EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004189 (Gene tree)
Gene ID: 100338369
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 43660 bases
Position: chr1:51641068-51684727
Accession: 100338369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003624	CPL	PF08144.11	2.7e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004189	-	2258	XM_002708183	ENSOCUP00000003624	647 (aa)	XP_002708229	G1SL97

Gene Model

Click here to download ENSOCUG00000004189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004189	-	99	97.981	ENSOCUG00000026104	-	100	97.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004189	-	100	90.741	ENSG00000080608	PUM3	100	90.741	Homo_sapiens
ENSOCUG00000004189	-	99	53.485	ENSAPOG00000020252	pum3	99	53.333	Acanthochromis_polyacanthus
ENSOCUG00000004189	-	100	91.036	ENSAMEG00000012187	PUM3	100	91.036	Ailuropoda_melanoleuca
ENSOCUG00000004189	-	86	55.793	ENSACIG00000009786	pum3	86	57.582	Amphilophus_citrinellus
ENSOCUG00000004189	-	99	54.242	ENSAOCG00000004439	pum3	99	54.091	Amphiprion_ocellaris
ENSOCUG00000004189	-	99	54.242	ENSAPEG00000020523	pum3	99	54.091	Amphiprion_percula
ENSOCUG00000004189	-	83	62.056	ENSATEG00000005799	pum3	82	62.049	Anabas_testudineus
ENSOCUG00000004189	-	96	72.830	ENSAPLG00000002920	PUM3	100	72.830	Anas_platyrhynchos
ENSOCUG00000004189	-	93	68.317	ENSACAG00000003174	PUM3	99	70.432	Anolis_carolinensis
ENSOCUG00000004189	-	100	90.417	ENSANAG00000024520	PUM3	100	90.417	Aotus_nancymaae
ENSOCUG00000004189	-	99	54.993	ENSACLG00000001017	pum3	99	55.083	Astatotilapia_calliptera
ENSOCUG00000004189	-	92	65.604	ENSAMXG00000020911	pum3	93	65.604	Astyanax_mexicanus
ENSOCUG00000004189	-	100	90.726	ENSBTAG00000013357	PUM3	100	90.726	Bos_taurus
ENSOCUG00000004189	-	75	32.596	WBGene00014165	puf-12	64	31.590	Caenorhabditis_elegans
ENSOCUG00000004189	-	100	90.263	ENSCJAG00000010917	PUM3	100	90.263	Callithrix_jacchus
ENSOCUG00000004189	-	100	90.572	ENSCAFG00000002035	PUM3	99	90.572	Canis_familiaris
ENSOCUG00000004189	-	100	90.417	ENSCAFG00020026867	PUM3	99	90.417	Canis_lupus_dingo
ENSOCUG00000004189	-	100	90.263	ENSCHIG00000021559	PUM3	100	90.263	Capra_hircus
ENSOCUG00000004189	-	100	90.263	ENSTSYG00000007481	PUM3	100	90.263	Carlito_syrichta
ENSOCUG00000004189	-	100	86.111	ENSCAPG00000010592	-	99	86.111	Cavia_aperea
ENSOCUG00000004189	-	100	87.790	ENSCPOG00000008552	-	99	87.790	Cavia_porcellus
ENSOCUG00000004189	-	100	89.799	ENSCCAG00000032650	PUM3	100	89.799	Cebus_capucinus
ENSOCUG00000004189	-	100	91.190	ENSCATG00000024880	PUM3	100	91.190	Cercocebus_atys
ENSOCUG00000004189	-	100	89.799	ENSCLAG00000011892	PUM3	99	89.799	Chinchilla_lanigera
ENSOCUG00000004189	-	100	91.499	ENSCSAG00000008691	PUM3	100	91.499	Chlorocebus_sabaeus
ENSOCUG00000004189	-	100	69.861	ENSCHOG00000002535	PUM3	95	69.861	Choloepus_hoffmanni
ENSOCUG00000004189	-	100	72.025	ENSCPBG00000025470	PUM3	95	72.025	Chrysemys_picta_bellii
ENSOCUG00000004189	-	81	39.854	ENSCING00000024199	-	87	40.326	Ciona_intestinalis
ENSOCUG00000004189	-	91	38.816	ENSCSAVG00000006072	-	99	40.571	Ciona_savignyi
ENSOCUG00000004189	-	100	91.036	ENSCANG00000006142	PUM3	100	91.036	Colobus_angolensis_palliatus
ENSOCUG00000004189	-	100	89.490	ENSCGRG00001016402	Pum3	99	89.490	Cricetulus_griseus_chok1gshd
ENSOCUG00000004189	-	100	89.490	ENSCGRG00000010207	Pum3	99	89.490	Cricetulus_griseus_crigri
ENSOCUG00000004189	-	89	57.021	ENSCSEG00000001565	pum3	99	56.973	Cynoglossus_semilaevis
ENSOCUG00000004189	-	61	51.481	ENSCVAG00000006550	pum3	74	51.471	Cyprinodon_variegatus
ENSOCUG00000004189	-	94	66.561	ENSDARG00000087779	pum3	99	65.764	Danio_rerio
ENSOCUG00000004189	-	100	78.154	ENSDNOG00000008157	PUM3	70	78.549	Dasypus_novemcinctus
ENSOCUG00000004189	-	81	83.681	ENSETEG00000015331	PUM3	81	83.681	Echinops_telfairi
ENSOCUG00000004189	-	80	40.458	ENSEBUG00000011586	pum3	75	41.188	Eptatretus_burgeri
ENSOCUG00000004189	-	99	92.105	ENSEASG00005010350	PUM3	100	91.963	Equus_asinus_asinus
ENSOCUG00000004189	-	99	92.260	ENSECAG00000017193	PUM3	100	92.117	Equus_caballus
ENSOCUG00000004189	-	93	82.753	ENSEEUG00000010314	PUM3	100	82.753	Erinaceus_europaeus
ENSOCUG00000004189	-	94	62.400	ENSELUG00000002215	pum3	97	62.400	Esox_lucius
ENSOCUG00000004189	-	100	71.012	ENSFALG00000010509	PUM3	100	71.012	Ficedula_albicollis
ENSOCUG00000004189	-	100	89.181	ENSFDAG00000021027	PUM3	99	89.181	Fukomys_damarensis
ENSOCUG00000004189	-	89	58.901	ENSFHEG00000015576	pum3	99	58.901	Fundulus_heteroclitus
ENSOCUG00000004189	-	83	61.194	ENSGMOG00000014217	pum3	97	61.185	Gadus_morhua
ENSOCUG00000004189	-	99	70.046	ENSGALG00000010178	PUM3	100	70.046	Gallus_gallus
ENSOCUG00000004189	-	55	60.497	ENSGAFG00000001930	pum3	62	60.497	Gambusia_affinis
ENSOCUG00000004189	-	82	60.338	ENSGACG00000017878	pum3	96	60.456	Gasterosteus_aculeatus
ENSOCUG00000004189	-	100	72.025	ENSGAGG00000018983	PUM3	98	73.065	Gopherus_agassizii
ENSOCUG00000004189	-	100	91.190	ENSGGOG00000006143	PUM3	100	91.190	Gorilla_gorilla
ENSOCUG00000004189	-	99	49.847	ENSHBUG00000012903	pum3	99	47.866	Haplochromis_burtoni
ENSOCUG00000004189	-	100	89.181	ENSHGLG00000015868	-	99	89.181	Heterocephalus_glaber_female
ENSOCUG00000004189	-	100	89.181	ENSHGLG00100018825	PUM3	100	89.181	Heterocephalus_glaber_male
ENSOCUG00000004189	-	91	58.086	ENSHCOG00000010306	pum3	99	54.260	Hippocampus_comes
ENSOCUG00000004189	-	87	67.434	ENSIPUG00000024801	pum3	98	62.599	Ictalurus_punctatus
ENSOCUG00000004189	-	100	91.036	ENSSTOG00000009586	PUM3	99	91.036	Ictidomys_tridecemlineatus
ENSOCUG00000004189	-	99	88.527	ENSJJAG00000012563	Pum3	99	88.390	Jaculus_jaculus
ENSOCUG00000004189	-	91	56.998	ENSKMAG00000010277	pum3	95	53.632	Kryptolebias_marmoratus
ENSOCUG00000004189	-	99	53.474	ENSLBEG00000012213	pum3	99	53.927	Labrus_bergylta
ENSOCUG00000004189	-	100	65.697	ENSLACG00000008312	PUM3	100	65.697	Latimeria_chalumnae
ENSOCUG00000004189	-	99	65.635	ENSLOCG00000012529	pum3	99	65.533	Lepisosteus_oculatus
ENSOCUG00000004189	-	100	88.872	ENSLAFG00000017341	PUM3	99	88.872	Loxodonta_africana
ENSOCUG00000004189	-	100	91.345	ENSMFAG00000001430	PUM3	100	91.345	Macaca_fascicularis
ENSOCUG00000004189	-	100	91.345	ENSMMUG00000002362	PUM3	99	91.345	Macaca_mulatta
ENSOCUG00000004189	-	100	91.345	ENSMNEG00000035288	PUM3	100	91.345	Macaca_nemestrina
ENSOCUG00000004189	-	100	91.345	ENSMLEG00000034820	PUM3	100	91.345	Mandrillus_leucophaeus
ENSOCUG00000004189	-	85	58.730	ENSMAMG00000022861	pum3	98	55.573	Mastacembelus_armatus
ENSOCUG00000004189	-	99	55.007	ENSMZEG00005014205	pum3	97	55.251	Maylandia_zebra
ENSOCUG00000004189	-	96	64.904	ENSMGAG00000002255	PUM3	99	64.348	Meleagris_gallopavo
ENSOCUG00000004189	-	100	89.181	ENSMAUG00000009733	Pum3	99	89.181	Mesocricetus_auratus
ENSOCUG00000004189	-	99	91.796	ENSMICG00000045916	PUM3	87	91.796	Microcebus_murinus
ENSOCUG00000004189	-	100	84.699	ENSMOCG00000014830	-	100	84.235	Microtus_ochrogaster
ENSOCUG00000004189	-	100	89.335	ENSMOCG00000019519	-	99	89.335	Microtus_ochrogaster
ENSOCUG00000004189	-	92	53.247	ENSMMOG00000012184	pum3	99	52.273	Mola_mola
ENSOCUG00000004189	-	100	68.516	ENSMODG00000015417	PUM3	99	73.089	Monodelphis_domestica
ENSOCUG00000004189	-	83	60.000	ENSMALG00000022164	pum3	91	53.120	Monopterus_albus
ENSOCUG00000004189	-	100	88.717	MGP_CAROLIEiJ_G0022845	Pum3	99	88.717	Mus_caroli
ENSOCUG00000004189	-	100	88.717	ENSMUSG00000041360	Pum3	99	88.717	Mus_musculus
ENSOCUG00000004189	-	99	88.854	MGP_PahariEiJ_G0014338	Pum3	99	88.854	Mus_pahari
ENSOCUG00000004189	-	100	88.872	MGP_SPRETEiJ_G0023763	Pum3	99	88.872	Mus_spretus
ENSOCUG00000004189	-	100	88.872	ENSMPUG00000005125	PUM3	100	88.872	Mustela_putorius_furo
ENSOCUG00000004189	-	99	89.783	ENSMLUG00000002309	PUM3	99	89.783	Myotis_lucifugus
ENSOCUG00000004189	-	100	87.057	ENSNGAG00000019468	Pum3	100	87.057	Nannospalax_galili
ENSOCUG00000004189	-	84	57.847	ENSNBRG00000021370	pum3	79	60.636	Neolamprologus_brichardi
ENSOCUG00000004189	-	100	90.881	ENSNLEG00000008712	PUM3	100	90.881	Nomascus_leucogenys
ENSOCUG00000004189	-	75	60.370	ENSMEUG00000013606	-	96	58.884	Notamacropus_eugenii
ENSOCUG00000004189	-	79	86.047	ENSOPRG00000004225	-	79	86.047	Ochotona_princeps
ENSOCUG00000004189	-	100	83.538	ENSODEG00000016477	-	100	83.538	Octodon_degus
ENSOCUG00000004189	-	100	89.181	ENSODEG00000003625	-	99	89.181	Octodon_degus
ENSOCUG00000004189	-	99	53.916	ENSONIG00000012733	pum3	99	53.916	Oreochromis_niloticus
ENSOCUG00000004189	-	81	79.735	ENSOANG00000014995	PUM3	97	79.735	Ornithorhynchus_anatinus
ENSOCUG00000004189	-	91	54.223	ENSORLG00000014935	pum3	99	50.226	Oryzias_latipes
ENSOCUG00000004189	-	92	54.620	ENSORLG00020002841	pum3	96	52.827	Oryzias_latipes_hni
ENSOCUG00000004189	-	99	51.442	ENSORLG00015015906	pum3	99	50.377	Oryzias_latipes_hsok
ENSOCUG00000004189	-	91	54.726	ENSOMEG00000009427	pum3	96	53.398	Oryzias_melastigma
ENSOCUG00000004189	-	99	67.125	ENSOGAG00000033481	-	99	65.749	Otolemur_garnettii
ENSOCUG00000004189	-	100	89.660	ENSOGAG00000008125	-	100	89.660	Otolemur_garnettii
ENSOCUG00000004189	-	100	89.676	ENSOARG00000013337	PUM3	100	89.676	Ovis_aries
ENSOCUG00000004189	-	100	91.049	ENSPPAG00000041337	PUM3	100	91.049	Pan_paniscus
ENSOCUG00000004189	-	100	89.026	ENSPPRG00000000809	PUM3	100	89.026	Panthera_pardus
ENSOCUG00000004189	-	100	89.645	ENSPTIG00000021934	PUM3	100	89.645	Panthera_tigris_altaica
ENSOCUG00000004189	-	100	91.204	ENSPTRG00000020735	PUM3	100	91.204	Pan_troglodytes
ENSOCUG00000004189	-	100	91.963	ENSPANG00000025118	PUM3	100	91.963	Papio_anubis
ENSOCUG00000004189	-	99	63.166	ENSPKIG00000022249	pum3	97	63.934	Paramormyrops_kingsleyae
ENSOCUG00000004189	-	100	71.252	ENSPSIG00000016272	PUM3	100	71.252	Pelodiscus_sinensis
ENSOCUG00000004189	-	76	60.692	ENSPMGG00000021261	pum3	98	60.692	Periophthalmus_magnuspinnatus
ENSOCUG00000004189	-	100	74.268	ENSPEMG00000019340	-	100	83.019	Peromyscus_maniculatus_bairdii
ENSOCUG00000004189	-	100	72.824	ENSPCIG00000030598	PUM3	97	72.824	Phascolarctos_cinereus
ENSOCUG00000004189	-	91	55.593	ENSPFOG00000001719	pum3	98	55.276	Poecilia_formosa
ENSOCUG00000004189	-	97	53.774	ENSPLAG00000020010	pum3	99	53.918	Poecilia_latipinna
ENSOCUG00000004189	-	97	53.774	ENSPMEG00000017451	pum3	99	53.774	Poecilia_mexicana
ENSOCUG00000004189	-	51	46.759	ENSPREG00000019478	-	69	64.211	Poecilia_reticulata
ENSOCUG00000004189	-	100	91.345	ENSPPYG00000019255	PUM3	100	91.345	Pongo_abelii
ENSOCUG00000004189	-	100	76.816	ENSPCAG00000005797	PUM3	95	76.816	Procavia_capensis
ENSOCUG00000004189	-	100	91.036	ENSPCOG00000027325	PUM3	100	91.036	Propithecus_coquereli
ENSOCUG00000004189	-	100	87.481	ENSPVAG00000016135	PUM3	95	87.481	Pteropus_vampyrus
ENSOCUG00000004189	-	99	54.993	ENSPNYG00000016124	pum3	99	54.932	Pundamilia_nyererei
ENSOCUG00000004189	-	89	65.862	ENSPNAG00000026524	pum3	84	68.311	Pygocentrus_nattereri
ENSOCUG00000004189	-	100	86.090	ENSRNOG00000012574	Pum3	100	86.090	Rattus_norvegicus
ENSOCUG00000004189	-	100	86.090	ENSRNOG00000048356	RGD1308750	100	86.090	Rattus_norvegicus
ENSOCUG00000004189	-	100	90.726	ENSRBIG00000036924	PUM3	100	90.726	Rhinopithecus_bieti
ENSOCUG00000004189	-	100	90.881	ENSRROG00000041089	PUM3	100	90.881	Rhinopithecus_roxellana
ENSOCUG00000004189	-	100	91.345	ENSSBOG00000028066	PUM3	100	91.345	Saimiri_boliviensis_boliviensis
ENSOCUG00000004189	-	100	77.147	ENSSHAG00000003730	PUM3	100	77.147	Sarcophilus_harrisii
ENSOCUG00000004189	-	92	66.447	ENSSFOG00015018778	pum3	95	66.447	Scleropages_formosus
ENSOCUG00000004189	-	82	61.466	ENSSMAG00000013236	pum3	99	55.093	Scophthalmus_maximus
ENSOCUG00000004189	-	92	57.166	ENSSDUG00000001887	pum3	99	54.230	Seriola_dumerili
ENSOCUG00000004189	-	89	57.956	ENSSLDG00000015766	pum3	99	54.135	Seriola_lalandi_dorsalis
ENSOCUG00000004189	-	96	86.268	ENSSARG00000000579	PUM3	100	86.268	Sorex_araneus
ENSOCUG00000004189	-	97	69.968	ENSSPUG00000001707	PUM3	100	69.243	Sphenodon_punctatus
ENSOCUG00000004189	-	83	60.561	ENSSPAG00000003976	pum3	82	60.531	Stegastes_partitus
ENSOCUG00000004189	-	100	90.572	ENSSSCG00000005227	PUM3	99	90.826	Sus_scrofa
ENSOCUG00000004189	-	100	71.252	ENSTGUG00000005339	PUM3	100	71.252	Taeniopygia_guttata
ENSOCUG00000004189	-	98	55.606	ENSTRUG00000004074	pum3	79	62.141	Takifugu_rubripes
ENSOCUG00000004189	-	89	58.793	ENSTNIG00000010325	pum3	98	57.655	Tetraodon_nigroviridis
ENSOCUG00000004189	-	86	71.095	ENSTBEG00000013058	PUM3	86	71.095	Tupaia_belangeri
ENSOCUG00000004189	-	100	82.535	ENSTTRG00000001062	PUM3	96	82.535	Tursiops_truncatus
ENSOCUG00000004189	-	100	82.844	ENSUMAG00000018443	PUM3	99	86.338	Ursus_maritimus
ENSOCUG00000004189	-	100	89.660	ENSVPAG00000010766	PUM3	99	89.660	Vicugna_pacos
ENSOCUG00000004189	-	100	90.572	ENSVVUG00000006527	PUM3	99	90.572	Vulpes_vulpes
ENSOCUG00000004189	-	99	58.860	ENSXETG00000011707	pum3	99	58.860	Xenopus_tropicalis
ENSOCUG00000004189	-	92	54.063	ENSXCOG00000006725	pum3	87	57.252	Xiphophorus_couchianus
ENSOCUG00000004189	-	97	54.028	ENSXMAG00000002926	pum3	82	59.160	Xiphophorus_maculatus