EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOCUG00000003005 (Gene tree)
Gene ID
100351201
Gene Symbol
PABPC1L
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Plus strand
Length
21873 bases
Position
chrGL018725:163256-185128
Accession
15797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000002613PABPPF00658.181.7e-2711
ENSOCUP00000002613RRM_5PF13893.67.1e-0911
ENSOCUP00000002613RRM_1PF00076.221.3e-8714
ENSOCUP00000002613RRM_1PF00076.221.3e-8724
ENSOCUP00000002613RRM_1PF00076.221.3e-8734
ENSOCUP00000002613RRM_1PF00076.221.3e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000003005PABPC1L-2011935-ENSOCUP00000002613645 (aa)-G1SIU2
Gene Model
Click here to download ENSOCUG00000003005's gene model file
Pathways
Pathway IDPathway NameSource
ocu03013RNA transportKEGG
ocu03015mRNA surveillance pathwayKEGG
ocu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003005's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOCUG00000003005PABPC1L5332.667ENSOCUG00000023322-6030.323
ENSOCUG00000003005PABPC1L5631.579ENSOCUG00000003783TIAL17731.579
ENSOCUG00000003005PABPC1L5032.231ENSOCUG00000001311CELF16337.209
ENSOCUG00000003005PABPC1L5332.667ENSOCUG00000022568-7032.667
ENSOCUG00000003005PABPC1L5430.159ENSOCUG00000002743-6231.613
ENSOCUG00000003005PABPC1L5635.979ENSOCUG00000004614SF3B47935.979
ENSOCUG00000003005PABPC1L5861.236ENSOCUG00000010919PABPC59661.157
ENSOCUG00000003005PABPC1L5772.308ENSOCUG00000002565-9872.308
ENSOCUG00000003005PABPC1L5830.263ENSOCUG00000016262ELAVL48234.940
ENSOCUG00000003005PABPC1L5432.911ENSOCUG00000029392-5732.667
ENSOCUG00000003005PABPC1L5936.145ENSOCUG00000005891ELAVL28536.145
ENSOCUG00000003005PABPC1L5334.899ENSOCUG00000005703-6534.899
ENSOCUG00000003005PABPC1L9965.544ENSOCUG00000004354-9865.438
ENSOCUG00000003005PABPC1L9965.391ENSOCUG00000023935-9865.284
ENSOCUG00000003005PABPC1L5333.333ENSOCUG00000023674-7433.333
ENSOCUG00000003005PABPC1L5333.333ENSOCUG00000013350-5430.968
ENSOCUG00000003005PABPC1L5330.968ENSOCUG00000021007-7430.968
ENSOCUG00000003005PABPC1L5332.667ENSOCUG00000021006-6932.667
ENSOCUG00000003005PABPC1L9864.844ENSOCUG00000000562PABPC48864.420
ENSOCUG00000003005PABPC1L5630.978ENSOCUG00000011204TIA17230.978
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000003005PABPC1L10080.401ENSG00000101104PABPC1L9992.901Homo_sapiens
ENSOCUG00000003005PABPC1L9964.024ENSAPOG00000010842pabpc1l9963.761Acanthochromis_polyacanthus
ENSOCUG00000003005PABPC1L9971.299ENSAMEG00000004099PABPC1L10070.677Ailuropoda_melanoleuca
ENSOCUG00000003005PABPC1L10064.462ENSACIG00000021004-9975.824Amphilophus_citrinellus
ENSOCUG00000003005PABPC1L9963.691ENSAOCG00000006167-9963.540Amphiprion_ocellaris
ENSOCUG00000003005PABPC1L9964.352ENSAPEG00000010558-9780.693Amphiprion_percula
ENSOCUG00000003005PABPC1L9965.997ENSATEG00000007428pabpc1l9965.842Anabas_testudineus
ENSOCUG00000003005PABPC1L9969.735ENSAPLG00000008415PABPC1L9869.829Anas_platyrhynchos
ENSOCUG00000003005PABPC1L9969.632ENSACAG00000011841PABPC1L9869.632Anolis_carolinensis
ENSOCUG00000003005PABPC1L10079.012ENSANAG00000026826PABPC1L9979.012Aotus_nancymaae
ENSOCUG00000003005PABPC1L9964.165ENSACLG00000024791pabpc1l9963.706Astatotilapia_calliptera
ENSOCUG00000003005PABPC1L9966.870ENSAMXG00000013552pabpc1l9966.361Astyanax_mexicanus
ENSOCUG00000003005PABPC1L5695.238ENSBTAG00000055300-10095.238Bos_taurus
ENSOCUG00000003005PABPC1L6569.231ENSBTAG00000016849PABPC1L6584.332Bos_taurus
ENSOCUG00000003005PABPC1L10079.784ENSCJAG00000017628PABPC1L9979.784Callithrix_jacchus
ENSOCUG00000003005PABPC1L5676.437ENSCJAG00000038506-10076.437Callithrix_jacchus
ENSOCUG00000003005PABPC1L9970.827ENSCAFG00000009573PABPC1L10070.677Canis_familiaris
ENSOCUG00000003005PABPC1L9978.241ENSCAFG00020013828PABPC1L9978.241Canis_lupus_dingo
ENSOCUG00000003005PABPC1L9876.019ENSCHIG00000025759PABPC1L9175.862Capra_hircus
ENSOCUG00000003005PABPC1L10077.469ENSTSYG00000006645PABPC1L9977.469Carlito_syrichta
ENSOCUG00000003005PABPC1L9972.945ENSCAPG00000014519PABPC1L9972.945Cavia_aperea
ENSOCUG00000003005PABPC1L10075.457ENSCPOG00000013633PABPC1L9975.457Cavia_porcellus
ENSOCUG00000003005PABPC1L10078.802ENSCCAG00000023338PABPC1L9979.012Cebus_capucinus
ENSOCUG00000003005PABPC1L10080.710ENSCATG00000034065PABPC1L9980.710Cercocebus_atys
ENSOCUG00000003005PABPC1L10074.091ENSCLAG00000005298PABPC1L9975.076Chinchilla_lanigera
ENSOCUG00000003005PABPC1L10080.710ENSCSAG00000014242PABPC1L9980.710Chlorocebus_sabaeus
ENSOCUG00000003005PABPC1L6878.876ENSCPBG00000017755-9978.876Chrysemys_picta_bellii
ENSOCUG00000003005PABPC1L5181.061ENSCPBG00000007810-8181.061Chrysemys_picta_bellii
ENSOCUG00000003005PABPC1L9851.089ENSCING00000002796-9750.000Ciona_intestinalis
ENSOCUG00000003005PABPC1L9855.818ENSCSAVG00000003102-10080.822Ciona_savignyi
ENSOCUG00000003005PABPC1L9378.824ENSCSAVG00000004246-8471.000Ciona_savignyi
ENSOCUG00000003005PABPC1L10078.428ENSCANG00000037530PABPC1L9978.428Colobus_angolensis_palliatus
ENSOCUG00000003005PABPC1L9970.948ENSCGRG00001021938Pabpc1l9970.948Cricetulus_griseus_chok1gshd
ENSOCUG00000003005PABPC1L9970.948ENSCGRG00000007946Pabpc1l9970.948Cricetulus_griseus_crigri
ENSOCUG00000003005PABPC1L8275.556ENSCSEG00000021295pabpc1l9375.556Cynoglossus_semilaevis
ENSOCUG00000003005PABPC1L9964.923ENSCVAG00000015943-8685.385Cyprinodon_variegatus
ENSOCUG00000003005PABPC1L9967.127ENSDARG00000002597pabpc1l8886.923Danio_rerio
ENSOCUG00000003005PABPC1L10078.528ENSDNOG00000048450PABPC1L9978.528Dasypus_novemcinctus
ENSOCUG00000003005PABPC1L9977.812ENSDORG00000001067Pabpc1l9977.812Dipodomys_ordii
ENSOCUG00000003005PABPC1L9689.431ENSETEG00000009969PABPC1L7289.431Echinops_telfairi
ENSOCUG00000003005PABPC1L5694.643ENSEASG00005023408-10094.643Equus_asinus_asinus
ENSOCUG00000003005PABPC1L6378.166ENSECAG00000040139-8178.166Equus_caballus
ENSOCUG00000003005PABPC1L10073.538ENSEEUG00000005978PABPC1L9973.538Erinaceus_europaeus
ENSOCUG00000003005PABPC1L9966.616ENSELUG00000001811pabpc1l9482.418Esox_lucius
ENSOCUG00000003005PABPC1L9977.623ENSFCAG00000011692PABPC1L9977.623Felis_catus
ENSOCUG00000003005PABPC1L7575.960ENSFALG00000005372PABPC1L8275.354Ficedula_albicollis
ENSOCUG00000003005PABPC1L10075.809ENSFDAG00000008291PABPC1L9974.730Fukomys_damarensis
ENSOCUG00000003005PABPC1L9965.331ENSFHEG00000003398pabpc1l9965.177Fundulus_heteroclitus
ENSOCUG00000003005PABPC1L9965.794ENSGMOG00000004437pabpc1l9865.635Gadus_morhua
ENSOCUG00000003005PABPC1L9870.940ENSGALG00000004123PABPC1L9185.974Gallus_gallus
ENSOCUG00000003005PABPC1L9961.919ENSGAFG00000021057pabpc1l9961.773Gambusia_affinis
ENSOCUG00000003005PABPC1L9964.012ENSGACG00000002792pabpc1l9963.247Gasterosteus_aculeatus
ENSOCUG00000003005PABPC1L9486.364ENSGAGG00000000589PABPC1L8586.364Gopherus_agassizii
ENSOCUG00000003005PABPC1L10080.401ENSGGOG00000004584PABPC1L9980.401Gorilla_gorilla
ENSOCUG00000003005PABPC1L9964.012ENSHBUG00000006134pabpc1l9963.553Haplochromis_burtoni
ENSOCUG00000003005PABPC1L10075.382ENSHGLG00000008434PABPC1L9975.382Heterocephalus_glaber_female
ENSOCUG00000003005PABPC1L10075.382ENSHGLG00100012151PABPC1L9975.382Heterocephalus_glaber_male
ENSOCUG00000003005PABPC1L5681.461ENSHGLG00100019506-10081.461Heterocephalus_glaber_male
ENSOCUG00000003005PABPC1L8776.136ENSHCOG00000009270pabpc1l9962.675Hippocampus_comes
ENSOCUG00000003005PABPC1L5761.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSOCUG00000003005PABPC1L9966.769ENSIPUG00000012602pabpc1l9974.099Ictalurus_punctatus
ENSOCUG00000003005PABPC1L5762.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSOCUG00000003005PABPC1L10079.167ENSSTOG00000003739PABPC1L9979.167Ictidomys_tridecemlineatus
ENSOCUG00000003005PABPC1L9961.658ENSJJAG00000022406Pabpc1l9958.986Jaculus_jaculus
ENSOCUG00000003005PABPC1L9964.000ENSKMAG00000016847pabpc1l9963.889Kryptolebias_marmoratus
ENSOCUG00000003005PABPC1L9963.485ENSLBEG00000010084pabpc1l9963.485Labrus_bergylta
ENSOCUG00000003005PABPC1L9964.955ENSLACG00000005762PABPC1L9864.502Latimeria_chalumnae
ENSOCUG00000003005PABPC1L9966.564ENSLOCG00000007519pabpc1l9866.564Lepisosteus_oculatus
ENSOCUG00000003005PABPC1L9975.994ENSLAFG00000003553PABPC1L10075.994Loxodonta_africana
ENSOCUG00000003005PABPC1L10080.556ENSMFAG00000040365PABPC1L9980.556Macaca_fascicularis
ENSOCUG00000003005PABPC1L10078.858ENSMNEG00000032298PABPC1L9978.858Macaca_nemestrina
ENSOCUG00000003005PABPC1L10080.710ENSMLEG00000043139PABPC1L9980.710Mandrillus_leucophaeus
ENSOCUG00000003005PABPC1L9863.880ENSMAMG00000011854pabpc1l9763.880Mastacembelus_armatus
ENSOCUG00000003005PABPC1L9964.165ENSMZEG00005023713pabpc1l9963.706Maylandia_zebra
ENSOCUG00000003005PABPC1L9970.154ENSMGAG00000003674PABPC1L9870.154Meleagris_gallopavo
ENSOCUG00000003005PABPC1L9969.525ENSMOCG00000013186Pabpc1l9969.525Microtus_ochrogaster
ENSOCUG00000003005PABPC1L9964.760ENSMMOG00000020574-9085.385Mola_mola
ENSOCUG00000003005PABPC1L9871.496ENSMODG00000016198PABPC1L9971.339Monodelphis_domestica
ENSOCUG00000003005PABPC1L9863.679ENSMALG00000021622pabpc1l10063.679Monopterus_albus
ENSOCUG00000003005PABPC1L9970.859MGP_CAROLIEiJ_G0024627Pabpc1l9970.859Mus_caroli
ENSOCUG00000003005PABPC1L9970.706ENSMUSG00000054582Pabpc1l9970.706Mus_musculus
ENSOCUG00000003005PABPC1L9971.012MGP_PahariEiJ_G0026071Pabpc1l9971.012Mus_pahari
ENSOCUG00000003005PABPC1L9970.859MGP_SPRETEiJ_G0025549Pabpc1l9970.859Mus_spretus
ENSOCUG00000003005PABPC1L9976.080ENSMPUG00000017646PABPC1L9976.080Mustela_putorius_furo
ENSOCUG00000003005PABPC1L9970.968ENSMLUG00000006324PABPC1L9770.968Myotis_lucifugus
ENSOCUG00000003005PABPC1L9972.546ENSNGAG00000010458Pabpc1l9972.546Nannospalax_galili
ENSOCUG00000003005PABPC1L9964.506ENSNBRG00000016633pabpc1l9971.223Neolamprologus_brichardi
ENSOCUG00000003005PABPC1L7976.398ENSMEUG00000007905-8376.398Notamacropus_eugenii
ENSOCUG00000003005PABPC1L10079.908ENSOPRG00000011846PABPC1L9979.908Ochotona_princeps
ENSOCUG00000003005PABPC1L10068.266ENSODEG00000015482PABPC1L9968.266Octodon_degus
ENSOCUG00000003005PABPC1L5575.625ENSODEG00000002920-9775.625Octodon_degus
ENSOCUG00000003005PABPC1L9964.319ENSONIG00000017314pabpc1l9963.859Oreochromis_niloticus
ENSOCUG00000003005PABPC1L9161.345ENSOANG00000015793-10061.345Ornithorhynchus_anatinus
ENSOCUG00000003005PABPC1L9964.012ENSORLG00000010322pabpc1l9971.801Oryzias_latipes
ENSOCUG00000003005PABPC1L9963.859ENSORLG00020021193pabpc1l9971.801Oryzias_latipes_hni
ENSOCUG00000003005PABPC1L9963.859ENSORLG00015017018pabpc1l9971.801Oryzias_latipes_hsok
ENSOCUG00000003005PABPC1L9960.699ENSOMEG00000010789pabpc1l9960.553Oryzias_melastigma
ENSOCUG00000003005PABPC1L10079.205ENSOGAG00000032999PABPC1L9979.205Otolemur_garnettii
ENSOCUG00000003005PABPC1L10076.462ENSOARG00000004578PABPC1L9976.579Ovis_aries
ENSOCUG00000003005PABPC1L10080.247ENSPPAG00000039677PABPC1L9980.247Pan_paniscus
ENSOCUG00000003005PABPC1L5980.556ENSPPRG00000019327-9880.556Panthera_pardus
ENSOCUG00000003005PABPC1L9977.726ENSPTIG00000006524PABPC1L9977.726Panthera_tigris_altaica
ENSOCUG00000003005PABPC1L5992.593ENSPTRG00000013531PABPC1L9992.593Pan_troglodytes
ENSOCUG00000003005PABPC1L10081.327ENSPANG00000018788PABPC1L9981.327Papio_anubis
ENSOCUG00000003005PABPC1L5180.916ENSPKIG00000016810-9380.916Paramormyrops_kingsleyae
ENSOCUG00000003005PABPC1L9967.075ENSPKIG00000007322pabpc1l9966.718Paramormyrops_kingsleyae
ENSOCUG00000003005PABPC1L6085.455ENSPSIG00000013289PABPC1L9185.455Pelodiscus_sinensis
ENSOCUG00000003005PABPC1L5984.091ENSPMGG00000023117pabpc1l9284.091Periophthalmus_magnuspinnatus
ENSOCUG00000003005PABPC1L6865.174ENSPMGG00000023121-9066.667Periophthalmus_magnuspinnatus
ENSOCUG00000003005PABPC1L9968.510ENSPEMG00000020671Pabpc1l9969.479Peromyscus_maniculatus_bairdii
ENSOCUG00000003005PABPC1L9965.396ENSPFOG00000013241pabpc1l9965.244Poecilia_formosa
ENSOCUG00000003005PABPC1L9670.798ENSPLAG00000017490-9970.378Poecilia_latipinna
ENSOCUG00000003005PABPC1L5086.154ENSPLAG00000023686-9286.154Poecilia_latipinna
ENSOCUG00000003005PABPC1L9964.992ENSPMEG00000007677pabpc1l9964.840Poecilia_mexicana
ENSOCUG00000003005PABPC1L5086.154ENSPMEG00000009185-8886.154Poecilia_mexicana
ENSOCUG00000003005PABPC1L6178.372ENSPREG00000015886pabpc1l9578.372Poecilia_reticulata
ENSOCUG00000003005PABPC1L10080.556ENSPPYG00000011042PABPC1L9980.556Pongo_abelii
ENSOCUG00000003005PABPC1L5989.062ENSPCAG00000011787-7589.062Procavia_capensis
ENSOCUG00000003005PABPC1L9978.858ENSPCOG00000020630PABPC1L9978.858Propithecus_coquereli
ENSOCUG00000003005PABPC1L10075.077ENSPVAG00000012663PABPC1L9975.077Pteropus_vampyrus
ENSOCUG00000003005PABPC1L9963.256ENSPNYG00000004101pabpc1l9971.223Pundamilia_nyererei
ENSOCUG00000003005PABPC1L9960.671ENSPNAG00000021248pabpc1l9960.305Pygocentrus_nattereri
ENSOCUG00000003005PABPC1L9970.597ENSRNOG00000012750Pabpc1l9970.597Rattus_norvegicus
ENSOCUG00000003005PABPC1L10080.864ENSRBIG00000035381PABPC1L9980.864Rhinopithecus_bieti
ENSOCUG00000003005PABPC1L10080.556ENSRROG00000044498PABPC1L9980.556Rhinopithecus_roxellana
ENSOCUG00000003005PABPC1L10079.630ENSSBOG00000009532-9979.630Saimiri_boliviensis_boliviensis
ENSOCUG00000003005PABPC1L9965.962ENSSHAG00000011446PABPC1L10065.962Sarcophilus_harrisii
ENSOCUG00000003005PABPC1L9967.538ENSSFOG00015017304pabpc1l9967.026Scleropages_formosus
ENSOCUG00000003005PABPC1L9478.409ENSSMAG00000010516pabpc1l9885.271Scophthalmus_maximus
ENSOCUG00000003005PABPC1L9964.188ENSSDUG00000014743pabpc1l9964.188Seriola_dumerili
ENSOCUG00000003005PABPC1L9863.736ENSSLDG00000006981pabpc1l9077.169Seriola_lalandi_dorsalis
ENSOCUG00000003005PABPC1L9969.172ENSSPUG00000004233PABPC1L9869.172Sphenodon_punctatus
ENSOCUG00000003005PABPC1L8372.826ENSSPAG00000017137pabpc1l9672.826Stegastes_partitus
ENSOCUG00000003005PABPC1L10078.274ENSSSCG00000007382PABPC1L9977.504Sus_scrofa
ENSOCUG00000003005PABPC1L9969.760ENSTGUG00000005114PABPC1L9969.760Taeniopygia_guttata
ENSOCUG00000003005PABPC1L9863.323ENSTRUG00000011085pabpc1l9762.853Takifugu_rubripes
ENSOCUG00000003005PABPC1L10061.774ENSTNIG00000017903pabpc1l9861.315Tetraodon_nigroviridis
ENSOCUG00000003005PABPC1L9593.493ENSTBEG00000002851PABPC1L7993.493Tupaia_belangeri
ENSOCUG00000003005PABPC1L9575.689ENSTTRG00000007618PABPC1L10075.987Tursiops_truncatus
ENSOCUG00000003005PABPC1L9975.772ENSUAMG00000017682PABPC1L9975.772Ursus_americanus
ENSOCUG00000003005PABPC1L6584.367ENSUMAG00000025436PABPC1L9484.367Ursus_maritimus
ENSOCUG00000003005PABPC1L9992.095ENSVVUG00000018939PABPC1L9892.095Vulpes_vulpes
ENSOCUG00000003005PABPC1L9963.328ENSXETG00000022831pabpc1l9863.328Xenopus_tropicalis
ENSOCUG00000003005PABPC1L9964.985ENSXCOG00000005459pabpc1l9981.560Xiphophorus_couchianus
ENSOCUG00000003005PABPC1L9670.833ENSXMAG00000017135pabpc1l9970.417Xiphophorus_maculatus

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