EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000003532 (Gene tree)
Gene ID: 100341967
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 77441 bases
Position: chr17:81370376-81447816
Accession: 100341967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003059	LSM	PF01423.22	5.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000003529	-	1326	XM_008269768	ENSOCUP00000003059	241 (aa)	XP_008267990	G1SJW7

Gene Model

Click here to download ENSOCUG00000003532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000003532	-	70	96.429	ENSOCUG00000014042	-	89	91.589
ENSOCUG00000003532	-	90	86.574	ENSOCUG00000021456	-	88	86.916
ENSOCUG00000003532	-	88	66.038	ENSOCUG00000026813	-	70	70.732
ENSOCUG00000003532	-	76	89.071	ENSOCUG00000022423	-	86	92.857
ENSOCUG00000003532	-	70	94.048	ENSOCUG00000028215	-	89	89.720

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000003532	-	100	99.585	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSOCUG00000003532	-	99	99.167	ENSAMEG00000007034	SNRPN	98	99.167	Ailuropoda_melanoleuca
ENSOCUG00000003532	-	100	99.585	ENSANAG00000034241	SNRPN	100	99.585	Aotus_nancymaae
ENSOCUG00000003532	-	100	98.340	ENSBTAG00000008251	SNRPN	100	98.340	Bos_taurus
ENSOCUG00000003532	-	95	99.127	ENSCJAG00000042622	-	95	99.127	Callithrix_jacchus
ENSOCUG00000003532	-	100	99.585	ENSCJAG00000003759	-	100	99.585	Callithrix_jacchus
ENSOCUG00000003532	-	100	99.170	ENSCAFG00000010127	SNRPN	100	99.170	Canis_familiaris
ENSOCUG00000003532	-	100	99.170	ENSCAFG00020024075	SNRPN	100	99.170	Canis_lupus_dingo
ENSOCUG00000003532	-	100	98.340	ENSCHIG00000017477	SNRPN	100	98.340	Capra_hircus
ENSOCUG00000003532	-	100	99.585	ENSTSYG00000005248	SNRPN	100	99.585	Carlito_syrichta
ENSOCUG00000003532	-	100	99.585	ENSCAPG00000003047	SNRPN	100	99.585	Cavia_aperea
ENSOCUG00000003532	-	100	99.585	ENSCPOG00000020270	SNRPN	100	99.585	Cavia_porcellus
ENSOCUG00000003532	-	100	99.585	ENSCCAG00000024231	SNRPN	100	99.585	Cebus_capucinus
ENSOCUG00000003532	-	100	99.585	ENSCATG00000032518	SNRPN	100	99.585	Cercocebus_atys
ENSOCUG00000003532	-	100	99.585	ENSCLAG00000011376	SNRPN	100	99.585	Chinchilla_lanigera
ENSOCUG00000003532	-	100	99.585	ENSCSAG00000006406	SNRPN	100	99.585	Chlorocebus_sabaeus
ENSOCUG00000003532	-	98	98.298	ENSCHOG00000001846	SNRPN	88	98.298	Choloepus_hoffmanni
ENSOCUG00000003532	-	100	99.585	ENSCANG00000041156	SNRPN	100	99.585	Colobus_angolensis_palliatus
ENSOCUG00000003532	-	100	99.170	ENSCGRG00001004136	Snrpn	100	99.170	Cricetulus_griseus_chok1gshd
ENSOCUG00000003532	-	100	98.755	ENSCGRG00000001621	Snrpn	100	98.755	Cricetulus_griseus_crigri
ENSOCUG00000003532	-	72	92.486	ENSCVAG00000014193	SNRPN	88	85.648	Cyprinodon_variegatus
ENSOCUG00000003532	-	99	98.750	ENSDNOG00000037060	SNRPN	98	98.750	Dasypus_novemcinctus
ENSOCUG00000003532	-	100	99.170	ENSDORG00000004527	Snrpn	100	99.170	Dipodomys_ordii
ENSOCUG00000003532	-	100	99.170	ENSEASG00005017871	SNRPN	100	99.170	Equus_asinus_asinus
ENSOCUG00000003532	-	100	99.170	ENSECAG00000018148	SNRPN	100	99.170	Equus_caballus
ENSOCUG00000003532	-	99	98.333	ENSEEUG00000007440	-	100	98.333	Erinaceus_europaeus
ENSOCUG00000003532	-	100	99.170	ENSFCAG00000022298	-	100	99.170	Felis_catus
ENSOCUG00000003532	-	76	85.326	ENSFDAG00000010528	-	86	85.326	Fukomys_damarensis
ENSOCUG00000003532	-	100	99.170	ENSFDAG00000016578	-	100	99.170	Fukomys_damarensis
ENSOCUG00000003532	-	73	76.836	ENSGMOG00000018161	SNRPN	93	73.364	Gadus_morhua
ENSOCUG00000003532	-	90	73.148	ENSGGOG00000024469	-	93	74.757	Gorilla_gorilla
ENSOCUG00000003532	-	100	99.585	ENSGGOG00000003988	SNRPN	100	99.585	Gorilla_gorilla
ENSOCUG00000003532	-	100	99.585	ENSHGLG00000011924	SNRPN	100	99.585	Heterocephalus_glaber_female
ENSOCUG00000003532	-	89	90.654	ENSHGLG00000019812	-	89	90.654	Heterocephalus_glaber_female
ENSOCUG00000003532	-	100	84.647	ENSHGLG00000002327	-	88	84.579	Heterocephalus_glaber_female
ENSOCUG00000003532	-	90	76.389	ENSHGLG00000020936	-	88	79.439	Heterocephalus_glaber_female
ENSOCUG00000003532	-	89	90.654	ENSHGLG00100021056	-	89	90.654	Heterocephalus_glaber_male
ENSOCUG00000003532	-	100	99.585	ENSHGLG00100016559	SNRPN	100	99.585	Heterocephalus_glaber_male
ENSOCUG00000003532	-	100	82.158	ENSHGLG00100004881	-	88	83.178	Heterocephalus_glaber_male
ENSOCUG00000003532	-	100	99.585	ENSSTOG00000001339	SNRPN	100	99.585	Ictidomys_tridecemlineatus
ENSOCUG00000003532	-	99	99.167	ENSLAFG00000009458	SNRPN	99	99.167	Loxodonta_africana
ENSOCUG00000003532	-	100	99.585	ENSMFAG00000042235	SNRPN	100	99.585	Macaca_fascicularis
ENSOCUG00000003532	-	100	99.585	ENSMMUG00000023139	SNURF	100	99.585	Macaca_mulatta
ENSOCUG00000003532	-	100	99.585	ENSMNEG00000031291	SNRPN	100	99.585	Macaca_nemestrina
ENSOCUG00000003532	-	100	99.585	ENSMLEG00000038837	SNRPN	100	99.585	Mandrillus_leucophaeus
ENSOCUG00000003532	-	69	89.222	ENSMGAG00000008696	SNRPN	88	84.977	Meleagris_gallopavo
ENSOCUG00000003532	-	100	99.585	ENSMAUG00000000051	Snrpn	100	99.585	Mesocricetus_auratus
ENSOCUG00000003532	-	100	99.585	ENSMICG00000042356	SNRPN	100	99.585	Microcebus_murinus
ENSOCUG00000003532	-	100	99.585	ENSMOCG00000015350	Snrpn	100	99.585	Microtus_ochrogaster
ENSOCUG00000003532	-	70	98.214	ENSMODG00000013926	-	89	93.458	Monodelphis_domestica
ENSOCUG00000003532	-	100	99.585	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.585	Mus_caroli
ENSOCUG00000003532	-	100	99.585	ENSMUSG00000102252	Snrpn	100	99.585	Mus_musculus
ENSOCUG00000003532	-	100	99.585	MGP_PahariEiJ_G0013040	Snrpn	100	99.585	Mus_pahari
ENSOCUG00000003532	-	100	99.585	MGP_SPRETEiJ_G0030918	Snrpn	100	99.585	Mus_spretus
ENSOCUG00000003532	-	92	46.835	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSOCUG00000003532	-	100	99.170	ENSMPUG00000014638	-	100	99.170	Mustela_putorius_furo
ENSOCUG00000003532	-	95	61.572	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSOCUG00000003532	-	99	98.750	ENSMLUG00000023361	-	98	98.750	Myotis_lucifugus
ENSOCUG00000003532	-	85	60.488	ENSMLUG00000025849	-	87	60.697	Myotis_lucifugus
ENSOCUG00000003532	-	100	99.585	ENSNGAG00000000181	Snrpn	100	99.585	Nannospalax_galili
ENSOCUG00000003532	-	100	83.402	ENSNLEG00000001376	SNRPN	99	83.402	Nomascus_leucogenys
ENSOCUG00000003532	-	98	80.426	ENSODEG00000016065	-	87	86.058	Octodon_degus
ENSOCUG00000003532	-	100	94.606	ENSODEG00000019708	-	89	98.598	Octodon_degus
ENSOCUG00000003532	-	100	98.755	ENSODEG00000020110	-	100	98.755	Octodon_degus
ENSOCUG00000003532	-	100	99.170	ENSODEG00000013478	-	100	99.170	Octodon_degus
ENSOCUG00000003532	-	73	92.090	ENSORLG00020007490	SNRPN	88	87.037	Oryzias_latipes_hni
ENSOCUG00000003532	-	73	92.090	ENSORLG00015003332	SNRPN	88	87.037	Oryzias_latipes_hsok
ENSOCUG00000003532	-	73	92.655	ENSOMEG00000002066	SNRPN	88	87.500	Oryzias_melastigma
ENSOCUG00000003532	-	100	99.585	ENSOGAG00000007392	SNRPN	100	99.585	Otolemur_garnettii
ENSOCUG00000003532	-	100	98.340	ENSOARG00000009080	SNRPN	100	98.340	Ovis_aries
ENSOCUG00000003532	-	97	68.936	ENSPPAG00000034049	-	86	71.905	Pan_paniscus
ENSOCUG00000003532	-	100	99.585	ENSPPAG00000027650	SNRPN	100	99.585	Pan_paniscus
ENSOCUG00000003532	-	100	99.170	ENSPPRG00000019878	-	100	99.170	Panthera_pardus
ENSOCUG00000003532	-	92	59.729	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSOCUG00000003532	-	100	98.755	ENSPTIG00000004537	SNRPN	100	98.755	Panthera_tigris_altaica
ENSOCUG00000003532	-	100	99.585	ENSPTRG00000006826	SNRPN	100	99.585	Pan_troglodytes
ENSOCUG00000003532	-	97	69.362	ENSPTRG00000052400	-	86	72.381	Pan_troglodytes
ENSOCUG00000003532	-	100	99.585	ENSPANG00000020142	SNRPN	100	99.585	Papio_anubis
ENSOCUG00000003532	-	100	99.585	ENSPEMG00000012911	-	100	99.585	Peromyscus_maniculatus_bairdii
ENSOCUG00000003532	-	89	85.047	ENSPEMG00000013920	-	88	86.449	Peromyscus_maniculatus_bairdii
ENSOCUG00000003532	-	89	94.884	ENSPEMG00000020979	-	89	95.327	Peromyscus_maniculatus_bairdii
ENSOCUG00000003532	-	76	97.253	ENSPCIG00000004699	-	68	94.366	Phascolarctos_cinereus
ENSOCUG00000003532	-	72	93.642	ENSPMEG00000020674	SNRPN	88	86.111	Poecilia_mexicana
ENSOCUG00000003532	-	100	99.585	ENSPPYG00000006269	SNURF	100	99.585	Pongo_abelii
ENSOCUG00000003532	-	100	99.585	ENSPCOG00000014231	SNRPN	100	99.585	Propithecus_coquereli
ENSOCUG00000003532	-	100	99.585	ENSRNOG00000059764	Snrpn	100	99.585	Rattus_norvegicus
ENSOCUG00000003532	-	100	99.585	ENSRBIG00000041765	SNRPN	100	99.585	Rhinopithecus_bieti
ENSOCUG00000003532	-	100	99.585	ENSRROG00000035157	SNRPN	100	99.585	Rhinopithecus_roxellana
ENSOCUG00000003532	-	100	99.585	ENSSBOG00000000110	-	100	99.585	Saimiri_boliviensis_boliviensis
ENSOCUG00000003532	-	100	98.340	ENSSBOG00000024929	-	100	98.340	Saimiri_boliviensis_boliviensis
ENSOCUG00000003532	-	76	96.721	ENSSHAG00000010257	-	87	93.925	Sarcophilus_harrisii
ENSOCUG00000003532	-	99	77.500	ENSSARG00000000072	SNRPN	100	77.500	Sorex_araneus
ENSOCUG00000003532	-	100	98.755	ENSSSCG00000028124	SNRPN	100	98.755	Sus_scrofa
ENSOCUG00000003532	-	100	98.340	ENSTTRG00000010966	SNRPN	89	98.340	Tursiops_truncatus
ENSOCUG00000003532	-	93	99.107	ENSUAMG00000016284	SNRPN	78	99.107	Ursus_americanus
ENSOCUG00000003532	-	100	99.170	ENSUMAG00000025589	SNRPN	100	99.170	Ursus_maritimus
ENSOCUG00000003532	-	95	99.130	ENSVVUG00000017971	SNRPN	94	99.130	Vulpes_vulpes