EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000003337 (Gene tree)
Gene ID: 100352721
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 13158 bases
Position: chrGL018786:482448-495605
Accession: 100352721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002895	RRM_1	PF00076.22	4.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000003338	RBM42-201	5964	-	ENSOCUP00000002895	450 (aa)	XP_008247748	G1SJH8

Gene Model

Click here to download ENSOCUG00000003337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000003337	RBM42	100	98.670	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSOCUG00000003337	RBM42	100	91.079	ENSAMEG00000000524	RBM42	100	90.871	Ailuropoda_melanoleuca
ENSOCUG00000003337	RBM42	100	95.633	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSOCUG00000003337	RBM42	100	96.070	ENSBTAG00000013440	RBM42	100	96.070	Bos_taurus
ENSOCUG00000003337	RBM42	100	97.561	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSOCUG00000003337	RBM42	100	88.865	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSOCUG00000003337	RBM42	100	97.118	ENSCHIG00000009518	RBM42	100	97.118	Capra_hircus
ENSOCUG00000003337	RBM42	100	95.425	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSOCUG00000003337	RBM42	79	90.674	ENSCAPG00000009566	RBM42	99	90.674	Cavia_aperea
ENSOCUG00000003337	RBM42	100	97.339	ENSCPOG00000012365	RBM42	99	97.339	Cavia_porcellus
ENSOCUG00000003337	RBM42	100	96.070	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSOCUG00000003337	RBM42	100	98.226	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSOCUG00000003337	RBM42	100	97.118	ENSCLAG00000012865	RBM42	99	97.118	Chinchilla_lanigera
ENSOCUG00000003337	RBM42	100	98.226	ENSCSAG00000004422	RBM42	100	98.226	Chlorocebus_sabaeus
ENSOCUG00000003337	RBM42	100	85.371	ENSCANG00000030272	RBM42	100	85.371	Colobus_angolensis_palliatus
ENSOCUG00000003337	RBM42	100	95.787	ENSCGRG00001018540	Rbm42	99	95.787	Cricetulus_griseus_chok1gshd
ENSOCUG00000003337	RBM42	100	96.035	ENSDNOG00000037397	RBM42	100	96.035	Dasypus_novemcinctus
ENSOCUG00000003337	RBM42	100	96.009	ENSDORG00000013001	Rbm42	99	96.009	Dipodomys_ordii
ENSOCUG00000003337	RBM42	75	94.203	ENSETEG00000007878	RBM42	71	94.643	Echinops_telfairi
ENSOCUG00000003337	RBM42	100	97.339	ENSEASG00005001074	RBM42	100	97.339	Equus_asinus_asinus
ENSOCUG00000003337	RBM42	100	97.339	ENSECAG00000018215	RBM42	100	97.339	Equus_caballus
ENSOCUG00000003337	RBM42	100	95.852	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSOCUG00000003337	RBM42	100	95.806	ENSFDAG00000007440	RBM42	99	95.806	Fukomys_damarensis
ENSOCUG00000003337	RBM42	100	98.448	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSOCUG00000003337	RBM42	100	95.122	ENSHGLG00000008418	RBM42	99	95.122	Heterocephalus_glaber_female
ENSOCUG00000003337	RBM42	100	95.122	ENSHGLG00100018667	RBM42	99	95.122	Heterocephalus_glaber_male
ENSOCUG00000003337	RBM42	100	98.004	ENSSTOG00000013050	RBM42	99	98.004	Ictidomys_tridecemlineatus
ENSOCUG00000003337	RBM42	100	95.787	ENSJJAG00000010421	Rbm42	99	95.787	Jaculus_jaculus
ENSOCUG00000003337	RBM42	98	87.872	ENSLAFG00000014993	RBM42	99	88.727	Loxodonta_africana
ENSOCUG00000003337	RBM42	100	98.226	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSOCUG00000003337	RBM42	100	96.725	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSOCUG00000003337	RBM42	100	98.226	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSOCUG00000003337	RBM42	100	98.448	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSOCUG00000003337	RBM42	100	96.507	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSOCUG00000003337	RBM42	100	95.565	ENSMOCG00000000405	Rbm42	99	95.565	Microtus_ochrogaster
ENSOCUG00000003337	RBM42	100	96.452	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.452	Mus_caroli
ENSOCUG00000003337	RBM42	100	96.452	ENSMUSG00000036733	Rbm42	99	96.452	Mus_musculus
ENSOCUG00000003337	RBM42	100	96.452	MGP_PahariEiJ_G0012770	Rbm42	99	96.452	Mus_pahari
ENSOCUG00000003337	RBM42	100	96.452	MGP_SPRETEiJ_G0030632	Rbm42	99	96.452	Mus_spretus
ENSOCUG00000003337	RBM42	100	97.561	ENSMPUG00000006288	RBM42	100	97.561	Mustela_putorius_furo
ENSOCUG00000003337	RBM42	100	90.417	ENSMLUG00000011334	RBM42	100	90.417	Myotis_lucifugus
ENSOCUG00000003337	RBM42	100	95.565	ENSNGAG00000019698	Rbm42	99	95.565	Nannospalax_galili
ENSOCUG00000003337	RBM42	67	99.003	ENSNLEG00000011272	-	99	84.656	Nomascus_leucogenys
ENSOCUG00000003337	RBM42	96	76.774	ENSMEUG00000016300	RBM42	100	76.735	Notamacropus_eugenii
ENSOCUG00000003337	RBM42	100	89.121	ENSOPRG00000001229	RBM42	100	87.866	Ochotona_princeps
ENSOCUG00000003337	RBM42	100	97.339	ENSODEG00000013705	RBM42	99	97.339	Octodon_degus
ENSOCUG00000003337	RBM42	100	91.250	ENSOGAG00000004144	RBM42	100	91.250	Otolemur_garnettii
ENSOCUG00000003337	RBM42	98	84.435	ENSOARG00000004926	RBM42	98	87.866	Ovis_aries
ENSOCUG00000003337	RBM42	100	97.561	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSOCUG00000003337	RBM42	100	95.852	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSOCUG00000003337	RBM42	100	95.415	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSOCUG00000003337	RBM42	100	98.448	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSOCUG00000003337	RBM42	100	96.725	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSOCUG00000003337	RBM42	100	96.674	ENSPEMG00000012065	Rbm42	99	96.674	Peromyscus_maniculatus_bairdii
ENSOCUG00000003337	RBM42	100	89.072	ENSPPYG00000009871	RBM42	100	91.546	Pongo_abelii
ENSOCUG00000003337	RBM42	88	95.410	ENSPCAG00000013053	RBM42	84	93.160	Procavia_capensis
ENSOCUG00000003337	RBM42	68	97.727	ENSPCOG00000020672	RBM42	75	97.727	Propithecus_coquereli
ENSOCUG00000003337	RBM42	100	96.507	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSOCUG00000003337	RBM42	100	91.042	ENSPVAG00000012815	RBM42	100	91.042	Pteropus_vampyrus
ENSOCUG00000003337	RBM42	100	96.674	ENSRNOG00000024278	Rbm42	99	96.674	Rattus_norvegicus
ENSOCUG00000003337	RBM42	100	98.226	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSOCUG00000003337	RBM42	100	97.561	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSOCUG00000003337	RBM42	90	91.176	ENSSBOG00000030666	RBM42	100	91.379	Saimiri_boliviensis_boliviensis
ENSOCUG00000003337	RBM42	100	81.250	ENSSARG00000010724	RBM42	100	81.250	Sorex_araneus
ENSOCUG00000003337	RBM42	100	96.896	ENSSSCG00000002905	RBM42	100	96.896	Sus_scrofa
ENSOCUG00000003337	RBM42	100	97.118	ENSUAMG00000020711	RBM42	100	97.118	Ursus_americanus
ENSOCUG00000003337	RBM42	100	95.633	ENSUMAG00000020223	RBM42	100	95.633	Ursus_maritimus
ENSOCUG00000003337	RBM42	100	97.339	ENSVVUG00000015117	RBM42	100	97.339	Vulpes_vulpes