EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000003901 (Gene tree)
Gene ID: 100358023
Gene Symbol: GAR1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 7429 bases
Position: chr15:39602283-39609711
Accession: 100358023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003384	Gar1	PF04410.14	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000003899	GAR1-201	980	XM_002717187	ENSOCUP00000003384	215 (aa)	XP_002717233	G1SKN7

Gene Model

Click here to download ENSOCUG00000003901's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000003901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000003901	GAR1	51	99.083	ENSG00000109534	GAR1	50	99.083	Homo_sapiens
ENSOCUG00000003901	GAR1	67	86.207	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSOCUG00000003901	GAR1	51	97.248	ENSAMEG00000004605	GAR1	53	97.248	Ailuropoda_melanoleuca
ENSOCUG00000003901	GAR1	50	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSOCUG00000003901	GAR1	50	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSOCUG00000003901	GAR1	50	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSOCUG00000003901	GAR1	51	99.083	ENSANAG00000021608	GAR1	50	99.083	Aotus_nancymaae
ENSOCUG00000003901	GAR1	51	87.273	ENSAMXG00000015752	gar1	59	84.444	Astyanax_mexicanus
ENSOCUG00000003901	GAR1	51	98.165	ENSBTAG00000000748	GAR1	52	98.165	Bos_taurus
ENSOCUG00000003901	GAR1	65	53.571	WBGene00022046	Y66H1A.4	64	49.367	Caenorhabditis_elegans
ENSOCUG00000003901	GAR1	51	99.083	ENSCJAG00000004041	GAR1	50	99.083	Callithrix_jacchus
ENSOCUG00000003901	GAR1	51	98.182	ENSCHIG00000016026	-	52	98.165	Capra_hircus
ENSOCUG00000003901	GAR1	100	95.370	ENSTSYG00000013668	-	51	99.083	Carlito_syrichta
ENSOCUG00000003901	GAR1	51	90.826	ENSTSYG00000026632	-	56	90.826	Carlito_syrichta
ENSOCUG00000003901	GAR1	51	98.182	ENSCPOG00000004216	GAR1	50	98.165	Cavia_porcellus
ENSOCUG00000003901	GAR1	51	99.083	ENSCCAG00000029372	GAR1	50	99.083	Cebus_capucinus
ENSOCUG00000003901	GAR1	51	99.091	ENSCATG00000021854	GAR1	55	99.083	Cercocebus_atys
ENSOCUG00000003901	GAR1	51	97.273	ENSCLAG00000005335	GAR1	69	98.182	Chinchilla_lanigera
ENSOCUG00000003901	GAR1	50	99.065	ENSCSAG00000003922	GAR1	55	99.083	Chlorocebus_sabaeus
ENSOCUG00000003901	GAR1	54	98.276	ENSCHOG00000007484	-	51	98.276	Choloepus_hoffmanni
ENSOCUG00000003901	GAR1	79	88.333	ENSCPBG00000004310	GAR1	55	91.743	Chrysemys_picta_bellii
ENSOCUG00000003901	GAR1	51	98.182	ENSCANG00000039262	GAR1	50	98.165	Colobus_angolensis_palliatus
ENSOCUG00000003901	GAR1	50	94.393	ENSCVAG00000002103	gar1	51	94.393	Cyprinodon_variegatus
ENSOCUG00000003901	GAR1	50	91.589	ENSDARG00000076526	gar1	67	77.333	Danio_rerio
ENSOCUG00000003901	GAR1	87	95.789	ENSDNOG00000037632	GAR1	96	95.789	Dasypus_novemcinctus
ENSOCUG00000003901	GAR1	52	95.495	ENSDORG00000000482	Gar1	50	95.413	Dipodomys_ordii
ENSOCUG00000003901	GAR1	51	97.273	ENSEASG00005004658	GAR1	50	97.248	Equus_asinus_asinus
ENSOCUG00000003901	GAR1	51	98.182	ENSECAG00000013624	GAR1	55	98.165	Equus_caballus
ENSOCUG00000003901	GAR1	62	58.209	ENSFCAG00000025841	-	57	63.025	Felis_catus
ENSOCUG00000003901	GAR1	51	98.165	ENSFCAG00000040791	-	52	98.165	Felis_catus
ENSOCUG00000003901	GAR1	52	91.892	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSOCUG00000003901	GAR1	56	87.500	ENSGAGG00000004393	GAR1	55	92.523	Gopherus_agassizii
ENSOCUG00000003901	GAR1	52	79.279	ENSGGOG00000036205	-	54	79.817	Gorilla_gorilla
ENSOCUG00000003901	GAR1	51	98.165	ENSGGOG00000008681	GAR1	50	98.165	Gorilla_gorilla
ENSOCUG00000003901	GAR1	67	92.414	ENSHBUG00000023860	gar1	72	92.414	Haplochromis_burtoni
ENSOCUG00000003901	GAR1	100	92.558	ENSHGLG00000000493	GAR1	72	100.000	Heterocephalus_glaber_female
ENSOCUG00000003901	GAR1	51	90.000	ENSIPUG00000003194	gar1	51	91.589	Ictalurus_punctatus
ENSOCUG00000003901	GAR1	100	94.954	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSOCUG00000003901	GAR1	52	89.189	ENSKMAG00000010402	gar1	51	91.589	Kryptolebias_marmoratus
ENSOCUG00000003901	GAR1	79	83.471	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSOCUG00000003901	GAR1	50	83.333	ENSMFAG00000003572	-	53	82.569	Macaca_fascicularis
ENSOCUG00000003901	GAR1	51	99.091	ENSMFAG00000024592	GAR1	50	99.083	Macaca_fascicularis
ENSOCUG00000003901	GAR1	51	99.091	ENSMMUG00000021225	GAR1	50	99.083	Macaca_mulatta
ENSOCUG00000003901	GAR1	51	99.091	ENSMNEG00000042594	GAR1	50	99.083	Macaca_nemestrina
ENSOCUG00000003901	GAR1	51	99.091	ENSMLEG00000002496	GAR1	50	99.083	Mandrillus_leucophaeus
ENSOCUG00000003901	GAR1	51	95.413	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSOCUG00000003901	GAR1	52	97.321	ENSMICG00000003326	GAR1	50	98.165	Microcebus_murinus
ENSOCUG00000003901	GAR1	51	94.495	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSOCUG00000003901	GAR1	50	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSOCUG00000003901	GAR1	50	93.458	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSOCUG00000003901	GAR1	51	95.413	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSOCUG00000003901	GAR1	51	95.455	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSOCUG00000003901	GAR1	51	97.273	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSOCUG00000003901	GAR1	51	95.455	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSOCUG00000003901	GAR1	100	93.548	ENSMPUG00000008615	GAR1	52	98.165	Mustela_putorius_furo
ENSOCUG00000003901	GAR1	51	97.273	ENSNGAG00000008268	Gar1	71	98.182	Nannospalax_galili
ENSOCUG00000003901	GAR1	52	82.883	ENSNLEG00000034282	-	55	82.569	Nomascus_leucogenys
ENSOCUG00000003901	GAR1	51	99.091	ENSNLEG00000016578	GAR1	50	99.083	Nomascus_leucogenys
ENSOCUG00000003901	GAR1	50	97.196	ENSODEG00000011083	GAR1	56	96.330	Octodon_degus
ENSOCUG00000003901	GAR1	70	82.000	ENSORLG00000020583	gar1	62	88.971	Oryzias_latipes
ENSOCUG00000003901	GAR1	70	82.000	ENSORLG00020008602	gar1	62	88.971	Oryzias_latipes_hni
ENSOCUG00000003901	GAR1	70	82.000	ENSORLG00015017643	gar1	62	88.971	Oryzias_latipes_hsok
ENSOCUG00000003901	GAR1	70	82.000	ENSOMEG00000007911	GAR1	50	88.971	Oryzias_melastigma
ENSOCUG00000003901	GAR1	100	96.296	ENSOGAG00000004693	GAR1	100	96.296	Otolemur_garnettii
ENSOCUG00000003901	GAR1	51	98.165	ENSOARG00000004910	GAR1	52	98.165	Ovis_aries
ENSOCUG00000003901	GAR1	51	99.083	ENSPPAG00000014081	GAR1	55	99.083	Pan_paniscus
ENSOCUG00000003901	GAR1	100	93.548	ENSPPRG00000023697	GAR1	52	98.165	Panthera_pardus
ENSOCUG00000003901	GAR1	100	93.548	ENSPTIG00000021565	GAR1	52	98.165	Panthera_tigris_altaica
ENSOCUG00000003901	GAR1	77	64.242	ENSPTRG00000049340	-	70	74.658	Pan_troglodytes
ENSOCUG00000003901	GAR1	51	99.091	ENSPTRG00000016364	GAR1	55	99.083	Pan_troglodytes
ENSOCUG00000003901	GAR1	51	99.091	ENSPANG00000000639	GAR1	50	99.083	Papio_anubis
ENSOCUG00000003901	GAR1	76	76.829	ENSPKIG00000018991	gar1	65	85.417	Paramormyrops_kingsleyae
ENSOCUG00000003901	GAR1	51	95.413	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSOCUG00000003901	GAR1	50	92.593	ENSPCIG00000018912	GAR1	57	85.294	Phascolarctos_cinereus
ENSOCUG00000003901	GAR1	50	93.458	ENSPFOG00000024155	gar1	51	93.458	Poecilia_formosa
ENSOCUG00000003901	GAR1	50	93.458	ENSPLAG00000015056	gar1	51	93.458	Poecilia_latipinna
ENSOCUG00000003901	GAR1	50	94.393	ENSPMEG00000009320	gar1	51	94.393	Poecilia_mexicana
ENSOCUG00000003901	GAR1	51	99.083	ENSPPYG00000014996	GAR1	50	99.083	Pongo_abelii
ENSOCUG00000003901	GAR1	50	99.065	ENSPCOG00000027049	GAR1	56	99.083	Propithecus_coquereli
ENSOCUG00000003901	GAR1	51	96.364	ENSRNOG00000061146	Gar1	63	97.196	Rattus_norvegicus
ENSOCUG00000003901	GAR1	100	95.000	ENSRBIG00000019547	GAR1	100	95.000	Rhinopithecus_bieti
ENSOCUG00000003901	GAR1	52	81.250	ENSRBIG00000042411	-	53	80.734	Rhinopithecus_bieti
ENSOCUG00000003901	GAR1	51	99.091	ENSRROG00000028454	GAR1	55	99.083	Rhinopithecus_roxellana
ENSOCUG00000003901	GAR1	52	81.250	ENSRROG00000044348	-	52	80.734	Rhinopithecus_roxellana
ENSOCUG00000003901	GAR1	51	99.083	ENSSBOG00000024785	GAR1	50	99.083	Saimiri_boliviensis_boliviensis
ENSOCUG00000003901	GAR1	50	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSOCUG00000003901	GAR1	50	94.393	ENSSPAG00000005974	gar1	53	92.562	Stegastes_partitus
ENSOCUG00000003901	GAR1	51	98.182	ENSSSCG00000009137	GAR1	54	98.165	Sus_scrofa
ENSOCUG00000003901	GAR1	50	90.654	ENSTRUG00000020580	gar1	51	90.654	Takifugu_rubripes
ENSOCUG00000003901	GAR1	51	98.165	ENSUMAG00000000776	GAR1	53	98.165	Ursus_maritimus
ENSOCUG00000003901	GAR1	51	98.165	ENSVVUG00000017612	GAR1	56	98.165	Vulpes_vulpes