EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000003009 (Gene tree)
Gene ID: 100338231
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 36536 bases
Position: chr7:16010805-16047340
Accession: 100338231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002616	RRM_1	PF00076.22	5.3e-60	1	4
ENSOCUP00000002616	RRM_1	PF00076.22	5.3e-60	2	4
ENSOCUP00000002616	RRM_1	PF00076.22	5.3e-60	3	4
ENSOCUP00000002616	RRM_1	PF00076.22	5.3e-60	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000003008	RBM28-201	6648	XM_002712070	ENSOCUP00000002616	767 (aa)	XP_002712116	G1SIU5

Gene Model

Click here to download ENSOCUG00000003009's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000003009	RBM28	100	82.399	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSOCUG00000003009	RBM28	56	54.646	ENSAPOG00000015512	rbm28	64	53.400	Acanthochromis_polyacanthus
ENSOCUG00000003009	RBM28	74	91.304	ENSAMEG00000004776	RBM28	72	91.304	Ailuropoda_melanoleuca
ENSOCUG00000003009	RBM28	55	55.819	ENSACIG00000023153	rbm28	100	52.008	Amphilophus_citrinellus
ENSOCUG00000003009	RBM28	56	55.088	ENSAOCG00000000462	rbm28	64	53.600	Amphiprion_ocellaris
ENSOCUG00000003009	RBM28	56	55.088	ENSAPEG00000012996	rbm28	100	50.185	Amphiprion_percula
ENSOCUG00000003009	RBM28	58	52.431	ENSATEG00000001672	rbm28	68	50.674	Anabas_testudineus
ENSOCUG00000003009	RBM28	100	81.747	ENSANAG00000033922	RBM28	100	81.747	Aotus_nancymaae
ENSOCUG00000003009	RBM28	100	49.748	ENSACLG00000025024	rbm28	64	54.435	Astatotilapia_calliptera
ENSOCUG00000003009	RBM28	57	59.453	ENSAMXG00000000763	rbm28	99	59.545	Astyanax_mexicanus
ENSOCUG00000003009	RBM28	82	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSOCUG00000003009	RBM28	100	81.486	ENSCJAG00000017731	RBM28	100	81.486	Callithrix_jacchus
ENSOCUG00000003009	RBM28	100	80.078	ENSCAFG00000001667	RBM28	100	80.208	Canis_familiaris
ENSOCUG00000003009	RBM28	100	80.078	ENSCAFG00020021648	RBM28	100	80.208	Canis_lupus_dingo
ENSOCUG00000003009	RBM28	100	80.052	ENSCHIG00000014146	RBM28	100	79.922	Capra_hircus
ENSOCUG00000003009	RBM28	100	83.051	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSOCUG00000003009	RBM28	84	59.565	ENSCAPG00000013218	RBM28	100	59.409	Cavia_aperea
ENSOCUG00000003009	RBM28	100	80.443	ENSCPOG00000006253	RBM28	100	80.183	Cavia_porcellus
ENSOCUG00000003009	RBM28	100	81.617	ENSCCAG00000035105	RBM28	100	81.747	Cebus_capucinus
ENSOCUG00000003009	RBM28	100	81.747	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSOCUG00000003009	RBM28	100	76.532	ENSCLAG00000003707	RBM28	100	76.402	Chinchilla_lanigera
ENSOCUG00000003009	RBM28	100	81.747	ENSCSAG00000010161	RBM28	100	81.747	Chlorocebus_sabaeus
ENSOCUG00000003009	RBM28	56	87.097	ENSCHOG00000001994	-	63	87.097	Choloepus_hoffmanni
ENSOCUG00000003009	RBM28	67	42.457	ENSCING00000009238	-	66	40.964	Ciona_intestinalis
ENSOCUG00000003009	RBM28	91	83.051	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSOCUG00000003009	RBM28	65	79.722	ENSCGRG00001021278	Rbm28	64	79.722	Cricetulus_griseus_chok1gshd
ENSOCUG00000003009	RBM28	100	78.470	ENSCGRG00000005098	Rbm28	100	78.210	Cricetulus_griseus_crigri
ENSOCUG00000003009	RBM28	100	49.299	ENSCSEG00000004212	rbm28	100	49.189	Cynoglossus_semilaevis
ENSOCUG00000003009	RBM28	57	55.211	ENSCVAG00000010493	rbm28	64	52.200	Cyprinodon_variegatus
ENSOCUG00000003009	RBM28	87	57.424	ENSDARG00000025332	rbm28	100	49.541	Danio_rerio
ENSOCUG00000003009	RBM28	100	82.138	ENSDNOG00000001124	RBM28	100	81.747	Dasypus_novemcinctus
ENSOCUG00000003009	RBM28	64	79.477	ENSDORG00000004184	Rbm28	97	79.678	Dipodomys_ordii
ENSOCUG00000003009	RBM28	67	38.095	FBgn0260456	CG4806	62	48.810	Drosophila_melanogaster
ENSOCUG00000003009	RBM28	100	70.207	ENSETEG00000007130	RBM28	99	69.689	Echinops_telfairi
ENSOCUG00000003009	RBM28	85	45.833	ENSEBUG00000004419	rbm28	98	40.597	Eptatretus_burgeri
ENSOCUG00000003009	RBM28	100	80.990	ENSEASG00005008528	RBM28	100	81.120	Equus_asinus_asinus
ENSOCUG00000003009	RBM28	100	80.234	ENSECAG00000007745	RBM28	100	80.390	Equus_caballus
ENSOCUG00000003009	RBM28	100	74.740	ENSEEUG00000002389	RBM28	100	73.958	Erinaceus_europaeus
ENSOCUG00000003009	RBM28	100	51.422	ENSELUG00000020602	rbm28	100	50.000	Esox_lucius
ENSOCUG00000003009	RBM28	82	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSOCUG00000003009	RBM28	100	81.877	ENSFDAG00000010169	RBM28	100	81.486	Fukomys_damarensis
ENSOCUG00000003009	RBM28	57	56.473	ENSGAFG00000004802	rbm28	98	56.222	Gambusia_affinis
ENSOCUG00000003009	RBM28	57	55.963	ENSGACG00000012612	rbm28	67	52.857	Gasterosteus_aculeatus
ENSOCUG00000003009	RBM28	81	71.569	ENSGAGG00000008873	RBM28	87	80.769	Gopherus_agassizii
ENSOCUG00000003009	RBM28	95	80.907	ENSGGOG00000004644	RBM28	97	80.495	Gorilla_gorilla
ENSOCUG00000003009	RBM28	91	51.489	ENSHBUG00000009611	rbm28	61	54.545	Haplochromis_burtoni
ENSOCUG00000003009	RBM28	100	80.704	ENSHGLG00000005409	RBM28	100	80.443	Heterocephalus_glaber_female
ENSOCUG00000003009	RBM28	100	80.313	ENSHGLG00100016458	RBM28	100	80.052	Heterocephalus_glaber_male
ENSOCUG00000003009	RBM28	81	47.865	ENSHCOG00000010597	rbm28	93	47.644	Hippocampus_comes
ENSOCUG00000003009	RBM28	55	50.355	ENSIPUG00000007103	rbm28	94	47.510	Ictalurus_punctatus
ENSOCUG00000003009	RBM28	100	83.312	ENSSTOG00000002169	RBM28	100	83.312	Ictidomys_tridecemlineatus
ENSOCUG00000003009	RBM28	100	72.727	ENSJJAG00000022400	Rbm28	100	72.597	Jaculus_jaculus
ENSOCUG00000003009	RBM28	57	54.444	ENSKMAG00000013348	rbm28	65	51.411	Kryptolebias_marmoratus
ENSOCUG00000003009	RBM28	57	55.481	ENSLBEG00000012998	rbm28	63	52.342	Labrus_bergylta
ENSOCUG00000003009	RBM28	74	56.250	ENSLACG00000010485	-	100	55.536	Latimeria_chalumnae
ENSOCUG00000003009	RBM28	87	61.340	ENSLOCG00000015541	rbm28	81	61.340	Lepisosteus_oculatus
ENSOCUG00000003009	RBM28	100	79.661	ENSLAFG00000010717	RBM28	100	79.661	Loxodonta_africana
ENSOCUG00000003009	RBM28	100	82.138	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSOCUG00000003009	RBM28	100	82.529	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSOCUG00000003009	RBM28	100	82.422	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSOCUG00000003009	RBM28	84	81.895	ENSMLEG00000037717	RBM28	100	81.263	Mandrillus_leucophaeus
ENSOCUG00000003009	RBM28	100	50.000	ENSMAMG00000008525	rbm28	100	50.960	Mastacembelus_armatus
ENSOCUG00000003009	RBM28	93	48.853	ENSMZEG00005019625	rbm28	69	54.435	Maylandia_zebra
ENSOCUG00000003009	RBM28	100	75.866	ENSMAUG00000002263	Rbm28	100	76.380	Mesocricetus_auratus
ENSOCUG00000003009	RBM28	93	79.945	ENSMICG00000000107	RBM28	100	80.360	Microcebus_murinus
ENSOCUG00000003009	RBM28	100	78.153	ENSMOCG00000014615	Rbm28	100	78.023	Microtus_ochrogaster
ENSOCUG00000003009	RBM28	57	54.817	ENSMMOG00000008600	rbm28	100	52.697	Mola_mola
ENSOCUG00000003009	RBM28	100	70.207	ENSMODG00000015151	RBM28	100	70.801	Monodelphis_domestica
ENSOCUG00000003009	RBM28	57	55.056	ENSMALG00000006419	rbm28	63	51.829	Monopterus_albus
ENSOCUG00000003009	RBM28	100	79.167	MGP_CAROLIEiJ_G0028162	Rbm28	100	78.906	Mus_caroli
ENSOCUG00000003009	RBM28	100	78.125	ENSMUSG00000029701	Rbm28	100	77.865	Mus_musculus
ENSOCUG00000003009	RBM28	100	78.516	MGP_PahariEiJ_G0021920	Rbm28	100	78.385	Mus_pahari
ENSOCUG00000003009	RBM28	100	78.255	MGP_SPRETEiJ_G0029162	Rbm28	100	77.995	Mus_spretus
ENSOCUG00000003009	RBM28	100	79.297	ENSMPUG00000006511	RBM28	100	79.297	Mustela_putorius_furo
ENSOCUG00000003009	RBM28	100	81.747	ENSMLUG00000002186	RBM28	100	81.617	Myotis_lucifugus
ENSOCUG00000003009	RBM28	100	75.228	ENSNGAG00000017946	-	100	75.228	Nannospalax_galili
ENSOCUG00000003009	RBM28	100	77.966	ENSNGAG00000006480	-	100	77.836	Nannospalax_galili
ENSOCUG00000003009	RBM28	100	82.660	ENSNLEG00000012307	RBM28	100	82.399	Nomascus_leucogenys
ENSOCUG00000003009	RBM28	80	82.500	ENSMEUG00000009611	RBM28	91	82.500	Notamacropus_eugenii
ENSOCUG00000003009	RBM28	90	79.849	ENSOPRG00000015140	RBM28	90	78.531	Ochotona_princeps
ENSOCUG00000003009	RBM28	100	76.432	ENSODEG00000003213	-	100	76.823	Octodon_degus
ENSOCUG00000003009	RBM28	75	84.962	ENSODEG00000013217	-	84	84.962	Octodon_degus
ENSOCUG00000003009	RBM28	57	54.212	ENSONIG00000014924	rbm28	63	54.004	Oreochromis_niloticus
ENSOCUG00000003009	RBM28	100	63.077	ENSOANG00000000815	-	66	63.976	Ornithorhynchus_anatinus
ENSOCUG00000003009	RBM28	58	55.315	ENSORLG00000009636	rbm28	64	53.479	Oryzias_latipes
ENSOCUG00000003009	RBM28	58	55.142	ENSORLG00020002123	rbm28	66	53.414	Oryzias_latipes_hni
ENSOCUG00000003009	RBM28	84	58.738	ENSORLG00015015030	rbm28	98	58.738	Oryzias_latipes_hsok
ENSOCUG00000003009	RBM28	57	57.174	ENSOMEG00000007801	rbm28	66	54.241	Oryzias_melastigma
ENSOCUG00000003009	RBM28	94	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSOCUG00000003009	RBM28	100	79.610	ENSOARG00000002547	RBM28	100	79.481	Ovis_aries
ENSOCUG00000003009	RBM28	100	82.399	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSOCUG00000003009	RBM28	82	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSOCUG00000003009	RBM28	82	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSOCUG00000003009	RBM28	100	82.660	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSOCUG00000003009	RBM28	100	82.399	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSOCUG00000003009	RBM28	99	50.368	ENSPKIG00000023453	rbm28	68	51.412	Paramormyrops_kingsleyae
ENSOCUG00000003009	RBM28	89	55.660	ENSPMGG00000012840	rbm28	100	48.631	Periophthalmus_magnuspinnatus
ENSOCUG00000003009	RBM28	100	76.172	ENSPEMG00000020673	Rbm28	100	76.432	Peromyscus_maniculatus_bairdii
ENSOCUG00000003009	RBM28	94	68.707	ENSPCIG00000012810	RBM28	100	69.666	Phascolarctos_cinereus
ENSOCUG00000003009	RBM28	57	56.054	ENSPFOG00000018209	rbm28	100	48.500	Poecilia_formosa
ENSOCUG00000003009	RBM28	57	55.204	ENSPLAG00000016078	rbm28	96	49.486	Poecilia_latipinna
ENSOCUG00000003009	RBM28	57	55.928	ENSPMEG00000004292	rbm28	100	48.439	Poecilia_mexicana
ENSOCUG00000003009	RBM28	56	55.530	ENSPREG00000014287	rbm28	79	53.430	Poecilia_reticulata
ENSOCUG00000003009	RBM28	100	82.269	ENSPPYG00000017975	RBM28	100	82.269	Pongo_abelii
ENSOCUG00000003009	RBM28	73	74.719	ENSPCAG00000008223	RBM28	83	74.659	Procavia_capensis
ENSOCUG00000003009	RBM28	100	82.185	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSOCUG00000003009	RBM28	75	94.762	ENSPVAG00000005443	RBM28	76	94.762	Pteropus_vampyrus
ENSOCUG00000003009	RBM28	100	49.323	ENSPNYG00000014003	rbm28	64	54.032	Pundamilia_nyererei
ENSOCUG00000003009	RBM28	100	77.995	ENSRNOG00000005468	Rbm28	100	77.865	Rattus_norvegicus
ENSOCUG00000003009	RBM28	100	82.660	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSOCUG00000003009	RBM28	100	82.008	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSOCUG00000003009	RBM28	86	81.462	ENSSBOG00000012308	RBM28	100	79.634	Saimiri_boliviensis_boliviensis
ENSOCUG00000003009	RBM28	96	65.995	ENSSHAG00000017017	RBM28	99	65.949	Sarcophilus_harrisii
ENSOCUG00000003009	RBM28	58	54.343	ENSSMAG00000003885	rbm28	98	52.490	Scophthalmus_maximus
ENSOCUG00000003009	RBM28	57	56.512	ENSSLDG00000020099	rbm28	64	53.400	Seriola_lalandi_dorsalis
ENSOCUG00000003009	RBM28	76	84.539	ENSSARG00000008303	RBM28	81	84.539	Sorex_araneus
ENSOCUG00000003009	RBM28	65	72.059	ENSSPUG00000000838	RBM28	80	72.059	Sphenodon_punctatus
ENSOCUG00000003009	RBM28	57	53.493	ENSSPAG00000023305	rbm28	100	49.795	Stegastes_partitus
ENSOCUG00000003009	RBM28	100	81.095	ENSSSCG00000031847	RBM28	100	80.443	Sus_scrofa
ENSOCUG00000003009	RBM28	58	55.292	ENSTRUG00000013311	rbm28	99	48.962	Takifugu_rubripes
ENSOCUG00000003009	RBM28	99	51.091	ENSTNIG00000017962	rbm28	64	52.525	Tetraodon_nigroviridis
ENSOCUG00000003009	RBM28	86	84.661	ENSTBEG00000012749	RBM28	86	84.661	Tupaia_belangeri
ENSOCUG00000003009	RBM28	100	78.831	ENSTTRG00000013647	RBM28	62	85.319	Tursiops_truncatus
ENSOCUG00000003009	RBM28	100	74.189	ENSUAMG00000006949	RBM28	100	74.319	Ursus_americanus
ENSOCUG00000003009	RBM28	100	81.380	ENSUMAG00000005997	RBM28	100	80.859	Ursus_maritimus
ENSOCUG00000003009	RBM28	85	71.560	ENSVPAG00000008304	RBM28	86	71.818	Vicugna_pacos
ENSOCUG00000003009	RBM28	100	79.791	ENSVVUG00000007270	RBM28	100	79.922	Vulpes_vulpes
ENSOCUG00000003009	RBM28	99	55.019	ENSXETG00000009271	rbm28	99	55.019	Xenopus_tropicalis
ENSOCUG00000003009	RBM28	57	54.649	ENSXCOG00000020357	rbm28	99	52.720	Xiphophorus_couchianus
ENSOCUG00000003009	RBM28	55	56.279	ENSXMAG00000004415	rbm28	62	54.393	Xiphophorus_maculatus