EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000004016 (Gene tree)
Gene ID: 100343986
Gene Symbol: RNPC3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 40752 bases
Position: chr13:60607635-60648386
Accession: 100343986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003479	RRM_1	PF00076.22	4.2e-18	1	2
ENSOCUP00000003479	RRM_1	PF00076.22	4.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004013	RNPC3-201	2347	XM_002715826	ENSOCUP00000003479	516 (aa)	XP_002715872	G1SKW8

Gene Model

Click here to download ENSOCUG00000004016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004016	RNPC3	100	91.876	ENSG00000185946	RNPC3	100	92.432	Homo_sapiens
ENSOCUG00000004016	RNPC3	95	56.452	ENSAPOG00000017371	rnpc3	97	56.740	Acanthochromis_polyacanthus
ENSOCUG00000004016	RNPC3	98	91.552	ENSAMEG00000001694	RNPC3	100	90.577	Ailuropoda_melanoleuca
ENSOCUG00000004016	RNPC3	95	53.069	ENSACIG00000021043	rnpc3	97	52.549	Amphilophus_citrinellus
ENSOCUG00000004016	RNPC3	95	55.689	ENSAOCG00000014052	rnpc3	95	55.976	Amphiprion_ocellaris
ENSOCUG00000004016	RNPC3	95	55.489	ENSAPEG00000008739	rnpc3	95	55.777	Amphiprion_percula
ENSOCUG00000004016	RNPC3	95	55.289	ENSATEG00000021263	rnpc3	97	55.336	Anabas_testudineus
ENSOCUG00000004016	RNPC3	88	69.584	ENSAPLG00000015605	RNPC3	99	69.824	Anas_platyrhynchos
ENSOCUG00000004016	RNPC3	95	67.073	ENSACAG00000002029	RNPC3	99	66.473	Anolis_carolinensis
ENSOCUG00000004016	RNPC3	100	91.489	ENSANAG00000019950	RNPC3	100	91.489	Aotus_nancymaae
ENSOCUG00000004016	RNPC3	95	53.939	ENSACLG00000014702	rnpc3	96	54.234	Astatotilapia_calliptera
ENSOCUG00000004016	RNPC3	95	57.347	ENSAMXG00000033372	rnpc3	96	54.949	Astyanax_mexicanus
ENSOCUG00000004016	RNPC3	100	91.683	ENSBTAG00000019091	RNPC3	100	91.683	Bos_taurus
ENSOCUG00000004016	RNPC3	100	87.427	ENSCJAG00000035686	RNPC3	100	88.008	Callithrix_jacchus
ENSOCUG00000004016	RNPC3	100	91.120	ENSCAFG00000019972	RNPC3	100	91.120	Canis_familiaris
ENSOCUG00000004016	RNPC3	100	91.313	ENSCAFG00020011300	RNPC3	100	91.313	Canis_lupus_dingo
ENSOCUG00000004016	RNPC3	100	92.070	ENSCHIG00000020361	RNPC3	100	92.070	Capra_hircus
ENSOCUG00000004016	RNPC3	100	89.942	ENSTSYG00000030256	RNPC3	100	89.942	Carlito_syrichta
ENSOCUG00000004016	RNPC3	84	78.815	ENSCAPG00000013600	RNPC3	97	79.582	Cavia_aperea
ENSOCUG00000004016	RNPC3	100	89.942	ENSCPOG00000031638	RNPC3	100	89.942	Cavia_porcellus
ENSOCUG00000004016	RNPC3	100	91.683	ENSCCAG00000024301	RNPC3	100	91.683	Cebus_capucinus
ENSOCUG00000004016	RNPC3	99	91.456	ENSCATG00000002086	RNPC3	99	91.456	Cercocebus_atys
ENSOCUG00000004016	RNPC3	98	68.898	ENSCATG00000035930	-	99	67.520	Cercocebus_atys
ENSOCUG00000004016	RNPC3	100	86.460	ENSCLAG00000005169	RNPC3	100	88.395	Chinchilla_lanigera
ENSOCUG00000004016	RNPC3	99	91.262	ENSCSAG00000001519	RNPC3	99	91.262	Chlorocebus_sabaeus
ENSOCUG00000004016	RNPC3	96	70.020	ENSCPBG00000028311	RNPC3	95	70.423	Chrysemys_picta_bellii
ENSOCUG00000004016	RNPC3	95	38.310	ENSCING00000021276	-	100	38.114	Ciona_intestinalis
ENSOCUG00000004016	RNPC3	93	37.344	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSOCUG00000004016	RNPC3	99	91.262	ENSCANG00000031444	RNPC3	99	91.262	Colobus_angolensis_palliatus
ENSOCUG00000004016	RNPC3	99	89.147	ENSCGRG00001019276	Rnpc3	100	89.147	Cricetulus_griseus_chok1gshd
ENSOCUG00000004016	RNPC3	88	89.823	ENSCGRG00000000053	Rnpc3	100	89.823	Cricetulus_griseus_crigri
ENSOCUG00000004016	RNPC3	94	54.637	ENSCSEG00000013475	rnpc3	96	54.728	Cynoglossus_semilaevis
ENSOCUG00000004016	RNPC3	95	53.516	ENSCVAG00000002645	rnpc3	97	54.528	Cyprinodon_variegatus
ENSOCUG00000004016	RNPC3	95	56.338	ENSDARG00000011247	rnpc3	93	65.896	Danio_rerio
ENSOCUG00000004016	RNPC3	100	89.555	ENSDNOG00000047498	-	100	89.555	Dasypus_novemcinctus
ENSOCUG00000004016	RNPC3	100	89.942	ENSDNOG00000044555	-	100	89.942	Dasypus_novemcinctus
ENSOCUG00000004016	RNPC3	99	89.147	ENSDORG00000027343	Rnpc3	99	88.760	Dipodomys_ordii
ENSOCUG00000004016	RNPC3	95	48.054	ENSEBUG00000002068	rnpc3	97	48.323	Eptatretus_burgeri
ENSOCUG00000004016	RNPC3	100	91.506	ENSEASG00005015957	RNPC3	100	91.506	Equus_asinus_asinus
ENSOCUG00000004016	RNPC3	100	92.085	ENSECAG00000021148	RNPC3	100	92.085	Equus_caballus
ENSOCUG00000004016	RNPC3	95	52.918	ENSELUG00000002264	rnpc3	97	51.751	Esox_lucius
ENSOCUG00000004016	RNPC3	100	90.927	ENSFCAG00000024312	RNPC3	100	90.927	Felis_catus
ENSOCUG00000004016	RNPC3	88	71.366	ENSFALG00000002580	RNPC3	99	73.206	Ficedula_albicollis
ENSOCUG00000004016	RNPC3	99	90.698	ENSFDAG00000019948	RNPC3	100	90.698	Fukomys_damarensis
ENSOCUG00000004016	RNPC3	96	51.703	ENSFHEG00000020647	rnpc3	98	51.394	Fundulus_heteroclitus
ENSOCUG00000004016	RNPC3	95	54.527	ENSGMOG00000019213	rnpc3	95	53.939	Gadus_morhua
ENSOCUG00000004016	RNPC3	96	71.515	ENSGALG00000005162	RNPC3	89	70.707	Gallus_gallus
ENSOCUG00000004016	RNPC3	95	53.600	ENSGAFG00000017236	rnpc3	96	53.707	Gambusia_affinis
ENSOCUG00000004016	RNPC3	95	54.694	ENSGACG00000002048	rnpc3	96	54.207	Gasterosteus_aculeatus
ENSOCUG00000004016	RNPC3	96	70.020	ENSGAGG00000008438	RNPC3	99	68.260	Gopherus_agassizii
ENSOCUG00000004016	RNPC3	99	74.023	ENSGGOG00000026201	-	98	74.067	Gorilla_gorilla
ENSOCUG00000004016	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSOCUG00000004016	RNPC3	100	91.103	ENSHGLG00000001708	RNPC3	100	91.103	Heterocephalus_glaber_female
ENSOCUG00000004016	RNPC3	100	91.103	ENSHGLG00100003005	RNPC3	100	91.103	Heterocephalus_glaber_male
ENSOCUG00000004016	RNPC3	96	54.274	ENSHCOG00000017135	rnpc3	97	54.691	Hippocampus_comes
ENSOCUG00000004016	RNPC3	95	57.086	ENSIPUG00000002916	rnpc3	97	55.512	Ictalurus_punctatus
ENSOCUG00000004016	RNPC3	100	90.909	ENSSTOG00000025020	RNPC3	100	90.909	Ictidomys_tridecemlineatus
ENSOCUG00000004016	RNPC3	99	87.573	ENSJJAG00000010203	Rnpc3	100	88.350	Jaculus_jaculus
ENSOCUG00000004016	RNPC3	95	54.343	ENSKMAG00000017358	rnpc3	97	54.949	Kryptolebias_marmoratus
ENSOCUG00000004016	RNPC3	95	55.489	ENSLBEG00000024901	rnpc3	95	55.777	Labrus_bergylta
ENSOCUG00000004016	RNPC3	95	61.446	ENSLACG00000005720	RNPC3	90	61.895	Latimeria_chalumnae
ENSOCUG00000004016	RNPC3	95	59.878	ENSLOCG00000007986	rnpc3	96	60.202	Lepisosteus_oculatus
ENSOCUG00000004016	RNPC3	99	87.984	ENSLAFG00000032342	RNPC3	100	88.566	Loxodonta_africana
ENSOCUG00000004016	RNPC3	99	66.473	ENSMFAG00000002917	-	99	66.279	Macaca_fascicularis
ENSOCUG00000004016	RNPC3	99	91.262	ENSMFAG00000002004	RNPC3	99	91.262	Macaca_fascicularis
ENSOCUG00000004016	RNPC3	99	91.262	ENSMMUG00000018039	RNPC3	99	91.262	Macaca_mulatta
ENSOCUG00000004016	RNPC3	82	84.651	ENSMMUG00000002098	-	92	83.721	Macaca_mulatta
ENSOCUG00000004016	RNPC3	99	86.602	ENSMNEG00000033950	RNPC3	99	86.602	Macaca_nemestrina
ENSOCUG00000004016	RNPC3	98	62.157	ENSMNEG00000029209	-	99	64.510	Macaca_nemestrina
ENSOCUG00000004016	RNPC3	99	91.456	ENSMLEG00000033628	RNPC3	99	91.456	Mandrillus_leucophaeus
ENSOCUG00000004016	RNPC3	98	68.750	ENSMLEG00000034644	-	98	67.184	Mandrillus_leucophaeus
ENSOCUG00000004016	RNPC3	95	51.485	ENSMAMG00000007496	rnpc3	97	50.194	Mastacembelus_armatus
ENSOCUG00000004016	RNPC3	95	53.452	ENSMZEG00005020233	rnpc3	97	53.740	Maylandia_zebra
ENSOCUG00000004016	RNPC3	88	70.989	ENSMGAG00000006381	RNPC3	99	70.989	Meleagris_gallopavo
ENSOCUG00000004016	RNPC3	97	90.381	ENSMAUG00000001358	Rnpc3	100	89.147	Mesocricetus_auratus
ENSOCUG00000004016	RNPC3	99	92.248	ENSMICG00000029591	RNPC3	99	92.248	Microcebus_murinus
ENSOCUG00000004016	RNPC3	97	90.000	ENSMOCG00000013423	Rnpc3	100	88.417	Microtus_ochrogaster
ENSOCUG00000004016	RNPC3	95	51.613	ENSMMOG00000005309	rnpc3	97	52.419	Mola_mola
ENSOCUG00000004016	RNPC3	99	77.326	ENSMODG00000002946	RNPC3	99	76.938	Monodelphis_domestica
ENSOCUG00000004016	RNPC3	95	52.906	ENSMALG00000015471	rnpc3	97	53.785	Monopterus_albus
ENSOCUG00000004016	RNPC3	99	87.403	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.403	Mus_caroli
ENSOCUG00000004016	RNPC3	99	87.597	ENSMUSG00000027981	Rnpc3	100	87.597	Mus_musculus
ENSOCUG00000004016	RNPC3	99	87.791	MGP_PahariEiJ_G0027001	Rnpc3	100	87.791	Mus_pahari
ENSOCUG00000004016	RNPC3	99	87.016	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.016	Mus_spretus
ENSOCUG00000004016	RNPC3	100	90.734	ENSMPUG00000007349	RNPC3	100	90.734	Mustela_putorius_furo
ENSOCUG00000004016	RNPC3	100	88.588	ENSMLUG00000028743	RNPC3	100	88.588	Myotis_lucifugus
ENSOCUG00000004016	RNPC3	99	88.911	ENSNGAG00000010939	Rnpc3	100	88.953	Nannospalax_galili
ENSOCUG00000004016	RNPC3	95	53.737	ENSNBRG00000012196	rnpc3	97	52.611	Neolamprologus_brichardi
ENSOCUG00000004016	RNPC3	100	91.683	ENSNLEG00000012013	RNPC3	100	91.683	Nomascus_leucogenys
ENSOCUG00000004016	RNPC3	100	87.234	ENSODEG00000007612	RNPC3	100	87.234	Octodon_degus
ENSOCUG00000004016	RNPC3	95	55.354	ENSONIG00000004770	rnpc3	99	55.556	Oreochromis_niloticus
ENSOCUG00000004016	RNPC3	90	78.541	ENSOANG00000008220	RNPC3	99	78.970	Ornithorhynchus_anatinus
ENSOCUG00000004016	RNPC3	95	53.320	ENSORLG00000005694	rnpc3	97	54.016	Oryzias_latipes
ENSOCUG00000004016	RNPC3	95	53.908	ENSORLG00020005513	rnpc3	97	54.108	Oryzias_latipes_hni
ENSOCUG00000004016	RNPC3	95	53.213	ENSORLG00015002179	rnpc3	97	53.908	Oryzias_latipes_hsok
ENSOCUG00000004016	RNPC3	95	53.722	ENSOMEG00000017737	rnpc3	97	54.618	Oryzias_melastigma
ENSOCUG00000004016	RNPC3	100	91.683	ENSOGAG00000026182	RNPC3	100	91.683	Otolemur_garnettii
ENSOCUG00000004016	RNPC3	100	91.876	ENSOARG00000018719	RNPC3	100	91.876	Ovis_aries
ENSOCUG00000004016	RNPC3	100	74.468	ENSPPAG00000030278	-	100	74.662	Pan_paniscus
ENSOCUG00000004016	RNPC3	100	91.506	ENSPPAG00000037459	RNPC3	100	91.506	Pan_paniscus
ENSOCUG00000004016	RNPC3	100	90.927	ENSPPRG00000020246	RNPC3	100	90.927	Panthera_pardus
ENSOCUG00000004016	RNPC3	98	91.142	ENSPTIG00000009887	RNPC3	100	91.142	Panthera_tigris_altaica
ENSOCUG00000004016	RNPC3	100	74.275	ENSPTRG00000044227	-	100	74.275	Pan_troglodytes
ENSOCUG00000004016	RNPC3	100	91.683	ENSPTRG00000033902	RNPC3	100	91.683	Pan_troglodytes
ENSOCUG00000004016	RNPC3	98	72.102	ENSPANG00000029957	-	100	70.334	Papio_anubis
ENSOCUG00000004016	RNPC3	99	91.456	ENSPANG00000012137	RNPC3	99	91.456	Papio_anubis
ENSOCUG00000004016	RNPC3	96	52.055	ENSPKIG00000008828	rnpc3	95	53.252	Paramormyrops_kingsleyae
ENSOCUG00000004016	RNPC3	63	69.486	ENSPSIG00000007396	RNPC3	99	69.184	Pelodiscus_sinensis
ENSOCUG00000004016	RNPC3	93	51.324	ENSPMGG00000011742	rnpc3	95	52.041	Periophthalmus_magnuspinnatus
ENSOCUG00000004016	RNPC3	89	88.840	ENSPEMG00000020112	Rnpc3	100	89.602	Peromyscus_maniculatus_bairdii
ENSOCUG00000004016	RNPC3	96	45.698	ENSPMAG00000003778	rnpc3	98	45.038	Petromyzon_marinus
ENSOCUG00000004016	RNPC3	99	78.101	ENSPCIG00000004415	-	99	77.713	Phascolarctos_cinereus
ENSOCUG00000004016	RNPC3	95	53.000	ENSPFOG00000009895	rnpc3	97	52.906	Poecilia_formosa
ENSOCUG00000004016	RNPC3	95	53.000	ENSPLAG00000012023	rnpc3	97	52.906	Poecilia_latipinna
ENSOCUG00000004016	RNPC3	95	53.200	ENSPMEG00000003663	rnpc3	97	53.106	Poecilia_mexicana
ENSOCUG00000004016	RNPC3	96	52.381	ENSPREG00000010206	rnpc3	97	52.800	Poecilia_reticulata
ENSOCUG00000004016	RNPC3	84	87.788	ENSPPYG00000001102	RNPC3	99	87.788	Pongo_abelii
ENSOCUG00000004016	RNPC3	95	53.737	ENSPNYG00000020603	rnpc3	96	54.032	Pundamilia_nyererei
ENSOCUG00000004016	RNPC3	95	53.846	ENSPNAG00000000524	rnpc3	89	53.125	Pygocentrus_nattereri
ENSOCUG00000004016	RNPC3	99	87.209	ENSRNOG00000017310	Rnpc3	100	87.209	Rattus_norvegicus
ENSOCUG00000004016	RNPC3	99	86.047	ENSRBIG00000043897	RNPC3	99	86.047	Rhinopithecus_bieti
ENSOCUG00000004016	RNPC3	99	91.845	ENSRROG00000032334	RNPC3	99	91.845	Rhinopithecus_roxellana
ENSOCUG00000004016	RNPC3	100	90.698	ENSSBOG00000024473	RNPC3	100	90.698	Saimiri_boliviensis_boliviensis
ENSOCUG00000004016	RNPC3	99	77.027	ENSSHAG00000011859	RNPC3	99	77.326	Sarcophilus_harrisii
ENSOCUG00000004016	RNPC3	96	59.163	ENSSFOG00015013055	rnpc3	99	58.765	Scleropages_formosus
ENSOCUG00000004016	RNPC3	95	52.295	ENSSMAG00000020346	rnpc3	97	52.988	Scophthalmus_maximus
ENSOCUG00000004016	RNPC3	95	54.491	ENSSDUG00000006600	rnpc3	96	54.743	Seriola_dumerili
ENSOCUG00000004016	RNPC3	95	54.691	ENSSLDG00000007979	rnpc3	96	54.941	Seriola_lalandi_dorsalis
ENSOCUG00000004016	RNPC3	96	64.000	ENSSPUG00000003872	-	92	64.516	Sphenodon_punctatus
ENSOCUG00000004016	RNPC3	95	69.636	ENSSPUG00000008539	-	94	69.618	Sphenodon_punctatus
ENSOCUG00000004016	RNPC3	95	55.375	ENSSPAG00000005633	rnpc3	97	56.187	Stegastes_partitus
ENSOCUG00000004016	RNPC3	100	91.103	ENSSSCG00000037254	RNPC3	100	91.683	Sus_scrofa
ENSOCUG00000004016	RNPC3	88	70.861	ENSTGUG00000004795	-	99	69.316	Taeniopygia_guttata
ENSOCUG00000004016	RNPC3	95	54.217	ENSTNIG00000018963	rnpc3	97	54.709	Tetraodon_nigroviridis
ENSOCUG00000004016	RNPC3	98	91.929	ENSUMAG00000007775	RNPC3	100	91.929	Ursus_maritimus
ENSOCUG00000004016	RNPC3	100	91.313	ENSVVUG00000000331	RNPC3	100	91.313	Vulpes_vulpes
ENSOCUG00000004016	RNPC3	95	52.000	ENSXETG00000025027	rnpc3	97	52.000	Xenopus_tropicalis
ENSOCUG00000004016	RNPC3	95	53.386	ENSXCOG00000005013	rnpc3	97	53.892	Xiphophorus_couchianus
ENSOCUG00000004016	RNPC3	95	53.586	ENSXMAG00000006495	rnpc3	97	53.693	Xiphophorus_maculatus