EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOCUG00000003728 (Gene tree)
Gene ID
100354833
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Minus strand
Length
40163 bases
Position
chrGL018803:413492-453654
Accession
100354833
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000003230CPSF73-100_CPF11718.83.4e-5511
ENSOCUP00000003230Beta-CaspPF10996.83.6e-3411
ENSOCUP00000003230Lactamase_BPF00753.278.1e-1911
ENSOCUP00000003230RMMBLPF07521.128.3e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000003728CPSF3-2012122-ENSOCUP00000003230684 (aa)XP_002722528G1SKA3
Gene Model
Click here to download ENSOCUG00000003728's gene model file
Pathways
Pathway IDPathway NameSource
ocu03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003728's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000003728CPSF310098.977ENSG00000119203CPSF3100100.000Homo_sapiens
ENSOCUG00000003728CPSF39985.420ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSOCUG00000003728CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSOCUG00000003728CPSF310099.415ENSAMEG00000008493CPSF310099.415Ailuropoda_melanoleuca
ENSOCUG00000003728CPSF39286.349ENSACIG00000023663CPSF39986.349Amphilophus_citrinellus
ENSOCUG00000003728CPSF39282.962ENSACIG00000009846cpsf39982.962Amphilophus_citrinellus
ENSOCUG00000003728CPSF39987.941ENSAOCG00000010077CPSF39887.941Amphiprion_ocellaris
ENSOCUG00000003728CPSF39985.420ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSOCUG00000003728CPSF39987.941ENSAPEG00000021167CPSF39887.941Amphiprion_percula
ENSOCUG00000003728CPSF39985.567ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSOCUG00000003728CPSF39983.235ENSATEG00000014525CPSF39883.235Anabas_testudineus
ENSOCUG00000003728CPSF39985.567ENSATEG00000003959cpsf39885.567Anabas_testudineus
ENSOCUG00000003728CPSF39895.387ENSAPLG00000006941CPSF39895.387Anas_platyrhynchos
ENSOCUG00000003728CPSF39392.598ENSACAG00000001759CPSF39992.598Anolis_carolinensis
ENSOCUG00000003728CPSF310092.398ENSANAG00000031254CPSF310092.398Aotus_nancymaae
ENSOCUG00000003728CPSF39785.865ENSACLG00000014484cpsf39985.865Astatotilapia_calliptera
ENSOCUG00000003728CPSF39286.190ENSACLG00000018846CPSF39986.190Astatotilapia_calliptera
ENSOCUG00000003728CPSF39988.235ENSAMXG00000004786cpsf39888.235Astyanax_mexicanus
ENSOCUG00000003728CPSF310099.415ENSBTAG00000019735CPSF310099.415Bos_taurus
ENSOCUG00000003728CPSF39358.563WBGene00013460cpsf-39258.563Caenorhabditis_elegans
ENSOCUG00000003728CPSF310098.830ENSCJAG00000006276CPSF310098.830Callithrix_jacchus
ENSOCUG00000003728CPSF310099.415ENSCAFG00000003375CPSF39599.415Canis_familiaris
ENSOCUG00000003728CPSF39099.838ENSCAFG00020026799CPSF310099.838Canis_lupus_dingo
ENSOCUG00000003728CPSF310099.415ENSCHIG00000013973CPSF310099.415Capra_hircus
ENSOCUG00000003728CPSF310098.977ENSTSYG00000002967CPSF310098.977Carlito_syrichta
ENSOCUG00000003728CPSF39897.451ENSCAPG00000013851CPSF310097.451Cavia_aperea
ENSOCUG00000003728CPSF310097.515ENSCPOG00000011299CPSF310097.515Cavia_porcellus
ENSOCUG00000003728CPSF310098.830ENSCCAG00000036730CPSF310098.830Cebus_capucinus
ENSOCUG00000003728CPSF310096.350ENSCATG00000014770CPSF39999.828Cercocebus_atys
ENSOCUG00000003728CPSF310097.222ENSCLAG00000002727CPSF310097.222Chinchilla_lanigera
ENSOCUG00000003728CPSF310091.228ENSCSAG00000007125CPSF310091.228Chlorocebus_sabaeus
ENSOCUG00000003728CPSF386100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSOCUG00000003728CPSF39995.748ENSCPBG00000014074CPSF39995.748Chrysemys_picta_bellii
ENSOCUG00000003728CPSF39967.883ENSCING00000007214-9867.883Ciona_intestinalis
ENSOCUG00000003728CPSF310085.819ENSCANG00000034435CPSF310085.819Colobus_angolensis_palliatus
ENSOCUG00000003728CPSF310098.538ENSCGRG00001013134Cpsf310098.538Cricetulus_griseus_chok1gshd
ENSOCUG00000003728CPSF310098.538ENSCGRG00000018319Cpsf310098.538Cricetulus_griseus_crigri
ENSOCUG00000003728CPSF39986.784ENSCSEG00000002021CPSF39986.553Cynoglossus_semilaevis
ENSOCUG00000003728CPSF39988.382ENSCVAG00000015067CPSF39888.382Cyprinodon_variegatus
ENSOCUG00000003728CPSF39989.118ENSDARG00000027649cpsf39889.118Danio_rerio
ENSOCUG00000003728CPSF310097.518ENSDNOG00000008940CPSF39597.518Dasypus_novemcinctus
ENSOCUG00000003728CPSF39598.618ENSDORG00000014263Cpsf310098.618Dipodomys_ordii
ENSOCUG00000003728CPSF39967.452FBgn0261065Cpsf739867.452Drosophila_melanogaster
ENSOCUG00000003728CPSF39585.253ENSETEG00000003893CPSF310085.253Echinops_telfairi
ENSOCUG00000003728CPSF39978.653ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSOCUG00000003728CPSF310099.415ENSEASG00005003970CPSF310099.415Equus_asinus_asinus
ENSOCUG00000003728CPSF310099.415ENSECAG00000019911CPSF310099.415Equus_caballus
ENSOCUG00000003728CPSF310083.626ENSEEUG00000015422CPSF310083.626Erinaceus_europaeus
ENSOCUG00000003728CPSF39988.235ENSELUG00000013775cpsf39888.235Esox_lucius
ENSOCUG00000003728CPSF310099.415ENSFCAG00000007852CPSF310099.415Felis_catus
ENSOCUG00000003728CPSF39595.209ENSFALG00000006572CPSF310095.209Ficedula_albicollis
ENSOCUG00000003728CPSF39996.921ENSFDAG00000006317CPSF39996.921Fukomys_damarensis
ENSOCUG00000003728CPSF39985.125ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSOCUG00000003728CPSF35969.024ENSFHEG00000012186CPSF39969.024Fundulus_heteroclitus
ENSOCUG00000003728CPSF39986.618ENSGMOG00000003157cpsf39886.618Gadus_morhua
ENSOCUG00000003728CPSF39994.860ENSGALG00000016424CPSF39994.860Gallus_gallus
ENSOCUG00000003728CPSF39988.218ENSGAFG00000008016CPSF39888.218Gambusia_affinis
ENSOCUG00000003728CPSF39282.989ENSGAFG00000019449cpsf39982.989Gambusia_affinis
ENSOCUG00000003728CPSF36894.004ENSGAGG00000025583CPSF39394.004Gopherus_agassizii
ENSOCUG00000003728CPSF310096.710ENSGGOG00000001757CPSF310099.055Gorilla_gorilla
ENSOCUG00000003728CPSF39985.756ENSHBUG00000001188cpsf39985.756Haplochromis_burtoni
ENSOCUG00000003728CPSF35981.235ENSHBUG00000014332CPSF39981.235Haplochromis_burtoni
ENSOCUG00000003728CPSF310096.491ENSHGLG00000000666CPSF39996.491Heterocephalus_glaber_female
ENSOCUG00000003728CPSF310096.491ENSHGLG00100007765CPSF39996.491Heterocephalus_glaber_male
ENSOCUG00000003728CPSF39986.176ENSHCOG00000015957CPSF39786.176Hippocampus_comes
ENSOCUG00000003728CPSF39985.044ENSHCOG00000007251cpsf39985.044Hippocampus_comes
ENSOCUG00000003728CPSF39987.059ENSIPUG00000023488cpsf39887.059Ictalurus_punctatus
ENSOCUG00000003728CPSF310098.830ENSSTOG00000004476CPSF310098.830Ictidomys_tridecemlineatus
ENSOCUG00000003728CPSF310097.807ENSJJAG00000023415Cpsf310097.807Jaculus_jaculus
ENSOCUG00000003728CPSF39984.706ENSKMAG00000002806cpsf39884.706Kryptolebias_marmoratus
ENSOCUG00000003728CPSF39987.500ENSKMAG00000007317CPSF39887.500Kryptolebias_marmoratus
ENSOCUG00000003728CPSF35580.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSOCUG00000003728CPSF39979.118ENSLBEG00000020569cpsf39479.118Labrus_bergylta
ENSOCUG00000003728CPSF39589.043ENSLBEG00000013492CPSF39889.043Labrus_bergylta
ENSOCUG00000003728CPSF39983.652ENSLACG00000008308CPSF39883.652Latimeria_chalumnae
ENSOCUG00000003728CPSF39989.280ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSOCUG00000003728CPSF39997.500ENSLAFG00000009467CPSF310097.500Loxodonta_africana
ENSOCUG00000003728CPSF310098.977ENSMFAG00000001339CPSF310098.977Macaca_fascicularis
ENSOCUG00000003728CPSF39598.918ENSMMUG00000018038CPSF310098.918Macaca_mulatta
ENSOCUG00000003728CPSF310086.257ENSMNEG00000039447CPSF310086.257Macaca_nemestrina
ENSOCUG00000003728CPSF310099.123ENSMLEG00000026825CPSF310099.123Mandrillus_leucophaeus
ENSOCUG00000003728CPSF39285.127ENSMAMG00000008835CPSF39985.127Mastacembelus_armatus
ENSOCUG00000003728CPSF39985.862ENSMAMG00000003076cpsf39885.862Mastacembelus_armatus
ENSOCUG00000003728CPSF39985.756ENSMZEG00005014358cpsf39985.756Maylandia_zebra
ENSOCUG00000003728CPSF39988.382ENSMZEG00005006258CPSF39888.382Maylandia_zebra
ENSOCUG00000003728CPSF39894.903ENSMGAG00000013995CPSF310094.903Meleagris_gallopavo
ENSOCUG00000003728CPSF35596.543ENSMAUG00000000166Cpsf310096.543Mesocricetus_auratus
ENSOCUG00000003728CPSF310093.567ENSMICG00000002363CPSF310093.567Microcebus_murinus
ENSOCUG00000003728CPSF310094.152ENSMOCG00000020067Cpsf310094.152Microtus_ochrogaster
ENSOCUG00000003728CPSF39482.481ENSMMOG00000018212CPSF39882.481Mola_mola
ENSOCUG00000003728CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSOCUG00000003728CPSF310096.093ENSMODG00000014703CPSF310096.093Monodelphis_domestica
ENSOCUG00000003728CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSOCUG00000003728CPSF39383.281ENSMALG00000011474CPSF39983.281Monopterus_albus
ENSOCUG00000003728CPSF310098.246MGP_CAROLIEiJ_G0017640Cpsf310098.246Mus_caroli
ENSOCUG00000003728CPSF310098.246ENSMUSG00000054309Cpsf310098.246Mus_musculus
ENSOCUG00000003728CPSF310098.099MGP_PahariEiJ_G0029397Cpsf310098.099Mus_pahari
ENSOCUG00000003728CPSF310098.246MGP_SPRETEiJ_G0018481Cpsf310098.246Mus_spretus
ENSOCUG00000003728CPSF310098.684ENSMPUG00000013213CPSF310098.684Mustela_putorius_furo
ENSOCUG00000003728CPSF310098.686ENSMLUG00000010636CPSF310098.686Myotis_lucifugus
ENSOCUG00000003728CPSF310098.392ENSNGAG00000019836Cpsf310098.392Nannospalax_galili
ENSOCUG00000003728CPSF39985.316ENSNBRG00000004770cpsf39985.316Neolamprologus_brichardi
ENSOCUG00000003728CPSF39286.190ENSNBRG00000010525CPSF39986.190Neolamprologus_brichardi
ENSOCUG00000003728CPSF310098.977ENSNLEG00000013359CPSF310098.977Nomascus_leucogenys
ENSOCUG00000003728CPSF310065.643ENSMEUG00000013117-10065.643Notamacropus_eugenii
ENSOCUG00000003728CPSF310089.912ENSOPRG00000008902CPSF310089.912Ochotona_princeps
ENSOCUG00000003728CPSF310096.784ENSODEG00000003129CPSF310096.784Octodon_degus
ENSOCUG00000003728CPSF39985.903ENSONIG00000018812cpsf39985.903Oreochromis_niloticus
ENSOCUG00000003728CPSF38296.099ENSOANG00000008577CPSF310096.099Ornithorhynchus_anatinus
ENSOCUG00000003728CPSF39983.700ENSORLG00000018854cpsf39983.700Oryzias_latipes
ENSOCUG00000003728CPSF39983.554ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSOCUG00000003728CPSF39983.700ENSORLG00015011017cpsf39983.700Oryzias_latipes_hsok
ENSOCUG00000003728CPSF39983.847ENSOMEG00000010647cpsf39483.847Oryzias_melastigma
ENSOCUG00000003728CPSF310089.181ENSOGAG00000001680CPSF310089.181Otolemur_garnettii
ENSOCUG00000003728CPSF310099.415ENSOARG00000015073CPSF310099.415Ovis_aries
ENSOCUG00000003728CPSF310099.123ENSPPAG00000042457CPSF310099.123Pan_paniscus
ENSOCUG00000003728CPSF310099.123ENSPPRG00000016790CPSF310099.123Panthera_pardus
ENSOCUG00000003728CPSF39999.118ENSPTIG00000003920CPSF310099.055Panthera_tigris_altaica
ENSOCUG00000003728CPSF310099.123ENSPTRG00000011638CPSF310099.123Pan_troglodytes
ENSOCUG00000003728CPSF310098.830ENSPANG00000016798CPSF310098.830Papio_anubis
ENSOCUG00000003728CPSF39989.412ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSOCUG00000003728CPSF39993.997ENSPSIG00000016144CPSF310093.997Pelodiscus_sinensis
ENSOCUG00000003728CPSF38385.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSOCUG00000003728CPSF35979.506ENSPMGG00000015311CPSF39979.506Periophthalmus_magnuspinnatus
ENSOCUG00000003728CPSF310097.953ENSPEMG00000017668Cpsf310097.953Peromyscus_maniculatus_bairdii
ENSOCUG00000003728CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSOCUG00000003728CPSF39897.601ENSPCIG00000009823CPSF39897.699Phascolarctos_cinereus
ENSOCUG00000003728CPSF39984.897ENSPFOG00000015922cpsf39984.897Poecilia_formosa
ENSOCUG00000003728CPSF39987.923ENSPFOG00000010418-9887.923Poecilia_formosa
ENSOCUG00000003728CPSF35980.941ENSPLAG00000021300-9980.941Poecilia_latipinna
ENSOCUG00000003728CPSF39984.897ENSPLAG00000000882cpsf39984.897Poecilia_latipinna
ENSOCUG00000003728CPSF39985.044ENSPMEG00000018309cpsf39985.044Poecilia_mexicana
ENSOCUG00000003728CPSF39983.063ENSPREG00000004482CPSF39883.063Poecilia_reticulata
ENSOCUG00000003728CPSF39282.830ENSPREG00000014875cpsf39982.830Poecilia_reticulata
ENSOCUG00000003728CPSF310094.591ENSPPYG00000012666CPSF310094.591Pongo_abelii
ENSOCUG00000003728CPSF39564.055ENSPCAG00000015042CPSF310064.055Procavia_capensis
ENSOCUG00000003728CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSOCUG00000003728CPSF39999.120ENSPVAG00000005324CPSF39999.120Pteropus_vampyrus
ENSOCUG00000003728CPSF37991.344ENSPNYG00000021047CPSF39191.344Pundamilia_nyererei
ENSOCUG00000003728CPSF39985.756ENSPNYG00000004405cpsf39985.756Pundamilia_nyererei
ENSOCUG00000003728CPSF39987.500ENSPNAG00000023060cpsf39887.500Pygocentrus_nattereri
ENSOCUG00000003728CPSF39998.240ENSRNOG00000052418Cpsf39998.240Rattus_norvegicus
ENSOCUG00000003728CPSF310093.129ENSRBIG00000041615CPSF39994.436Rhinopithecus_bieti
ENSOCUG00000003728CPSF310099.123ENSRROG00000033792CPSF310099.123Rhinopithecus_roxellana
ENSOCUG00000003728CPSF38443.683YLR277CYSH18443.683Saccharomyces_cerevisiae
ENSOCUG00000003728CPSF310092.754ENSSBOG00000027263CPSF310092.754Saimiri_boliviensis_boliviensis
ENSOCUG00000003728CPSF310097.807ENSSHAG00000007024CPSF310097.807Sarcophilus_harrisii
ENSOCUG00000003728CPSF39989.427ENSSFOG00015002108cpsf39989.427Scleropages_formosus
ENSOCUG00000003728CPSF39587.809ENSSMAG00000020534CPSF39587.809Scophthalmus_maximus
ENSOCUG00000003728CPSF39988.088ENSSDUG00000018498CPSF39888.088Seriola_dumerili
ENSOCUG00000003728CPSF39985.903ENSSDUG00000002828cpsf39685.903Seriola_dumerili
ENSOCUG00000003728CPSF39985.903ENSSLDG00000008469cpsf39685.903Seriola_lalandi_dorsalis
ENSOCUG00000003728CPSF39988.088ENSSLDG00000005234CPSF39888.088Seriola_lalandi_dorsalis
ENSOCUG00000003728CPSF310081.579ENSSARG00000005186CPSF310081.579Sorex_araneus
ENSOCUG00000003728CPSF39892.399ENSSPUG00000015525CPSF39792.399Sphenodon_punctatus
ENSOCUG00000003728CPSF39987.794ENSSPAG00000002906CPSF39887.794Stegastes_partitus
ENSOCUG00000003728CPSF39985.567ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSOCUG00000003728CPSF39999.268ENSSSCG00000020799CPSF39999.268Sus_scrofa
ENSOCUG00000003728CPSF39995.301ENSTGUG00000013016CPSF39995.301Taeniopygia_guttata
ENSOCUG00000003728CPSF39985.147ENSTRUG00000007030cpsf39785.147Takifugu_rubripes
ENSOCUG00000003728CPSF35972.973ENSTRUG00000013905CPSF39972.973Takifugu_rubripes
ENSOCUG00000003728CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSOCUG00000003728CPSF38897.849ENSTTRG00000000861CPSF38897.849Tursiops_truncatus
ENSOCUG00000003728CPSF39996.334ENSUAMG00000007535CPSF39896.334Ursus_americanus
ENSOCUG00000003728CPSF39599.382ENSUMAG00000003676CPSF310099.382Ursus_maritimus
ENSOCUG00000003728CPSF39395.584ENSVPAG00000008041CPSF310095.584Vicugna_pacos
ENSOCUG00000003728CPSF310099.415ENSVVUG00000002194CPSF310099.415Vulpes_vulpes
ENSOCUG00000003728CPSF39989.868ENSXETG00000008263cpsf39889.868Xenopus_tropicalis
ENSOCUG00000003728CPSF35479.515ENSXCOG00000000957-8779.515Xiphophorus_couchianus
ENSOCUG00000003728CPSF39985.191ENSXCOG00000019695cpsf39985.191Xiphophorus_couchianus
ENSOCUG00000003728CPSF39988.071ENSXMAG00000027291CPSF39888.071Xiphophorus_maculatus
ENSOCUG00000003728CPSF39984.897ENSXMAG00000009784cpsf39984.897Xiphophorus_maculatus

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