EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000004139 (Gene tree)
Gene ID: 100338979
Gene Symbol: SF3B3
Alias: -
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 56962 bases
Position: chr5:28923038-28979999
Accession: 100338979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003584	CPSF_A	PF03178.15	1.8e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004142	SF3B3-201	3654	XM_008257598	ENSOCUP00000003584	1217 (aa)	XP_008255820	G1SL60

Gene Model

Click here to download ENSOCUG00000004139's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004139	SF3B3	100	97.617	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSOCUG00000004139	SF3B3	96	91.460	ENSAPOG00000006172	sf3b3	98	91.460	Acanthochromis_polyacanthus
ENSOCUG00000004139	SF3B3	100	97.295	ENSAMEG00000002187	SF3B3	100	97.295	Ailuropoda_melanoleuca
ENSOCUG00000004139	SF3B3	92	88.482	ENSACIG00000016487	sf3b3	100	88.482	Amphilophus_citrinellus
ENSOCUG00000004139	SF3B3	100	91.454	ENSAOCG00000007158	sf3b3	100	91.454	Amphiprion_ocellaris
ENSOCUG00000004139	SF3B3	100	91.454	ENSAPEG00000022786	sf3b3	100	91.454	Amphiprion_percula
ENSOCUG00000004139	SF3B3	100	91.454	ENSATEG00000013708	sf3b3	100	91.454	Anabas_testudineus
ENSOCUG00000004139	SF3B3	81	95.339	ENSAPLG00000004996	SF3B3	100	95.339	Anas_platyrhynchos
ENSOCUG00000004139	SF3B3	100	96.302	ENSACAG00000001817	SF3B3	100	96.302	Anolis_carolinensis
ENSOCUG00000004139	SF3B3	100	97.617	ENSANAG00000028001	SF3B3	99	100.000	Aotus_nancymaae
ENSOCUG00000004139	SF3B3	96	91.119	ENSACLG00000022555	sf3b3	98	91.119	Astatotilapia_calliptera
ENSOCUG00000004139	SF3B3	100	91.208	ENSAMXG00000003410	sf3b3	100	91.208	Astyanax_mexicanus
ENSOCUG00000004139	SF3B3	100	97.617	ENSBTAG00000010627	SF3B3	100	97.617	Bos_taurus
ENSOCUG00000004139	SF3B3	100	59.642	WBGene00019323	teg-4	100	59.642	Caenorhabditis_elegans
ENSOCUG00000004139	SF3B3	100	97.617	ENSCJAG00000014773	SF3B3	99	97.617	Callithrix_jacchus
ENSOCUG00000004139	SF3B3	100	97.535	ENSCAFG00000020151	SF3B3	100	97.535	Canis_familiaris
ENSOCUG00000004139	SF3B3	100	97.535	ENSCAFG00020020912	SF3B3	100	97.535	Canis_lupus_dingo
ENSOCUG00000004139	SF3B3	100	97.535	ENSCHIG00000019822	SF3B3	100	97.535	Capra_hircus
ENSOCUG00000004139	SF3B3	100	97.617	ENSTSYG00000007910	SF3B3	100	97.617	Carlito_syrichta
ENSOCUG00000004139	SF3B3	84	89.016	ENSCAPG00000001484	SF3B3	93	89.016	Cavia_aperea
ENSOCUG00000004139	SF3B3	100	96.302	ENSCPOG00000000586	SF3B3	100	96.302	Cavia_porcellus
ENSOCUG00000004139	SF3B3	100	97.617	ENSCCAG00000017736	SF3B3	100	97.617	Cebus_capucinus
ENSOCUG00000004139	SF3B3	100	97.617	ENSCATG00000036562	SF3B3	100	97.617	Cercocebus_atys
ENSOCUG00000004139	SF3B3	100	97.617	ENSCLAG00000003921	SF3B3	100	97.617	Chinchilla_lanigera
ENSOCUG00000004139	SF3B3	100	97.535	ENSCSAG00000004371	SF3B3	100	97.535	Chlorocebus_sabaeus
ENSOCUG00000004139	SF3B3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSOCUG00000004139	SF3B3	100	96.467	ENSCPBG00000015853	SF3B3	100	96.467	Chrysemys_picta_bellii
ENSOCUG00000004139	SF3B3	100	79.064	ENSCING00000001342	-	100	79.064	Ciona_intestinalis
ENSOCUG00000004139	SF3B3	99	77.750	ENSCSAVG00000011454	-	100	77.750	Ciona_savignyi
ENSOCUG00000004139	SF3B3	100	94.330	ENSCANG00000042920	SF3B3	100	94.330	Colobus_angolensis_palliatus
ENSOCUG00000004139	SF3B3	100	97.535	ENSCGRG00001015908	Sf3b3	100	97.535	Cricetulus_griseus_chok1gshd
ENSOCUG00000004139	SF3B3	100	97.535	ENSCGRG00000010180	Sf3b3	100	97.535	Cricetulus_griseus_crigri
ENSOCUG00000004139	SF3B3	82	90.020	ENSCSEG00000014192	sf3b3	99	90.020	Cynoglossus_semilaevis
ENSOCUG00000004139	SF3B3	100	90.633	ENSCVAG00000010459	sf3b3	100	90.633	Cyprinodon_variegatus
ENSOCUG00000004139	SF3B3	100	91.372	ENSDARG00000103553	sf3b3	100	91.372	Danio_rerio
ENSOCUG00000004139	SF3B3	85	97.203	ENSDNOG00000043626	SF3B3	100	97.203	Dasypus_novemcinctus
ENSOCUG00000004139	SF3B3	100	97.617	ENSDORG00000014176	Sf3b3	100	97.617	Dipodomys_ordii
ENSOCUG00000004139	SF3B3	100	73.431	FBgn0035162	Sf3b3	100	73.431	Drosophila_melanogaster
ENSOCUG00000004139	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSOCUG00000004139	SF3B3	100	85.703	ENSEBUG00000006117	sf3b3	100	85.703	Eptatretus_burgeri
ENSOCUG00000004139	SF3B3	100	97.535	ENSEASG00005013376	SF3B3	100	97.535	Equus_asinus_asinus
ENSOCUG00000004139	SF3B3	100	97.535	ENSECAG00000014053	SF3B3	100	97.535	Equus_caballus
ENSOCUG00000004139	SF3B3	93	99.643	ENSEEUG00000015611	SF3B3	93	99.643	Erinaceus_europaeus
ENSOCUG00000004139	SF3B3	100	89.593	ENSELUG00000015417	sf3b3	100	89.593	Esox_lucius
ENSOCUG00000004139	SF3B3	100	97.535	ENSFCAG00000009487	SF3B3	100	97.535	Felis_catus
ENSOCUG00000004139	SF3B3	100	96.631	ENSFALG00000007372	SF3B3	100	96.631	Ficedula_albicollis
ENSOCUG00000004139	SF3B3	100	97.535	ENSFDAG00000002608	SF3B3	100	97.535	Fukomys_damarensis
ENSOCUG00000004139	SF3B3	100	91.044	ENSFHEG00000017824	sf3b3	100	91.044	Fundulus_heteroclitus
ENSOCUG00000004139	SF3B3	100	87.438	ENSGMOG00000008139	sf3b3	100	87.438	Gadus_morhua
ENSOCUG00000004139	SF3B3	100	96.878	ENSGALG00000002531	SF3B3	100	96.878	Gallus_gallus
ENSOCUG00000004139	SF3B3	100	90.633	ENSGAFG00000015206	sf3b3	100	90.633	Gambusia_affinis
ENSOCUG00000004139	SF3B3	100	91.051	ENSGACG00000002646	sf3b3	100	91.051	Gasterosteus_aculeatus
ENSOCUG00000004139	SF3B3	96	96.413	ENSGAGG00000006746	SF3B3	97	96.413	Gopherus_agassizii
ENSOCUG00000004139	SF3B3	100	97.617	ENSGGOG00000003246	SF3B3	99	100.000	Gorilla_gorilla
ENSOCUG00000004139	SF3B3	92	83.571	ENSHBUG00000005960	sf3b3	100	84.732	Haplochromis_burtoni
ENSOCUG00000004139	SF3B3	100	97.617	ENSHGLG00000010135	SF3B3	100	97.617	Heterocephalus_glaber_female
ENSOCUG00000004139	SF3B3	100	95.458	ENSHGLG00100011148	SF3B3	100	95.458	Heterocephalus_glaber_male
ENSOCUG00000004139	SF3B3	100	90.715	ENSHCOG00000011981	sf3b3	100	90.715	Hippocampus_comes
ENSOCUG00000004139	SF3B3	100	91.126	ENSIPUG00000020435	sf3b3	100	91.126	Ictalurus_punctatus
ENSOCUG00000004139	SF3B3	100	97.617	ENSSTOG00000007065	SF3B3	100	97.617	Ictidomys_tridecemlineatus
ENSOCUG00000004139	SF3B3	100	97.617	ENSJJAG00000003948	Sf3b3	100	97.617	Jaculus_jaculus
ENSOCUG00000004139	SF3B3	100	88.825	ENSKMAG00000004066	sf3b3	99	90.948	Kryptolebias_marmoratus
ENSOCUG00000004139	SF3B3	100	90.961	ENSLBEG00000018302	sf3b3	100	90.961	Labrus_bergylta
ENSOCUG00000004139	SF3B3	98	90.116	ENSLACG00000012501	SF3B3	99	90.116	Latimeria_chalumnae
ENSOCUG00000004139	SF3B3	100	92.036	ENSLOCG00000007566	sf3b3	100	92.036	Lepisosteus_oculatus
ENSOCUG00000004139	SF3B3	100	97.535	ENSLAFG00000012219	SF3B3	100	97.535	Loxodonta_africana
ENSOCUG00000004139	SF3B3	100	97.617	ENSMFAG00000045487	SF3B3	100	97.617	Macaca_fascicularis
ENSOCUG00000004139	SF3B3	100	97.617	ENSMMUG00000017812	SF3B3	100	97.617	Macaca_mulatta
ENSOCUG00000004139	SF3B3	100	97.617	ENSMNEG00000033385	SF3B3	100	97.617	Macaca_nemestrina
ENSOCUG00000004139	SF3B3	100	94.084	ENSMLEG00000043891	SF3B3	97	100.000	Mandrillus_leucophaeus
ENSOCUG00000004139	SF3B3	100	91.537	ENSMAMG00000016837	sf3b3	100	91.537	Mastacembelus_armatus
ENSOCUG00000004139	SF3B3	89	87.974	ENSMZEG00005026015	sf3b3	99	87.974	Maylandia_zebra
ENSOCUG00000004139	SF3B3	100	91.126	ENSMZEG00005010836	sf3b3	100	91.126	Maylandia_zebra
ENSOCUG00000004139	SF3B3	100	96.878	ENSMGAG00000001597	SF3B3	100	96.878	Meleagris_gallopavo
ENSOCUG00000004139	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSOCUG00000004139	SF3B3	100	96.637	ENSMICG00000001363	SF3B3	100	96.637	Microcebus_murinus
ENSOCUG00000004139	SF3B3	100	97.535	ENSMOCG00000006108	Sf3b3	100	97.535	Microtus_ochrogaster
ENSOCUG00000004139	SF3B3	89	88.159	ENSMMOG00000002598	sf3b3	97	88.159	Mola_mola
ENSOCUG00000004139	SF3B3	100	92.939	ENSMODG00000014363	SF3B3	100	92.939	Monodelphis_domestica
ENSOCUG00000004139	SF3B3	100	91.208	ENSMALG00000008014	sf3b3	100	91.208	Monopterus_albus
ENSOCUG00000004139	SF3B3	100	97.453	MGP_CAROLIEiJ_G0031563	Sf3b3	100	97.453	Mus_caroli
ENSOCUG00000004139	SF3B3	100	97.535	ENSMUSG00000033732	Sf3b3	100	97.535	Mus_musculus
ENSOCUG00000004139	SF3B3	100	97.453	MGP_SPRETEiJ_G0032681	Sf3b3	100	97.453	Mus_spretus
ENSOCUG00000004139	SF3B3	100	97.535	ENSMPUG00000010277	SF3B3	100	97.535	Mustela_putorius_furo
ENSOCUG00000004139	SF3B3	100	97.453	ENSMLUG00000014607	SF3B3	100	97.453	Myotis_lucifugus
ENSOCUG00000004139	SF3B3	100	97.617	ENSNGAG00000021903	Sf3b3	100	97.617	Nannospalax_galili
ENSOCUG00000004139	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSOCUG00000004139	SF3B3	100	96.141	ENSNLEG00000016127	SF3B3	99	100.000	Nomascus_leucogenys
ENSOCUG00000004139	SF3B3	92	98.945	ENSMEUG00000004479	SF3B3	94	98.945	Notamacropus_eugenii
ENSOCUG00000004139	SF3B3	98	94.300	ENSOPRG00000009847	SF3B3	100	94.300	Ochotona_princeps
ENSOCUG00000004139	SF3B3	100	97.535	ENSODEG00000014154	SF3B3	100	97.535	Octodon_degus
ENSOCUG00000004139	SF3B3	100	91.372	ENSONIG00000011198	sf3b3	100	91.372	Oreochromis_niloticus
ENSOCUG00000004139	SF3B3	100	97.288	ENSOANG00000001161	-	100	97.288	Ornithorhynchus_anatinus
ENSOCUG00000004139	SF3B3	100	91.290	ENSORLG00000013472	sf3b3	100	91.290	Oryzias_latipes
ENSOCUG00000004139	SF3B3	100	91.290	ENSORLG00020017473	sf3b3	100	91.290	Oryzias_latipes_hni
ENSOCUG00000004139	SF3B3	100	91.290	ENSORLG00015007710	sf3b3	100	91.290	Oryzias_latipes_hsok
ENSOCUG00000004139	SF3B3	100	90.961	ENSOMEG00000014483	sf3b3	100	90.961	Oryzias_melastigma
ENSOCUG00000004139	SF3B3	100	97.213	ENSOGAG00000016051	SF3B3	100	97.213	Otolemur_garnettii
ENSOCUG00000004139	SF3B3	100	97.295	ENSOARG00000004816	SF3B3	100	97.295	Ovis_aries
ENSOCUG00000004139	SF3B3	100	97.617	ENSPPAG00000026807	SF3B3	99	100.000	Pan_paniscus
ENSOCUG00000004139	SF3B3	100	97.535	ENSPPRG00000001686	SF3B3	100	97.535	Panthera_pardus
ENSOCUG00000004139	SF3B3	89	94.204	ENSPTIG00000020382	SF3B3	100	94.204	Panthera_tigris_altaica
ENSOCUG00000004139	SF3B3	100	97.617	ENSPTRG00000008308	SF3B3	99	100.000	Pan_troglodytes
ENSOCUG00000004139	SF3B3	100	97.617	ENSPANG00000024075	SF3B3	100	97.617	Papio_anubis
ENSOCUG00000004139	SF3B3	100	90.879	ENSPKIG00000002712	sf3b3	100	90.879	Paramormyrops_kingsleyae
ENSOCUG00000004139	SF3B3	89	96.320	ENSPSIG00000002232	SF3B3	100	96.320	Pelodiscus_sinensis
ENSOCUG00000004139	SF3B3	100	97.535	ENSPEMG00000008603	Sf3b3	100	97.535	Peromyscus_maniculatus_bairdii
ENSOCUG00000004139	SF3B3	100	89.811	ENSPMAG00000001793	sf3b3	100	89.811	Petromyzon_marinus
ENSOCUG00000004139	SF3B3	100	97.288	ENSPCIG00000014927	SF3B3	100	97.288	Phascolarctos_cinereus
ENSOCUG00000004139	SF3B3	100	90.715	ENSPFOG00000015516	sf3b3	100	90.715	Poecilia_formosa
ENSOCUG00000004139	SF3B3	100	90.715	ENSPLAG00000014330	sf3b3	100	90.715	Poecilia_latipinna
ENSOCUG00000004139	SF3B3	100	90.797	ENSPMEG00000019856	sf3b3	100	90.797	Poecilia_mexicana
ENSOCUG00000004139	SF3B3	81	91.159	ENSPREG00000019669	sf3b3	97	91.159	Poecilia_reticulata
ENSOCUG00000004139	SF3B3	95	99.254	ENSPPYG00000007539	SF3B3	100	99.254	Pongo_abelii
ENSOCUG00000004139	SF3B3	100	79.047	ENSPCAG00000002623	SF3B3	100	79.047	Procavia_capensis
ENSOCUG00000004139	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSOCUG00000004139	SF3B3	100	97.453	ENSPVAG00000000684	SF3B3	100	97.453	Pteropus_vampyrus
ENSOCUG00000004139	SF3B3	100	91.208	ENSPNYG00000003528	sf3b3	100	91.208	Pundamilia_nyererei
ENSOCUG00000004139	SF3B3	100	91.537	ENSPNAG00000015419	sf3b3	100	91.537	Pygocentrus_nattereri
ENSOCUG00000004139	SF3B3	100	97.535	ENSRNOG00000017724	Sf3b3	100	97.535	Rattus_norvegicus
ENSOCUG00000004139	SF3B3	100	97.617	ENSRBIG00000021904	SF3B3	100	97.617	Rhinopithecus_bieti
ENSOCUG00000004139	SF3B3	100	97.617	ENSRROG00000045703	SF3B3	100	97.617	Rhinopithecus_roxellana
ENSOCUG00000004139	SF3B3	100	97.617	ENSSBOG00000029156	SF3B3	99	100.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000004139	SF3B3	100	97.288	ENSSHAG00000000372	SF3B3	100	97.288	Sarcophilus_harrisii
ENSOCUG00000004139	SF3B3	100	91.783	ENSSFOG00015012877	sf3b3	100	91.783	Scleropages_formosus
ENSOCUG00000004139	SF3B3	100	90.879	ENSSMAG00000014386	sf3b3	100	90.879	Scophthalmus_maximus
ENSOCUG00000004139	SF3B3	100	91.619	ENSSDUG00000021201	sf3b3	100	91.619	Seriola_dumerili
ENSOCUG00000004139	SF3B3	100	91.537	ENSSLDG00000017532	sf3b3	100	91.537	Seriola_lalandi_dorsalis
ENSOCUG00000004139	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSOCUG00000004139	SF3B3	100	96.631	ENSSPUG00000006253	SF3B3	100	96.631	Sphenodon_punctatus
ENSOCUG00000004139	SF3B3	100	83.730	ENSSPAG00000003125	sf3b3	100	83.730	Stegastes_partitus
ENSOCUG00000004139	SF3B3	100	97.535	ENSSSCG00000025323	SF3B3	100	97.535	Sus_scrofa
ENSOCUG00000004139	SF3B3	100	96.798	ENSTGUG00000006082	SF3B3	100	96.798	Taeniopygia_guttata
ENSOCUG00000004139	SF3B3	89	90.809	ENSTNIG00000004857	sf3b3	100	90.809	Tetraodon_nigroviridis
ENSOCUG00000004139	SF3B3	93	85.651	ENSTBEG00000002946	SF3B3	100	85.651	Tupaia_belangeri
ENSOCUG00000004139	SF3B3	100	96.713	ENSTTRG00000005855	SF3B3	100	96.713	Tursiops_truncatus
ENSOCUG00000004139	SF3B3	100	97.535	ENSUAMG00000006780	SF3B3	100	97.535	Ursus_americanus
ENSOCUG00000004139	SF3B3	100	97.535	ENSUMAG00000017757	SF3B3	100	97.535	Ursus_maritimus
ENSOCUG00000004139	SF3B3	100	81.348	ENSVPAG00000003202	SF3B3	100	81.348	Vicugna_pacos
ENSOCUG00000004139	SF3B3	100	97.453	ENSVVUG00000017922	SF3B3	100	97.453	Vulpes_vulpes
ENSOCUG00000004139	SF3B3	100	94.577	ENSXETG00000032869	SF3B3	100	94.577	Xenopus_tropicalis
ENSOCUG00000004139	SF3B3	77	91.614	ENSXCOG00000013628	sf3b3	97	91.614	Xiphophorus_couchianus
ENSOCUG00000004139	SF3B3	100	90.715	ENSXMAG00000006334	sf3b3	100	90.715	Xiphophorus_maculatus