EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000004164 (Gene tree)
Gene ID: -
Gene Symbol: ZMAT1
Alias: -
Full Name: zinc finger matrin-type 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 12085 bases
Position: chrX:87543715-87555799
Accession: 29377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003602	zf-met	PF12874.7	8.5e-17	1	3
ENSOCUP00000003602	zf-met	PF12874.7	8.5e-17	2	3
ENSOCUP00000003602	zf-met	PF12874.7	8.5e-17	3	3
ENSOCUP00000003602	zf-C2H2_jaz	PF12171.8	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004163	ZMAT1-201	3017	-	ENSOCUP00000003602	611 (aa)	-	G1SL76

Gene Model

Click here to download ENSOCUG00000004164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004164	ZMAT1	93	66.667	ENSG00000166432	ZMAT1	82	66.667	Homo_sapiens
ENSOCUG00000004164	ZMAT1	100	71.685	ENSAMEG00000004976	ZMAT1	88	71.111	Ailuropoda_melanoleuca
ENSOCUG00000004164	ZMAT1	100	60.753	ENSANAG00000028725	ZMAT1	91	60.503	Aotus_nancymaae
ENSOCUG00000004164	ZMAT1	99	68.078	ENSBTAG00000003601	ZMAT1	100	67.915	Bos_taurus
ENSOCUG00000004164	ZMAT1	93	63.534	ENSCJAG00000019724	ZMAT1	87	63.534	Callithrix_jacchus
ENSOCUG00000004164	ZMAT1	94	75.556	ENSCAFG00000017730	ZMAT1	88	75.556	Canis_familiaris
ENSOCUG00000004164	ZMAT1	77	66.737	ENSCAFG00020007319	ZMAT1	100	66.526	Canis_lupus_dingo
ENSOCUG00000004164	ZMAT1	77	66.318	ENSCHIG00000010507	ZMAT1	100	66.109	Capra_hircus
ENSOCUG00000004164	ZMAT1	99	61.538	ENSTSYG00000007330	ZMAT1	88	61.351	Carlito_syrichta
ENSOCUG00000004164	ZMAT1	87	50.829	ENSCPOG00000000581	ZMAT1	86	50.829	Cavia_porcellus
ENSOCUG00000004164	ZMAT1	93	63.910	ENSCCAG00000023924	ZMAT1	87	63.910	Cebus_capucinus
ENSOCUG00000004164	ZMAT1	95	64.912	ENSCATG00000000551	ZMAT1	85	64.444	Cercocebus_atys
ENSOCUG00000004164	ZMAT1	93	60.465	ENSCLAG00000004197	ZMAT1	84	60.465	Chinchilla_lanigera
ENSOCUG00000004164	ZMAT1	100	62.138	ENSCSAG00000009795	ZMAT1	76	61.470	Chlorocebus_sabaeus
ENSOCUG00000004164	ZMAT1	91	54.839	ENSCPBG00000001356	ZMAT1	77	52.991	Chrysemys_picta_bellii
ENSOCUG00000004164	ZMAT1	93	66.667	ENSCANG00000037194	ZMAT1	87	66.667	Colobus_angolensis_palliatus
ENSOCUG00000004164	ZMAT1	86	49.468	ENSCGRG00001023697	Zmat1	89	49.823	Cricetulus_griseus_chok1gshd
ENSOCUG00000004164	ZMAT1	86	49.468	ENSCGRG00000001964	Zmat1	94	46.009	Cricetulus_griseus_crigri
ENSOCUG00000004164	ZMAT1	100	58.724	ENSDNOG00000014852	-	92	58.537	Dasypus_novemcinctus
ENSOCUG00000004164	ZMAT1	77	49.491	ENSDNOG00000044924	-	99	48.880	Dasypus_novemcinctus
ENSOCUG00000004164	ZMAT1	99	51.818	ENSDORG00000006821	Zmat1	90	51.455	Dipodomys_ordii
ENSOCUG00000004164	ZMAT1	89	46.154	ENSETEG00000020259	ZMAT1	87	46.881	Echinops_telfairi
ENSOCUG00000004164	ZMAT1	100	60.000	ENSEASG00005014185	ZMAT1	82	59.626	Equus_asinus_asinus
ENSOCUG00000004164	ZMAT1	100	70.874	ENSECAG00000013390	ZMAT1	100	67.857	Equus_caballus
ENSOCUG00000004164	ZMAT1	100	67.099	ENSFCAG00000023394	ZMAT1	88	66.937	Felis_catus
ENSOCUG00000004164	ZMAT1	100	54.766	ENSFDAG00000004063	ZMAT1	80	54.766	Fukomys_damarensis
ENSOCUG00000004164	ZMAT1	78	54.419	ENSGAGG00000002326	ZMAT1	80	51.626	Gopherus_agassizii
ENSOCUG00000004164	ZMAT1	93	66.667	ENSGGOG00000025784	ZMAT1	83	66.667	Gorilla_gorilla
ENSOCUG00000004164	ZMAT1	100	51.943	ENSHGLG00000002494	ZMAT1	88	50.662	Heterocephalus_glaber_female
ENSOCUG00000004164	ZMAT1	100	54.113	ENSHGLG00100004968	ZMAT1	89	54.113	Heterocephalus_glaber_male
ENSOCUG00000004164	ZMAT1	86	59.494	ENSSTOG00000011140	ZMAT1	99	60.074	Ictidomys_tridecemlineatus
ENSOCUG00000004164	ZMAT1	98	46.635	ENSJJAG00000020188	Zmat1	90	49.365	Jaculus_jaculus
ENSOCUG00000004164	ZMAT1	100	49.353	ENSLAFG00000015656	ZMAT1	91	49.838	Loxodonta_africana
ENSOCUG00000004164	ZMAT1	82	64.444	ENSMFAG00000042343	ZMAT1	73	64.444	Macaca_fascicularis
ENSOCUG00000004164	ZMAT1	100	62.138	ENSMMUG00000002151	ZMAT1	83	64.444	Macaca_mulatta
ENSOCUG00000004164	ZMAT1	100	61.957	ENSMNEG00000036310	ZMAT1	83	64.444	Macaca_nemestrina
ENSOCUG00000004164	ZMAT1	93	66.667	ENSMLEG00000005031	ZMAT1	83	66.667	Mandrillus_leucophaeus
ENSOCUG00000004164	ZMAT1	86	50.896	ENSMAUG00000002941	Zmat1	90	51.254	Mesocricetus_auratus
ENSOCUG00000004164	ZMAT1	93	75.556	ENSMICG00000003313	ZMAT1	87	75.556	Microcebus_murinus
ENSOCUG00000004164	ZMAT1	98	47.195	ENSMOCG00000000169	Zmat1	89	50.377	Microtus_ochrogaster
ENSOCUG00000004164	ZMAT1	86	49.642	ENSMUSG00000052676	Zmat1	85	50.179	Mus_musculus
ENSOCUG00000004164	ZMAT1	84	49.727	MGP_PahariEiJ_G0031943	Zmat1	88	50.273	Mus_pahari
ENSOCUG00000004164	ZMAT1	86	49.548	MGP_SPRETEiJ_G0034567	Zmat1	85	50.090	Mus_spretus
ENSOCUG00000004164	ZMAT1	100	69.417	ENSMPUG00000002130	ZMAT1	88	69.256	Mustela_putorius_furo
ENSOCUG00000004164	ZMAT1	94	66.667	ENSMLUG00000004417	ZMAT1	88	66.667	Myotis_lucifugus
ENSOCUG00000004164	ZMAT1	86	50.000	ENSNGAG00000006608	Zmat1	89	50.725	Nannospalax_galili
ENSOCUG00000004164	ZMAT1	93	66.667	ENSNLEG00000030520	ZMAT1	81	66.667	Nomascus_leucogenys
ENSOCUG00000004164	ZMAT1	67	62.864	ENSOPRG00000009950	-	100	64.165	Ochotona_princeps
ENSOCUG00000004164	ZMAT1	94	77.778	ENSOGAG00000033601	ZMAT1	88	61.869	Otolemur_garnettii
ENSOCUG00000004164	ZMAT1	100	68.710	ENSOARG00000001897	ZMAT1	87	68.548	Ovis_aries
ENSOCUG00000004164	ZMAT1	93	66.667	ENSPPAG00000039554	ZMAT1	83	66.667	Pan_paniscus
ENSOCUG00000004164	ZMAT1	93	73.333	ENSPPRG00000005258	ZMAT1	87	73.333	Panthera_pardus
ENSOCUG00000004164	ZMAT1	94	73.333	ENSPTIG00000019057	ZMAT1	88	73.333	Panthera_tigris_altaica
ENSOCUG00000004164	ZMAT1	100	62.319	ENSPTRG00000041840	ZMAT1	83	66.667	Pan_troglodytes
ENSOCUG00000004164	ZMAT1	86	50.808	ENSPEMG00000009944	Zmat1	89	50.269	Peromyscus_maniculatus_bairdii
ENSOCUG00000004164	ZMAT1	100	61.394	ENSPPYG00000020561	ZMAT1	81	61.394	Pongo_abelii
ENSOCUG00000004164	ZMAT1	93	54.545	ENSPCAG00000010283	ZMAT1	87	54.545	Procavia_capensis
ENSOCUG00000004164	ZMAT1	94	73.333	ENSPCOG00000021386	ZMAT1	88	64.207	Propithecus_coquereli
ENSOCUG00000004164	ZMAT1	94	64.444	ENSPVAG00000013206	ZMAT1	88	64.444	Pteropus_vampyrus
ENSOCUG00000004164	ZMAT1	86	50.540	ENSRNOG00000024135	Zmat1	84	50.360	Rattus_norvegicus
ENSOCUG00000004164	ZMAT1	93	66.667	ENSRBIG00000034121	ZMAT1	83	66.667	Rhinopithecus_bieti
ENSOCUG00000004164	ZMAT1	93	66.667	ENSRROG00000036747	ZMAT1	82	66.667	Rhinopithecus_roxellana
ENSOCUG00000004164	ZMAT1	99	60.932	ENSSBOG00000029970	ZMAT1	87	65.116	Saimiri_boliviensis_boliviensis
ENSOCUG00000004164	ZMAT1	100	46.931	ENSSHAG00000011087	-	87	47.445	Sarcophilus_harrisii
ENSOCUG00000004164	ZMAT1	82	48.729	ENSSPUG00000004951	ZMAT1	77	48.333	Sphenodon_punctatus
ENSOCUG00000004164	ZMAT1	100	67.147	ENSSSCG00000012512	ZMAT1	100	65.966	Sus_scrofa
ENSOCUG00000004164	ZMAT1	93	64.444	ENSTBEG00000012967	ZMAT1	93	64.444	Tupaia_belangeri
ENSOCUG00000004164	ZMAT1	94	73.333	ENSTTRG00000016662	ZMAT1	88	64.045	Tursiops_truncatus
ENSOCUG00000004164	ZMAT1	77	67.017	ENSUAMG00000015209	ZMAT1	100	66.807	Ursus_americanus
ENSOCUG00000004164	ZMAT1	77	67.017	ENSUMAG00000000627	ZMAT1	100	66.807	Ursus_maritimus
ENSOCUG00000004164	ZMAT1	100	64.595	ENSVPAG00000006267	ZMAT1	87	64.595	Vicugna_pacos
ENSOCUG00000004164	ZMAT1	86	60.963	ENSVVUG00000005342	ZMAT1	81	60.784	Vulpes_vulpes
ENSOCUG00000004164	ZMAT1	57	59.091	ENSXETG00000001949	krcc1	82	45.778	Xenopus_tropicalis