EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000003170 (Gene tree)
Gene ID: 100353886
Gene Symbol: SBDS
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 7669 bases
Position: chrGL018882:163005-170673
Accession: 100353886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002752	SBDS	PF01172.18	7.1e-33	1	1
ENSOCUP00000002752	SBDS_C	PF09377.10	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000003167	SBDS-201	3374	-	ENSOCUP00000002752	250 (aa)	XP_002723158	G1SJ57

Gene Model

Click here to download ENSOCUG00000003170's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000003170	SBDS	100	97.600	ENSG00000126524	SBDS	100	97.600	Homo_sapiens
ENSOCUG00000003170	SBDS	99	85.141	ENSAPOG00000014285	sbds	100	85.141	Acanthochromis_polyacanthus
ENSOCUG00000003170	SBDS	100	96.800	ENSAMEG00000018167	SBDS	100	96.800	Ailuropoda_melanoleuca
ENSOCUG00000003170	SBDS	99	84.524	ENSACIG00000007308	sbds	100	84.524	Amphilophus_citrinellus
ENSOCUG00000003170	SBDS	99	85.141	ENSAOCG00000016770	sbds	100	85.141	Amphiprion_ocellaris
ENSOCUG00000003170	SBDS	99	85.542	ENSAPEG00000015897	sbds	100	85.542	Amphiprion_percula
ENSOCUG00000003170	SBDS	99	85.542	ENSATEG00000006901	sbds	100	85.542	Anabas_testudineus
ENSOCUG00000003170	SBDS	83	96.618	ENSANAG00000037501	-	100	96.618	Aotus_nancymaae
ENSOCUG00000003170	SBDS	92	90.476	ENSANAG00000024342	-	97	90.476	Aotus_nancymaae
ENSOCUG00000003170	SBDS	99	85.944	ENSACLG00000018750	sbds	100	85.944	Astatotilapia_calliptera
ENSOCUG00000003170	SBDS	100	85.600	ENSAMXG00000005361	sbds	100	85.600	Astyanax_mexicanus
ENSOCUG00000003170	SBDS	100	97.200	ENSBTAG00000004051	SBDS	100	97.200	Bos_taurus
ENSOCUG00000003170	SBDS	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSOCUG00000003170	SBDS	100	97.200	ENSCJAG00000041007	SBDS	100	97.200	Callithrix_jacchus
ENSOCUG00000003170	SBDS	100	94.841	ENSCAFG00000010797	SBDS	100	94.841	Canis_familiaris
ENSOCUG00000003170	SBDS	100	97.200	ENSCAFG00020005357	SBDS	100	97.200	Canis_lupus_dingo
ENSOCUG00000003170	SBDS	100	97.200	ENSCHIG00000026854	SBDS	100	97.200	Capra_hircus
ENSOCUG00000003170	SBDS	100	97.600	ENSTSYG00000033822	SBDS	100	97.600	Carlito_syrichta
ENSOCUG00000003170	SBDS	66	96.951	ENSCAPG00000006634	SBDS	100	96.951	Cavia_aperea
ENSOCUG00000003170	SBDS	100	97.600	ENSCPOG00000036143	SBDS	100	97.600	Cavia_porcellus
ENSOCUG00000003170	SBDS	100	97.200	ENSCCAG00000020671	SBDS	100	97.200	Cebus_capucinus
ENSOCUG00000003170	SBDS	100	97.600	ENSCATG00000039026	SBDS	100	97.600	Cercocebus_atys
ENSOCUG00000003170	SBDS	100	98.000	ENSCLAG00000005721	-	100	98.000	Chinchilla_lanigera
ENSOCUG00000003170	SBDS	99	70.565	ENSCLAG00000002113	-	99	70.565	Chinchilla_lanigera
ENSOCUG00000003170	SBDS	100	97.600	ENSCSAG00000018275	SBDS	100	97.600	Chlorocebus_sabaeus
ENSOCUG00000003170	SBDS	100	92.000	ENSCHOG00000003795	SBDS	100	92.000	Choloepus_hoffmanni
ENSOCUG00000003170	SBDS	100	88.800	ENSCPBG00000014893	SBDS	100	88.800	Chrysemys_picta_bellii
ENSOCUG00000003170	SBDS	99	68.000	ENSCSAVG00000011811	-	100	68.000	Ciona_savignyi
ENSOCUG00000003170	SBDS	100	97.200	ENSCANG00000032368	SBDS	100	97.200	Colobus_angolensis_palliatus
ENSOCUG00000003170	SBDS	66	94.512	ENSCGRG00001019886	Sbds	100	94.512	Cricetulus_griseus_chok1gshd
ENSOCUG00000003170	SBDS	83	95.169	ENSCGRG00000009211	Sbds	100	95.169	Cricetulus_griseus_crigri
ENSOCUG00000003170	SBDS	99	83.534	ENSCSEG00000005798	sbds	100	83.534	Cynoglossus_semilaevis
ENSOCUG00000003170	SBDS	99	83.534	ENSCVAG00000001053	sbds	100	83.534	Cyprinodon_variegatus
ENSOCUG00000003170	SBDS	100	85.200	ENSDARG00000027803	sbds	100	85.200	Danio_rerio
ENSOCUG00000003170	SBDS	100	96.400	ENSDNOG00000041174	SBDS	100	96.400	Dasypus_novemcinctus
ENSOCUG00000003170	SBDS	100	95.200	ENSDORG00000026218	Sbds	100	95.200	Dipodomys_ordii
ENSOCUG00000003170	SBDS	90	60.526	FBgn0035714	CG8549	99	60.643	Drosophila_melanogaster
ENSOCUG00000003170	SBDS	93	58.798	ENSEBUG00000015780	sbds	92	64.734	Eptatretus_burgeri
ENSOCUG00000003170	SBDS	100	97.200	ENSEASG00005008821	SBDS	100	97.200	Equus_asinus_asinus
ENSOCUG00000003170	SBDS	100	97.200	ENSECAG00000008202	SBDS	100	97.200	Equus_caballus
ENSOCUG00000003170	SBDS	83	75.481	ENSEEUG00000004768	SBDS	100	75.481	Erinaceus_europaeus
ENSOCUG00000003170	SBDS	100	83.600	ENSELUG00000008382	sbds	100	83.600	Esox_lucius
ENSOCUG00000003170	SBDS	100	97.200	ENSFCAG00000022142	SBDS	100	97.200	Felis_catus
ENSOCUG00000003170	SBDS	100	89.600	ENSFALG00000013808	SBDS	100	89.600	Ficedula_albicollis
ENSOCUG00000003170	SBDS	100	97.600	ENSFDAG00000018947	-	100	97.600	Fukomys_damarensis
ENSOCUG00000003170	SBDS	99	80.321	ENSFHEG00000000708	sbds	100	80.321	Fundulus_heteroclitus
ENSOCUG00000003170	SBDS	100	85.200	ENSGMOG00000018356	sbds	99	85.200	Gadus_morhua
ENSOCUG00000003170	SBDS	100	88.400	ENSGALG00000027989	SBDS	100	88.400	Gallus_gallus
ENSOCUG00000003170	SBDS	92	80.435	ENSGAFG00000014204	sbds	100	80.435	Gambusia_affinis
ENSOCUG00000003170	SBDS	99	83.534	ENSGACG00000012697	sbds	100	83.534	Gasterosteus_aculeatus
ENSOCUG00000003170	SBDS	86	88.785	ENSGAGG00000022402	SBDS	100	88.785	Gopherus_agassizii
ENSOCUG00000003170	SBDS	96	78.008	ENSGGOG00000040023	-	92	78.008	Gorilla_gorilla
ENSOCUG00000003170	SBDS	99	85.944	ENSHBUG00000002660	sbds	100	85.944	Haplochromis_burtoni
ENSOCUG00000003170	SBDS	100	96.000	ENSHGLG00000009671	SBDS	100	96.000	Heterocephalus_glaber_female
ENSOCUG00000003170	SBDS	100	96.000	ENSHGLG00100011332	SBDS	100	96.000	Heterocephalus_glaber_male
ENSOCUG00000003170	SBDS	99	81.928	ENSHCOG00000018606	sbds	100	81.928	Hippocampus_comes
ENSOCUG00000003170	SBDS	100	86.800	ENSIPUG00000006536	sbds	100	86.800	Ictalurus_punctatus
ENSOCUG00000003170	SBDS	100	93.600	ENSJJAG00000012033	-	100	93.600	Jaculus_jaculus
ENSOCUG00000003170	SBDS	100	70.356	ENSJJAG00000003934	-	100	70.356	Jaculus_jaculus
ENSOCUG00000003170	SBDS	99	85.944	ENSKMAG00000018542	sbds	100	85.944	Kryptolebias_marmoratus
ENSOCUG00000003170	SBDS	99	81.526	ENSLBEG00000016687	sbds	100	81.526	Labrus_bergylta
ENSOCUG00000003170	SBDS	100	70.472	ENSLACG00000018916	SBDS	100	70.472	Latimeria_chalumnae
ENSOCUG00000003170	SBDS	100	87.600	ENSLOCG00000004073	sbds	100	87.600	Lepisosteus_oculatus
ENSOCUG00000003170	SBDS	100	96.000	ENSLAFG00000008763	SBDS	100	96.000	Loxodonta_africana
ENSOCUG00000003170	SBDS	100	97.600	ENSMFAG00000032620	SBDS	100	97.600	Macaca_fascicularis
ENSOCUG00000003170	SBDS	100	97.600	ENSMMUG00000045653	SBDS	100	97.600	Macaca_mulatta
ENSOCUG00000003170	SBDS	100	97.600	ENSMNEG00000031523	SBDS	100	97.600	Macaca_nemestrina
ENSOCUG00000003170	SBDS	100	75.197	ENSMLEG00000036826	SBDS	100	75.197	Mandrillus_leucophaeus
ENSOCUG00000003170	SBDS	99	85.141	ENSMAMG00000016062	sbds	100	85.141	Mastacembelus_armatus
ENSOCUG00000003170	SBDS	99	85.944	ENSMZEG00005024385	sbds	100	85.944	Maylandia_zebra
ENSOCUG00000003170	SBDS	100	88.400	ENSMGAG00000002119	SBDS	100	88.400	Meleagris_gallopavo
ENSOCUG00000003170	SBDS	99	76.707	ENSMAUG00000022214	-	100	76.707	Mesocricetus_auratus
ENSOCUG00000003170	SBDS	100	96.800	ENSMICG00000014366	SBDS	100	96.800	Microcebus_murinus
ENSOCUG00000003170	SBDS	100	96.800	ENSMOCG00000011739	Sbds	100	96.800	Microtus_ochrogaster
ENSOCUG00000003170	SBDS	99	74.800	ENSMMOG00000005061	sbds	100	74.400	Mola_mola
ENSOCUG00000003170	SBDS	100	95.200	ENSMODG00000006644	SBDS	100	95.200	Monodelphis_domestica
ENSOCUG00000003170	SBDS	99	85.141	ENSMALG00000010219	sbds	100	85.141	Monopterus_albus
ENSOCUG00000003170	SBDS	100	96.800	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSOCUG00000003170	SBDS	100	96.400	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSOCUG00000003170	SBDS	100	96.400	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSOCUG00000003170	SBDS	100	96.400	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSOCUG00000003170	SBDS	67	93.452	ENSMPUG00000016192	SBDS	97	93.452	Mustela_putorius_furo
ENSOCUG00000003170	SBDS	73	93.956	ENSMLUG00000013575	SBDS	100	93.956	Myotis_lucifugus
ENSOCUG00000003170	SBDS	100	96.800	ENSNGAG00000012093	Sbds	100	96.800	Nannospalax_galili
ENSOCUG00000003170	SBDS	99	85.944	ENSNBRG00000017027	sbds	100	85.944	Neolamprologus_brichardi
ENSOCUG00000003170	SBDS	100	97.600	ENSNLEG00000013288	SBDS	100	97.600	Nomascus_leucogenys
ENSOCUG00000003170	SBDS	100	97.600	ENSOPRG00000008721	SBDS	100	97.600	Ochotona_princeps
ENSOCUG00000003170	SBDS	99	75.904	ENSODEG00000001116	-	99	75.904	Octodon_degus
ENSOCUG00000003170	SBDS	99	71.888	ENSODEG00000000137	-	84	75.502	Octodon_degus
ENSOCUG00000003170	SBDS	100	87.200	ENSODEG00000019253	-	84	87.200	Octodon_degus
ENSOCUG00000003170	SBDS	99	85.141	ENSONIG00000005874	sbds	100	85.141	Oreochromis_niloticus
ENSOCUG00000003170	SBDS	83	90.338	ENSOANG00000007674	-	100	90.338	Ornithorhynchus_anatinus
ENSOCUG00000003170	SBDS	99	82.329	ENSORLG00000023489	sbds	100	82.329	Oryzias_latipes
ENSOCUG00000003170	SBDS	99	81.928	ENSORLG00020019282	sbds	100	81.928	Oryzias_latipes_hni
ENSOCUG00000003170	SBDS	99	81.928	ENSORLG00015008005	sbds	100	81.928	Oryzias_latipes_hsok
ENSOCUG00000003170	SBDS	99	82.731	ENSOMEG00000022747	sbds	100	82.731	Oryzias_melastigma
ENSOCUG00000003170	SBDS	100	96.000	ENSOGAG00000009011	-	100	96.000	Otolemur_garnettii
ENSOCUG00000003170	SBDS	100	80.000	ENSOGAG00000015036	-	100	80.000	Otolemur_garnettii
ENSOCUG00000003170	SBDS	100	97.200	ENSOARG00000010609	SBDS	100	97.200	Ovis_aries
ENSOCUG00000003170	SBDS	100	96.800	ENSPPAG00000043889	-	100	96.800	Pan_paniscus
ENSOCUG00000003170	SBDS	100	97.200	ENSPPRG00000002307	SBDS	100	97.200	Panthera_pardus
ENSOCUG00000003170	SBDS	100	97.200	ENSPTIG00000021308	SBDS	100	97.200	Panthera_tigris_altaica
ENSOCUG00000003170	SBDS	100	82.400	ENSPTRG00000047744	-	100	82.400	Pan_troglodytes
ENSOCUG00000003170	SBDS	87	94.931	ENSPTRG00000048174	-	96	94.931	Pan_troglodytes
ENSOCUG00000003170	SBDS	100	82.800	ENSPTRG00000050835	-	100	82.800	Pan_troglodytes
ENSOCUG00000003170	SBDS	100	97.600	ENSPTRG00000019254	SBDS	100	97.600	Pan_troglodytes
ENSOCUG00000003170	SBDS	100	97.600	ENSPANG00000004078	SBDS	100	97.600	Papio_anubis
ENSOCUG00000003170	SBDS	100	85.200	ENSPKIG00000006489	sbds	100	85.200	Paramormyrops_kingsleyae
ENSOCUG00000003170	SBDS	83	89.372	ENSPSIG00000014603	SBDS	99	89.372	Pelodiscus_sinensis
ENSOCUG00000003170	SBDS	99	83.936	ENSPMGG00000004246	sbds	100	83.936	Periophthalmus_magnuspinnatus
ENSOCUG00000003170	SBDS	100	96.400	ENSPEMG00000008728	Sbds	100	96.400	Peromyscus_maniculatus_bairdii
ENSOCUG00000003170	SBDS	100	94.400	ENSPCIG00000029718	SBDS	100	94.400	Phascolarctos_cinereus
ENSOCUG00000003170	SBDS	99	82.731	ENSPFOG00000015837	sbds	100	82.731	Poecilia_formosa
ENSOCUG00000003170	SBDS	99	82.731	ENSPLAG00000003641	sbds	100	82.731	Poecilia_latipinna
ENSOCUG00000003170	SBDS	99	82.731	ENSPMEG00000019483	sbds	100	82.731	Poecilia_mexicana
ENSOCUG00000003170	SBDS	99	82.329	ENSPREG00000018758	sbds	100	82.329	Poecilia_reticulata
ENSOCUG00000003170	SBDS	100	97.600	ENSPPYG00000017513	SBDS	100	97.600	Pongo_abelii
ENSOCUG00000003170	SBDS	100	96.400	ENSPCOG00000021098	SBDS	100	96.400	Propithecus_coquereli
ENSOCUG00000003170	SBDS	100	96.800	ENSPVAG00000009369	SBDS	100	96.800	Pteropus_vampyrus
ENSOCUG00000003170	SBDS	99	85.542	ENSPNYG00000022403	sbds	100	85.542	Pundamilia_nyererei
ENSOCUG00000003170	SBDS	100	87.200	ENSPNAG00000001120	sbds	100	87.200	Pygocentrus_nattereri
ENSOCUG00000003170	SBDS	100	96.800	ENSRNOG00000000888	Sbds	100	96.800	Rattus_norvegicus
ENSOCUG00000003170	SBDS	100	97.600	ENSRBIG00000035557	SBDS	100	97.600	Rhinopithecus_bieti
ENSOCUG00000003170	SBDS	100	80.000	ENSRROG00000041986	-	100	78.400	Rhinopithecus_roxellana
ENSOCUG00000003170	SBDS	100	97.600	ENSRROG00000040842	-	100	97.600	Rhinopithecus_roxellana
ENSOCUG00000003170	SBDS	96	43.265	YLR022C	-	96	42.510	Saccharomyces_cerevisiae
ENSOCUG00000003170	SBDS	93	96.552	ENSSBOG00000022460	SBDS	100	96.552	Saimiri_boliviensis_boliviensis
ENSOCUG00000003170	SBDS	100	82.000	ENSSHAG00000010263	SBDS	100	82.000	Sarcophilus_harrisii
ENSOCUG00000003170	SBDS	100	86.400	ENSSFOG00015001108	sbds	100	86.400	Scleropages_formosus
ENSOCUG00000003170	SBDS	99	85.944	ENSSMAG00000020506	sbds	100	85.944	Scophthalmus_maximus
ENSOCUG00000003170	SBDS	99	84.739	ENSSDUG00000001528	sbds	100	84.739	Seriola_dumerili
ENSOCUG00000003170	SBDS	99	85.141	ENSSLDG00000003659	sbds	100	85.141	Seriola_lalandi_dorsalis
ENSOCUG00000003170	SBDS	73	97.674	ENSSARG00000001899	-	73	97.674	Sorex_araneus
ENSOCUG00000003170	SBDS	61	97.386	ENSSARG00000013132	-	100	97.386	Sorex_araneus
ENSOCUG00000003170	SBDS	100	86.400	ENSSPUG00000002699	SBDS	100	86.400	Sphenodon_punctatus
ENSOCUG00000003170	SBDS	99	85.141	ENSSPAG00000016419	sbds	100	77.600	Stegastes_partitus
ENSOCUG00000003170	SBDS	100	96.800	ENSSSCG00000007732	SBDS	100	96.800	Sus_scrofa
ENSOCUG00000003170	SBDS	66	90.303	ENSTGUG00000003426	SBDS	99	90.303	Taeniopygia_guttata
ENSOCUG00000003170	SBDS	99	85.141	ENSTRUG00000021443	sbds	100	85.141	Takifugu_rubripes
ENSOCUG00000003170	SBDS	99	83.936	ENSTNIG00000019000	sbds	100	83.936	Tetraodon_nigroviridis
ENSOCUG00000003170	SBDS	83	81.731	ENSTBEG00000001178	SBDS	100	81.731	Tupaia_belangeri
ENSOCUG00000003170	SBDS	100	77.600	ENSTTRG00000003921	SBDS	100	77.600	Tursiops_truncatus
ENSOCUG00000003170	SBDS	100	96.800	ENSUAMG00000001326	SBDS	100	96.800	Ursus_americanus
ENSOCUG00000003170	SBDS	100	96.800	ENSUMAG00000015353	SBDS	100	96.800	Ursus_maritimus
ENSOCUG00000003170	SBDS	100	97.200	ENSVVUG00000016478	SBDS	100	97.200	Vulpes_vulpes
ENSOCUG00000003170	SBDS	100	86.000	ENSXETG00000010093	sbds	100	86.000	Xenopus_tropicalis
ENSOCUG00000003170	SBDS	99	75.100	ENSXCOG00000010639	sbds	100	75.100	Xiphophorus_couchianus
ENSOCUG00000003170	SBDS	99	83.133	ENSXMAG00000006065	sbds	100	83.133	Xiphophorus_maculatus