	93.741	Homo_sapiens
ENSOCUG00000002954	CASC3	74	51.793	ENSAPOG00000008467	casc3	79	50.467	Acanthochromis_polyacanthus
ENSOCUG00000002954	CASC3	100	94.595	ENSAMEG00000007764	CASC3	100	95.164	Ailuropoda_melanoleuca
ENSOCUG00000002954	CASC3	75	52.903	ENSAOCG00000016676	casc3	61	60.452	Amphiprion_ocellaris
ENSOCUG00000002954	CASC3	84	52.903	ENSAPEG00000006787	casc3	78	50.955	Amphiprion_percula
ENSOCUG00000002954	CASC3	74	54.321	ENSATEG00000017196	casc3	68	52.941	Anabas_testudineus
ENSOCUG00000002954	CASC3	91	70.814	ENSACAG00000002674	CASC3	99	66.758	Anolis_carolinensis
ENSOCUG00000002954	CASC3	66	97.170	ENSANAG00000031954	-	100	97.170	Aotus_nancymaae
ENSOCUG00000002954	CASC3	99	82.395	ENSANAG00000034820	-	99	88.791	Aotus_nancymaae
ENSOCUG00000002954	CASC3	90	47.017	ENSAMXG00000032452	casc3	90	45.743	Astyanax_mexicanus
ENSOCUG00000002954	CASC3	100	93.741	ENSBTAG00000006250	CASC3	100	93.457	Bos_taurus
ENSOCUG00000002954	CASC3	100	92.034	ENSCJAG00000016032	CASC3	100	92.603	Callithrix_jacchus
ENSOCUG00000002954	CASC3	100	94.879	ENSCAFG00000016141	CASC3	100	95.448	Canis_familiaris
ENSOCUG00000002954	CASC3	100	93.892	ENSCAFG00020018882	CASC3	100	95.050	Canis_lupus_dingo
ENSOCUG00000002954	CASC3	100	92.603	ENSCHIG00000006338	CASC3	100	92.603	Capra_hircus
ENSOCUG00000002954	CASC3	100	87.909	ENSTSYG00000002975	CASC3	89	95.024	Carlito_syrichta
ENSOCUG00000002954	CASC3	88	88.799	ENSCAPG00000010514	CASC3	100	89.448	Cavia_aperea
ENSOCUG00000002954	CASC3	100	88.051	ENSCPOG00000015139	CASC3	100	88.193	Cavia_porcellus
ENSOCUG00000002954	CASC3	100	92.330	ENSCCAG00000033620	CASC3	100	92.756	Cebus_capucinus
ENSOCUG00000002954	CASC3	100	94.318	ENSCATG00000033593	CASC3	100	94.602	Cercocebus_atys
ENSOCUG00000002954	CASC3	100	88.905	ENSCLAG00000013730	CASC3	100	89.047	Chinchilla_lanigera
ENSOCUG00000002954	CASC3	100	94.318	ENSCSAG00000002777	CASC3	100	94.602	Chlorocebus_sabaeus
ENSOCUG00000002954	CASC3	99	72.803	ENSCPBG00000004750	CASC3	99	73.669	Chrysemys_picta_bellii
ENSOCUG00000002954	CASC3	100	94.176	ENSCANG00000008814	CASC3	100	94.460	Colobus_angolensis_palliatus
ENSOCUG00000002954	CASC3	100	92.461	ENSCGRG00001014706	Casc3	100	92.603	Cricetulus_griseus_chok1gshd
ENSOCUG00000002954	CASC3	100	85.349	ENSCGRG00000001952	Casc3	96	92.937	Cricetulus_griseus_crigri
ENSOCUG00000002954	CASC3	82	49.398	ENSCSEG00000010047	casc3	57	64.375	Cynoglossus_semilaevis
ENSOCUG00000002954	CASC3	100	93.599	ENSDNOG00000017249	CASC3	96	93.883	Dasypus_novemcinctus
ENSOCUG00000002954	CASC3	100	86.060	ENSETEG00000013720	CASC3	100	86.060	Echinops_telfairi
ENSOCUG00000002954	CASC3	99	37.252	ENSEBUG00000010654	casc3	98	36.352	Eptatretus_burgeri
ENSOCUG00000002954	CASC3	100	93.333	ENSEASG00005002909	CASC3	100	93.791	Equus_asinus_asinus
ENSOCUG00000002954	CASC3	100	94.595	ENSECAG00000019947	CASC3	88	94.879	Equus_caballus
ENSOCUG00000002954	CASC3	73	88.867	ENSEEUG00000014253	CASC3	100	89.648	Erinaceus_europaeus
ENSOCUG00000002954	CASC3	100	94.452	ENSFCAG00000014998	CASC3	100	95.021	Felis_catus
ENSOCUG00000002954	CASC3	88	73.083	ENSFALG00000000412	CASC3	98	73.585	Ficedula_albicollis
ENSOCUG00000002954	CASC3	93	86.301	ENSFDAG00000020696	CASC3	100	86.606	Fukomys_damarensis
ENSOCUG00000002954	CASC3	76	55.556	ENSFHEG00000015793	casc3	79	51.829	Fundulus_heteroclitus
ENSOCUG00000002954	CASC3	90	75.786	ENSGALG00000031813	CASC3	99	70.881	Gallus_gallus
ENSOCUG00000002954	CASC3	89	75.358	ENSGAGG00000008432	CASC3	94	77.368	Gopherus_agassizii
ENSOCUG00000002954	CASC3	100	93.314	ENSGGOG00000005067	CASC3	100	93.883	Gorilla_gorilla
ENSOCUG00000002954	CASC3	100	89.331	ENSHGLG00000012117	CASC3	100	89.616	Heterocephalus_glaber_female
ENSOCUG00000002954	CASC3	89	89.137	ENSHGLG00100002268	CASC3	99	89.727	Heterocephalus_glaber_male
ENSOCUG00000002954	CASC3	98	47.082	ENSIPUG00000002679	casc3	99	46.895	Ictalurus_punctatus
ENSOCUG00000002954	CASC3	100	93.030	ENSSTOG00000006374	CASC3	100	93.599	Ictidomys_tridecemlineatus
ENSOCUG00000002954	CASC3	100	90.625	ENSJJAG00000023525	Casc3	100	91.051	Jaculus_jaculus
ENSOCUG00000002954	CASC3	64	62.605	ENSKMAG00000019507	casc3	81	48.785	Kryptolebias_marmoratus
ENSOCUG00000002954	CASC3	76	50.153	ENSLBEG00000005435	casc3	59	60.674	Labrus_bergylta
ENSOCUG00000002954	CASC3	90	60.061	ENSLACG00000013200	CASC3	99	57.123	Latimeria_chalumnae
ENSOCUG00000002954	CASC3	73	73.430	ENSLOCG00000013518	casc3	71	72.464	Lepisosteus_oculatus
ENSOCUG00000002954	CASC3	100	92.461	ENSLAFG00000000606	CASC3	100	92.745	Loxodonta_africana
ENSOCUG00000002954	CASC3	100	94.318	ENSMFAG00000041496	CASC3	100	95.033	Macaca_fascicularis
ENSOCUG00000002954	CASC3	100	94.318	ENSMMUG00000045187	CASC3	100	94.602	Macaca_mulatta
ENSOCUG00000002954	CASC3	89	94.258	ENSMLEG00000029049	CASC3	98	94.872	Mandrillus_leucophaeus
ENSOCUG00000002954	CASC3	76	53.150	ENSMAMG00000005235	casc3	91	43.520	Mastacembelus_armatus
ENSOCUG00000002954	CASC3	86	75.000	ENSMGAG00000013247	CASC3	99	73.659	Meleagris_gallopavo
ENSOCUG00000002954	CASC3	71	92.200	ENSMAUG00000006023	Casc3	80	91.833	Mesocricetus_auratus
ENSOCUG00000002954	CASC3	100	91.619	ENSMICG00000003321	CASC3	100	93.324	Microcebus_murinus
ENSOCUG00000002954	CASC3	100	91.750	ENSMOCG00000013644	Casc3	100	91.465	Microtus_ochrogaster
ENSOCUG00000002954	CASC3	100	77.841	ENSMODG00000013044	CASC3	92	79.830	Monodelphis_domestica
ENSOCUG00000002954	CASC3	100	91.738	MGP_CAROLIEiJ_G0017099	Casc3	100	91.595	Mus_caroli
ENSOCUG00000002954	CASC3	100	90.883	ENSMUSG00000078676	Casc3	100	90.741	Mus_musculus
ENSOCUG00000002954	CASC3	100	90.883	MGP_SPRETEiJ_G0017943	Casc3	100	90.741	Mus_spretus
ENSOCUG00000002954	CASC3	100	94.452	ENSMPUG00000014903	CASC3	100	95.021	Mustela_putorius_furo
ENSOCUG00000002954	CASC3	100	91.206	ENSMLUG00000010520	CASC3	100	92.766	Myotis_lucifugus
ENSOCUG00000002954	CASC3	100	92.165	ENSNGAG00000023121	Casc3	100	92.023	Nannospalax_galili
ENSOCUG00000002954	CASC3	100	92.745	ENSNLEG00000001598	CASC3	100	93.741	Nomascus_leucogenys
ENSOCUG00000002954	CASC3	81	92.958	ENSMEUG00000015662	CASC3	97	71.969	Notamacropus_eugenii
ENSOCUG00000002954	CASC3	73	93.333	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSOCUG00000002954	CASC3	100	88.810	ENSODEG00000017858	CASC3	100	89.377	Octodon_degus
ENSOCUG00000002954	CASC3	79	53.671	ENSOANG00000003499	-	99	56.216	Ornithorhynchus_anatinus
ENSOCUG00000002954	CASC3	99	93.991	ENSOGAG00000034486	CASC3	98	94.564	Otolemur_garnettii
ENSOCUG00000002954	CASC3	100	93.741	ENSOARG00000013239	CASC3	100	93.457	Ovis_aries
ENSOCUG00000002954	CASC3	100	93.457	ENSPPAG00000035069	CASC3	100	93.741	Pan_paniscus
ENSOCUG00000002954	CASC3	100	94.595	ENSPPRG00000023670	CASC3	100	95.164	Panthera_pardus
ENSOCUG00000002954	CASC3	91	93.721	ENSPTIG00000010891	CASC3	91	94.349	Panthera_tigris_altaica
ENSOCUG00000002954	CASC3	100	94.318	ENSPANG00000021708	CASC3	100	94.602	Papio_anubis
ENSOCUG00000002954	CASC3	99	47.170	ENSPKIG00000023186	casc3	98	46.028	Paramormyrops_kingsleyae
ENSOCUG00000002954	CASC3	100	93.305	ENSPEMG00000009774	Casc3	100	93.162	Peromyscus_maniculatus_bairdii
ENSOCUG00000002954	CASC3	100	81.392	ENSPCIG00000025678	CASC3	100	82.955	Phascolarctos_cinereus
ENSOCUG00000002954	CASC3	90	49.536	ENSPFOG00000017632	casc3	79	61.224	Poecilia_formosa
ENSOCUG00000002954	CASC3	86	53.150	ENSPLAG00000005268	casc3	63	63.441	Poecilia_latipinna
ENSOCUG00000002954	CASC3	68	47.035	ENSPMEG00000010299	casc3	73	47.912	Poecilia_mexicana
ENSOCUG00000002954	CASC3	65	67.857	ENSPREG00000011856	casc3	68	66.216	Poecilia_reticulata
ENSOCUG00000002954	CASC3	100	91.892	ENSPPYG00000008467	CASC3	100	93.172	Pongo_abelii
ENSOCUG00000002954	CASC3	100	91.051	ENSPCOG00000008183	CASC3	100	92.756	Propithecus_coquereli
ENSOCUG00000002954	CASC3	100	93.599	ENSPVAG00000008556	CASC3	100	93.883	Pteropus_vampyrus
ENSOCUG00000002954	CASC3	91	94.352	ENSRNOG00000009716	Casc3	100	94.020	Rattus_norvegicus
ENSOCUG00000002954	CASC3	100	94.460	ENSRBIG00000033289	CASC3	100	93.750	Rhinopithecus_bieti
ENSOCUG00000002954	CASC3	100	94.460	ENSRROG00000022337	CASC3	100	94.744	Rhinopithecus_roxellana
ENSOCUG00000002954	CASC3	88	91.100	ENSSBOG00000031406	CASC3	98	93.366	Saimiri_boliviensis_boliviensis
ENSOCUG00000002954	CASC3	89	84.848	ENSSHAG00000013338	CASC3	99	84.776	Sarcophilus_harrisii
ENSOCUG00000002954	CASC3	66	67.361	ENSSMAG00000016096	casc3	59	61.585	Scophthalmus_maximus
ENSOCUG00000002954	CASC3	62	75.424	ENSSLDG00000020308	casc3	77	66.906	Seriola_lalandi_dorsalis
ENSOCUG00000002954	CASC3	85	81.145	ENSSARG00000010378	CASC3	98	81.081	Sorex_araneus
ENSOCUG00000002954	CASC3	89	93.770	ENSSSCG00000017477	CASC3	98	93.740	Sus_scrofa
ENSOCUG00000002954	CASC3	74	74.432	ENSTGUG00000002300	CASC3	99	74.432	Taeniopygia_guttata
ENSOCUG00000002954	CASC3	89	47.352	ENSTNIG00000003208	casc3	90	47.352	Tetraodon_nigroviridis
ENSOCUG00000002954	CASC3	66	98.113	ENSTBEG00000017459	CASC3	67	98.113	Tupaia_belangeri
ENSOCUG00000002954	CASC3	86	84.219	ENSTTRG00000016896	CASC3	98	84.122	Tursiops_truncatus
ENSOCUG00000002954	CASC3	100	93.608	ENSUAMG00000015116	CASC3	100	94.426	Ursus_americanus
ENSOCUG00000002954	CASC3	89	93.770	ENSUMAG00000017697	CASC3	99	95.855	Ursus_maritimus
ENSOCUG00000002954	CASC3	75	99.160	ENSVPAG00000000799	CASC3	75	99.160	Vicugna_pacos
ENSOCUG00000002954	CASC3	100	95.164	ENSVVUG00000000997	CASC3	100	95.448	Vulpes_vulpes
ENSOCUG00000002954	CASC3	89	61.709	ENSXETG00000024395	casc3	98	59.155	Xenopus_tropicalis