EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004304 (Gene tree)
Gene ID: 100349279
Gene Symbol: DDX42
Alias: -
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 35764 bases
Position: chr19:48635265-48671028
Accession: 100349279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003725	ResIII	PF04851.15	5.3e-07	1	1
ENSOCUP00000003725	DEAD	PF00270.29	5.7e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004309	DDX42-201	3160	XM_008271700	ENSOCUP00000003725	1016 (aa)	XP_008269922	G1SLI8

Gene Model

Click here to download ENSOCUG00000004304's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004304	DDX42	55	37.739	ENSOCUG00000026305	DDX5	84	39.575

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004304	DDX42	89	94.923	ENSG00000198231	DDX42	100	98.077	Homo_sapiens
ENSOCUG00000004304	DDX42	83	75.701	ENSAPOG00000017675	ddx42	97	73.141	Acanthochromis_polyacanthus
ENSOCUG00000004304	DDX42	88	96.300	ENSAMEG00000003200	DDX42	95	96.300	Ailuropoda_melanoleuca
ENSOCUG00000004304	DDX42	68	77.312	ENSACIG00000007376	ddx42	94	73.803	Amphilophus_citrinellus
ENSOCUG00000004304	DDX42	83	75.846	ENSAOCG00000003520	ddx42	94	73.230	Amphiprion_ocellaris
ENSOCUG00000004304	DDX42	85	74.514	ENSAPEG00000000984	ddx42	99	72.717	Amphiprion_percula
ENSOCUG00000004304	DDX42	85	73.858	ENSATEG00000022920	ddx42	95	73.637	Anabas_testudineus
ENSOCUG00000004304	DDX42	87	86.369	ENSAPLG00000010544	DDX42	97	84.457	Anas_platyrhynchos
ENSOCUG00000004304	DDX42	88	84.768	ENSACAG00000003994	DDX42	95	85.969	Anolis_carolinensis
ENSOCUG00000004304	DDX42	88	96.409	ENSANAG00000035693	DDX42	99	96.875	Aotus_nancymaae
ENSOCUG00000004304	DDX42	82	76.703	ENSACLG00000025113	ddx42	99	72.747	Astatotilapia_calliptera
ENSOCUG00000004304	DDX42	74	79.947	ENSAMXG00000011435	ddx42	96	72.406	Astyanax_mexicanus
ENSOCUG00000004304	DDX42	88	93.645	ENSBTAG00000021058	DDX42	97	96.254	Bos_taurus
ENSOCUG00000004304	DDX42	58	52.830	WBGene00008119	C46F11.4	78	53.052	Caenorhabditis_elegans
ENSOCUG00000004304	DDX42	88	96.184	ENSCJAG00000019649	DDX42	99	98.170	Callithrix_jacchus
ENSOCUG00000004304	DDX42	88	95.623	ENSCAFG00000012818	DDX42	95	95.623	Canis_familiaris
ENSOCUG00000004304	DDX42	88	95.735	ENSCAFG00020026631	DDX42	95	95.735	Canis_lupus_dingo
ENSOCUG00000004304	DDX42	88	95.196	ENSCHIG00000014431	DDX42	95	95.307	Capra_hircus
ENSOCUG00000004304	DDX42	88	95.618	ENSTSYG00000001380	DDX42	95	95.404	Carlito_syrichta
ENSOCUG00000004304	DDX42	67	74.742	ENSCAPG00000013621	DDX42	94	74.742	Cavia_aperea
ENSOCUG00000004304	DDX42	88	94.625	ENSCPOG00000005633	DDX42	96	94.513	Cavia_porcellus
ENSOCUG00000004304	DDX42	88	90.348	ENSCCAG00000020612	DDX42	97	96.700	Cebus_capucinus
ENSOCUG00000004304	DDX42	89	94.923	ENSCATG00000030490	DDX42	97	94.923	Cercocebus_atys
ENSOCUG00000004304	DDX42	88	95.179	ENSCLAG00000003497	DDX42	95	95.179	Chinchilla_lanigera
ENSOCUG00000004304	DDX42	89	91.218	ENSCSAG00000003914	DDX42	96	91.218	Chlorocebus_sabaeus
ENSOCUG00000004304	DDX42	68	94.643	ENSCHOG00000006241	DDX42	74	94.643	Choloepus_hoffmanni
ENSOCUG00000004304	DDX42	87	85.825	ENSCPBG00000026682	DDX42	93	86.577	Chrysemys_picta_bellii
ENSOCUG00000004304	DDX42	89	95.033	ENSCANG00000034663	DDX42	99	96.839	Colobus_angolensis_palliatus
ENSOCUG00000004304	DDX42	88	94.826	ENSCGRG00001009775	Ddx42	95	94.938	Cricetulus_griseus_chok1gshd
ENSOCUG00000004304	DDX42	88	94.826	ENSCGRG00000011718	Ddx42	95	94.938	Cricetulus_griseus_crigri
ENSOCUG00000004304	DDX42	83	73.770	ENSCSEG00000021574	ddx42	94	70.889	Cynoglossus_semilaevis
ENSOCUG00000004304	DDX42	82	74.289	ENSCVAG00000011404	ddx42	95	72.575	Cyprinodon_variegatus
ENSOCUG00000004304	DDX42	88	71.632	ENSDARG00000037928	ddx42	99	72.470	Danio_rerio
ENSOCUG00000004304	DDX42	88	89.910	ENSDNOG00000007961	DDX42	96	89.910	Dasypus_novemcinctus
ENSOCUG00000004304	DDX42	88	86.927	ENSDORG00000004199	Ddx42	95	86.592	Dipodomys_ordii
ENSOCUG00000004304	DDX42	60	60.645	FBgn0036104	CG6418	87	56.340	Drosophila_melanogaster
ENSOCUG00000004304	DDX42	73	73.475	ENSEBUG00000001155	ddx42	91	73.342	Eptatretus_burgeri
ENSOCUG00000004304	DDX42	88	96.521	ENSEASG00005013089	DDX42	99	97.143	Equus_asinus_asinus
ENSOCUG00000004304	DDX42	88	96.296	ENSECAG00000022684	DDX42	95	96.296	Equus_caballus
ENSOCUG00000004304	DDX42	54	97.297	ENSEEUG00000009144	DDX42	74	97.297	Erinaceus_europaeus
ENSOCUG00000004304	DDX42	86	71.605	ENSELUG00000020593	ddx42	95	71.287	Esox_lucius
ENSOCUG00000004304	DDX42	88	96.521	ENSFCAG00000003499	DDX42	95	96.521	Felis_catus
ENSOCUG00000004304	DDX42	87	85.023	ENSFALG00000004675	DDX42	72	90.134	Ficedula_albicollis
ENSOCUG00000004304	DDX42	91	92.516	ENSFDAG00000020516	DDX42	98	92.516	Fukomys_damarensis
ENSOCUG00000004304	DDX42	85	72.362	ENSFHEG00000023290	ddx42	95	71.889	Fundulus_heteroclitus
ENSOCUG00000004304	DDX42	69	77.856	ENSGMOG00000004595	ddx42	79	77.856	Gadus_morhua
ENSOCUG00000004304	DDX42	88	83.892	ENSGALG00000000581	DDX42	97	83.173	Gallus_gallus
ENSOCUG00000004304	DDX42	82	74.496	ENSGAFG00000011846	ddx42	95	73.030	Gambusia_affinis
ENSOCUG00000004304	DDX42	83	70.473	ENSGACG00000009782	ddx42	98	69.615	Gasterosteus_aculeatus
ENSOCUG00000004304	DDX42	87	86.681	ENSGAGG00000024411	DDX42	94	86.222	Gopherus_agassizii
ENSOCUG00000004304	DDX42	89	94.812	ENSGGOG00000006779	DDX42	97	96.839	Gorilla_gorilla
ENSOCUG00000004304	DDX42	82	76.941	ENSHBUG00000008705	ddx42	99	72.964	Haplochromis_burtoni
ENSOCUG00000004304	DDX42	88	90.236	ENSHGLG00000010024	DDX42	95	90.236	Heterocephalus_glaber_female
ENSOCUG00000004304	DDX42	88	95.286	ENSHGLG00100004479	-	95	95.286	Heterocephalus_glaber_male
ENSOCUG00000004304	DDX42	82	72.957	ENSHGLG00100007138	-	90	72.957	Heterocephalus_glaber_male
ENSOCUG00000004304	DDX42	77	77.834	ENSHCOG00000003357	ddx42	95	76.024	Hippocampus_comes
ENSOCUG00000004304	DDX42	74	79.789	ENSIPUG00000013327	ddx42	95	71.987	Ictalurus_punctatus
ENSOCUG00000004304	DDX42	88	95.969	ENSSTOG00000008922	DDX42	95	95.969	Ictidomys_tridecemlineatus
ENSOCUG00000004304	DDX42	88	94.955	ENSJJAG00000011727	Ddx42	96	94.955	Jaculus_jaculus
ENSOCUG00000004304	DDX42	77	79.061	ENSKMAG00000009914	ddx42	96	73.884	Kryptolebias_marmoratus
ENSOCUG00000004304	DDX42	75	76.234	ENSLBEG00000004687	ddx42	95	67.398	Labrus_bergylta
ENSOCUG00000004304	DDX42	87	78.217	ENSLACG00000013476	DDX42	95	79.106	Latimeria_chalumnae
ENSOCUG00000004304	DDX42	87	76.464	ENSLOCG00000011764	ddx42	95	76.464	Lepisosteus_oculatus
ENSOCUG00000004304	DDX42	88	95.613	ENSLAFG00000003249	DDX42	95	95.398	Loxodonta_africana
ENSOCUG00000004304	DDX42	89	94.923	ENSMFAG00000031356	DDX42	97	94.923	Macaca_fascicularis
ENSOCUG00000004304	DDX42	88	95.960	ENSMMUG00000016762	DDX42	96	96.844	Macaca_mulatta
ENSOCUG00000004304	DDX42	89	94.923	ENSMNEG00000038250	DDX42	97	94.923	Macaca_nemestrina
ENSOCUG00000004304	DDX42	89	95.033	ENSMLEG00000043080	DDX42	96	95.033	Mandrillus_leucophaeus
ENSOCUG00000004304	DDX42	85	75.029	ENSMAMG00000021888	ddx42	92	73.889	Mastacembelus_armatus
ENSOCUG00000004304	DDX42	82	76.703	ENSMZEG00005023103	ddx42	99	72.747	Maylandia_zebra
ENSOCUG00000004304	DDX42	88	84.432	ENSMGAG00000001822	DDX42	97	83.013	Meleagris_gallopavo
ENSOCUG00000004304	DDX42	69	96.449	ENSMAUG00000020774	-	94	96.449	Mesocricetus_auratus
ENSOCUG00000004304	DDX42	88	96.296	ENSMICG00000009952	DDX42	95	95.735	Microcebus_murinus
ENSOCUG00000004304	DDX42	88	94.151	ENSMOCG00000015504	Ddx42	95	94.263	Microtus_ochrogaster
ENSOCUG00000004304	DDX42	82	72.024	ENSMMOG00000016963	ddx42	86	70.723	Mola_mola
ENSOCUG00000004304	DDX42	85	74.654	ENSMALG00000007800	ddx42	95	73.772	Monopterus_albus
ENSOCUG00000004304	DDX42	88	95.388	MGP_CAROLIEiJ_G0017314	Ddx42	95	95.501	Mus_caroli
ENSOCUG00000004304	DDX42	88	95.276	ENSMUSG00000020705	Ddx42	95	95.388	Mus_musculus
ENSOCUG00000004304	DDX42	67	99.263	MGP_PahariEiJ_G0018444	-	96	99.263	Mus_pahari
ENSOCUG00000004304	DDX42	88	95.276	MGP_SPRETEiJ_G0018158	Ddx42	95	95.388	Mus_spretus
ENSOCUG00000004304	DDX42	88	95.764	ENSMPUG00000014921	DDX42	95	95.764	Mustela_putorius_furo
ENSOCUG00000004304	DDX42	88	93.577	ENSMLUG00000011645	DDX42	95	94.475	Myotis_lucifugus
ENSOCUG00000004304	DDX42	88	95.618	ENSNGAG00000021897	Ddx42	96	95.618	Nannospalax_galili
ENSOCUG00000004304	DDX42	82	75.269	ENSNBRG00000004466	ddx42	99	71.444	Neolamprologus_brichardi
ENSOCUG00000004304	DDX42	88	96.409	ENSNLEG00000004248	DDX42	99	96.983	Nomascus_leucogenys
ENSOCUG00000004304	DDX42	63	82.616	ENSMEUG00000013227	-	79	82.616	Notamacropus_eugenii
ENSOCUG00000004304	DDX42	88	95.735	ENSOPRG00000014960	DDX42	95	95.735	Ochotona_princeps
ENSOCUG00000004304	DDX42	88	91.368	ENSODEG00000007810	DDX42	95	90.817	Octodon_degus
ENSOCUG00000004304	DDX42	82	76.822	ENSONIG00000000734	ddx42	99	72.343	Oreochromis_niloticus
ENSOCUG00000004304	DDX42	53	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSOCUG00000004304	DDX42	87	70.833	ENSORLG00000002395	ddx42	95	70.523	Oryzias_latipes
ENSOCUG00000004304	DDX42	87	71.194	ENSORLG00020011621	ddx42	95	73.051	Oryzias_latipes_hni
ENSOCUG00000004304	DDX42	87	71.194	ENSORLG00015004487	ddx42	95	72.829	Oryzias_latipes_hsok
ENSOCUG00000004304	DDX42	73	82.024	ENSOMEG00000020093	ddx42	96	72.210	Oryzias_melastigma
ENSOCUG00000004304	DDX42	88	96.296	ENSOGAG00000006872	DDX42	95	96.296	Otolemur_garnettii
ENSOCUG00000004304	DDX42	88	94.463	ENSOARG00000013540	DDX42	95	95.017	Ovis_aries
ENSOCUG00000004304	DDX42	89	95.033	ENSPPAG00000007496	DDX42	97	96.961	Pan_paniscus
ENSOCUG00000004304	DDX42	88	96.296	ENSPPRG00000002740	DDX42	95	96.296	Panthera_pardus
ENSOCUG00000004304	DDX42	88	96.521	ENSPTIG00000009932	DDX42	95	96.521	Panthera_tigris_altaica
ENSOCUG00000004304	DDX42	89	95.033	ENSPTRG00000009523	DDX42	97	96.961	Pan_troglodytes
ENSOCUG00000004304	DDX42	89	94.923	ENSPANG00000020990	DDX42	97	94.923	Papio_anubis
ENSOCUG00000004304	DDX42	79	91.801	ENSPSIG00000010289	DDX42	98	91.502	Pelodiscus_sinensis
ENSOCUG00000004304	DDX42	83	71.901	ENSPMGG00000009323	ddx42	98	69.967	Periophthalmus_magnuspinnatus
ENSOCUG00000004304	DDX42	89	94.013	ENSPEMG00000006755	Ddx42	96	94.124	Peromyscus_maniculatus_bairdii
ENSOCUG00000004304	DDX42	73	72.477	ENSPMAG00000005580	ddx42	100	72.608	Petromyzon_marinus
ENSOCUG00000004304	DDX42	88	92.609	ENSPCIG00000009093	DDX42	94	92.385	Phascolarctos_cinereus
ENSOCUG00000004304	DDX42	82	75.326	ENSPFOG00000014104	ddx42	93	73.252	Poecilia_formosa
ENSOCUG00000004304	DDX42	82	75.326	ENSPLAG00000010522	ddx42	93	73.252	Poecilia_latipinna
ENSOCUG00000004304	DDX42	82	75.208	ENSPMEG00000010744	ddx42	92	73.141	Poecilia_mexicana
ENSOCUG00000004304	DDX42	82	74.852	ENSPREG00000009926	ddx42	91	72.919	Poecilia_reticulata
ENSOCUG00000004304	DDX42	89	92.952	ENSPPYG00000008531	DDX42	96	93.046	Pongo_abelii
ENSOCUG00000004304	DDX42	80	89.939	ENSPCAG00000002474	DDX42	95	89.718	Procavia_capensis
ENSOCUG00000004304	DDX42	88	85.939	ENSPCOG00000001559	DDX42	97	88.643	Propithecus_coquereli
ENSOCUG00000004304	DDX42	88	91.798	ENSPVAG00000000160	DDX42	95	91.704	Pteropus_vampyrus
ENSOCUG00000004304	DDX42	68	74.640	ENSPNYG00000013954	ddx42	95	70.142	Pundamilia_nyererei
ENSOCUG00000004304	DDX42	71	80.654	ENSPNAG00000017352	ddx42	97	72.289	Pygocentrus_nattereri
ENSOCUG00000004304	DDX42	88	95.163	ENSRNOG00000009474	Ddx42	95	95.276	Rattus_norvegicus
ENSOCUG00000004304	DDX42	89	94.812	ENSRBIG00000004781	DDX42	99	96.695	Rhinopithecus_bieti
ENSOCUG00000004304	DDX42	89	94.923	ENSRROG00000029794	DDX42	97	94.923	Rhinopithecus_roxellana
ENSOCUG00000004304	DDX42	88	96.296	ENSSBOG00000029624	DDX42	97	96.983	Saimiri_boliviensis_boliviensis
ENSOCUG00000004304	DDX42	61	63.344	ENSSHAG00000007919	-	91	61.367	Sarcophilus_harrisii
ENSOCUG00000004304	DDX42	88	92.945	ENSSHAG00000012896	-	94	92.721	Sarcophilus_harrisii
ENSOCUG00000004304	DDX42	75	81.890	ENSSFOG00015014064	ddx42	82	81.890	Scleropages_formosus
ENSOCUG00000004304	DDX42	82	75.238	ENSSMAG00000009077	ddx42	94	73.014	Scophthalmus_maximus
ENSOCUG00000004304	DDX42	86	73.791	ENSSDUG00000022221	ddx42	95	73.667	Seriola_dumerili
ENSOCUG00000004304	DDX42	86	73.439	ENSSLDG00000018483	ddx42	95	72.982	Seriola_lalandi_dorsalis
ENSOCUG00000004304	DDX42	88	95.388	ENSSARG00000009847	DDX42	95	95.174	Sorex_araneus
ENSOCUG00000004304	DDX42	87	86.976	ENSSPUG00000018806	DDX42	96	85.278	Sphenodon_punctatus
ENSOCUG00000004304	DDX42	83	75.818	ENSSPAG00000013055	ddx42	95	73.200	Stegastes_partitus
ENSOCUG00000004304	DDX42	75	94.785	ENSSSCG00000017289	DDX42	92	95.437	Sus_scrofa
ENSOCUG00000004304	DDX42	88	84.775	ENSTGUG00000001931	DDX42	97	84.775	Taeniopygia_guttata
ENSOCUG00000004304	DDX42	83	73.770	ENSTRUG00000010711	ddx42	99	80.889	Takifugu_rubripes
ENSOCUG00000004304	DDX42	74	93.783	ENSTBEG00000010159	DDX42	99	93.783	Tupaia_belangeri
ENSOCUG00000004304	DDX42	88	96.180	ENSTTRG00000006962	DDX42	95	96.180	Tursiops_truncatus
ENSOCUG00000004304	DDX42	88	96.188	ENSUAMG00000007321	DDX42	95	96.188	Ursus_americanus
ENSOCUG00000004304	DDX42	88	95.955	ENSUMAG00000017438	DDX42	96	95.740	Ursus_maritimus
ENSOCUG00000004304	DDX42	88	86.420	ENSVPAG00000009633	DDX42	95	86.420	Vicugna_pacos
ENSOCUG00000004304	DDX42	88	95.960	ENSVVUG00000006095	DDX42	95	95.960	Vulpes_vulpes
ENSOCUG00000004304	DDX42	88	79.083	ENSXETG00000003245	ddx42	92	78.412	Xenopus_tropicalis
ENSOCUG00000004304	DDX42	71	74.345	ENSXCOG00000017560	ddx42	92	72.715	Xiphophorus_couchianus
ENSOCUG00000004304	DDX42	85	74.253	ENSXMAG00000008138	ddx42	95	73.111	Xiphophorus_maculatus