EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004312 (Gene tree)
Gene ID: 100343134
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 9343 bases
Position: chr7:172929143-172938485
Accession: 100343134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021169	RRM_1	PF00076.22	1.1e-57	1	4
ENSOCUP00000021169	RRM_1	PF00076.22	1.1e-57	2	4
ENSOCUP00000021169	RRM_1	PF00076.22	1.1e-57	3	4
ENSOCUP00000021169	RRM_1	PF00076.22	1.1e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004315	NCL-201	2176	XM_008259305	ENSOCUP00000021169	654 (aa)	-	G1TVT0

Gene Model

Click here to download ENSOCUG00000004312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004312	NCL	52	31.111	ENSOCUG00000011204	TIA1	74	31.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004312	NCL	52	86.909	ENSG00000115053	NCL	96	86.909	Homo_sapiens
ENSOCUG00000004312	NCL	100	68.991	ENSANAG00000024378	-	98	68.182	Aotus_nancymaae
ENSOCUG00000004312	NCL	69	88.285	ENSBTAG00000026909	-	83	88.285	Bos_taurus
ENSOCUG00000004312	NCL	100	87.459	ENSBTAG00000050728	-	82	89.300	Bos_taurus
ENSOCUG00000004312	NCL	98	79.468	ENSBTAG00000051320	-	75	85.915	Bos_taurus
ENSOCUG00000004312	NCL	100	79.609	ENSCAFG00000011037	NCL	92	79.421	Canis_familiaris
ENSOCUG00000004312	NCL	92	78.582	ENSCAFG00020023145	NCL	87	78.983	Canis_lupus_dingo
ENSOCUG00000004312	NCL	91	71.210	ENSCHIG00000026149	-	54	86.579	Capra_hircus
ENSOCUG00000004312	NCL	67	90.888	ENSCHIG00000021052	-	92	93.007	Capra_hircus
ENSOCUG00000004312	NCL	85	86.310	ENSCHIG00000010894	-	83	94.545	Capra_hircus
ENSOCUG00000004312	NCL	84	73.333	ENSCHIG00000012143	-	92	61.364	Capra_hircus
ENSOCUG00000004312	NCL	91	78.354	ENSTSYG00000004355	-	92	78.963	Carlito_syrichta
ENSOCUG00000004312	NCL	93	76.460	ENSTSYG00000029779	-	98	74.914	Carlito_syrichta
ENSOCUG00000004312	NCL	89	70.305	ENSTSYG00000036886	-	91	70.031	Carlito_syrichta
ENSOCUG00000004312	NCL	67	92.711	ENSCCAG00000021040	-	54	94.474	Cebus_capucinus
ENSOCUG00000004312	NCL	86	83.920	ENSCCAG00000000551	-	97	84.080	Cebus_capucinus
ENSOCUG00000004312	NCL	100	81.039	ENSCATG00000037033	NCL	92	77.727	Cercocebus_atys
ENSOCUG00000004312	NCL	100	78.243	ENSCLAG00000013080	NCL	92	76.256	Chinchilla_lanigera
ENSOCUG00000004312	NCL	68	94.595	ENSCSAG00000006660	NCL	96	94.595	Chlorocebus_sabaeus
ENSOCUG00000004312	NCL	61	72.471	ENSCHOG00000012860	NCL	78	77.573	Choloepus_hoffmanni
ENSOCUG00000004312	NCL	59	90.464	ENSCANG00000036756	NCL	93	95.455	Colobus_angolensis_palliatus
ENSOCUG00000004312	NCL	91	64.557	ENSCGRG00001022350	-	95	63.307	Cricetulus_griseus_chok1gshd
ENSOCUG00000004312	NCL	91	73.466	ENSCGRG00001024315	-	91	74.080	Cricetulus_griseus_chok1gshd
ENSOCUG00000004312	NCL	91	65.440	ENSCGRG00000000507	-	93	63.826	Cricetulus_griseus_crigri
ENSOCUG00000004312	NCL	86	72.089	ENSCGRG00000017894	-	90	72.727	Cricetulus_griseus_crigri
ENSOCUG00000004312	NCL	100	77.203	ENSDNOG00000010783	-	92	77.405	Dasypus_novemcinctus
ENSOCUG00000004312	NCL	100	71.019	ENSDNOG00000046347	-	99	68.723	Dasypus_novemcinctus
ENSOCUG00000004312	NCL	89	55.426	ENSETEG00000008139	-	99	53.400	Echinops_telfairi
ENSOCUG00000004312	NCL	73	89.710	ENSETEG00000018937	-	85	74.669	Echinops_telfairi
ENSOCUG00000004312	NCL	57	89.125	ENSETEG00000014756	-	86	89.182	Echinops_telfairi
ENSOCUG00000004312	NCL	67	60.135	ENSETEG00000008553	-	80	62.797	Echinops_telfairi
ENSOCUG00000004312	NCL	98	80.000	ENSEASG00005008488	NCL	95	94.286	Equus_asinus_asinus
ENSOCUG00000004312	NCL	100	79.916	ENSFCAG00000027622	NCL	92	79.148	Felis_catus
ENSOCUG00000004312	NCL	99	79.802	ENSFDAG00000014291	NCL	92	78.241	Fukomys_damarensis
ENSOCUG00000004312	NCL	64	95.714	ENSGGOG00000004300	NCL	100	89.902	Gorilla_gorilla
ENSOCUG00000004312	NCL	91	75.728	ENSHGLG00000011069	-	92	75.806	Heterocephalus_glaber_female
ENSOCUG00000004312	NCL	66	81.364	ENSHGLG00000005133	-	100	72.727	Heterocephalus_glaber_female
ENSOCUG00000004312	NCL	91	74.043	ENSHGLG00100000745	-	92	74.129	Heterocephalus_glaber_male
ENSOCUG00000004312	NCL	67	77.169	ENSJJAG00000016165	Ncl	93	68.203	Jaculus_jaculus
ENSOCUG00000004312	NCL	91	74.400	ENSLAFG00000013061	NCL	91	73.003	Loxodonta_africana
ENSOCUG00000004312	NCL	100	80.926	ENSMMUG00000018094	NCL	95	95.714	Macaca_mulatta
ENSOCUG00000004312	NCL	100	82.609	ENSMNEG00000023839	NCL	95	95.714	Macaca_nemestrina
ENSOCUG00000004312	NCL	100	81.039	ENSMLEG00000028935	NCL	92	77.727	Mandrillus_leucophaeus
ENSOCUG00000004312	NCL	91	66.188	ENSMICG00000029975	-	91	76.863	Microcebus_murinus
ENSOCUG00000004312	NCL	100	79.383	ENSMICG00000002538	-	92	76.534	Microcebus_murinus
ENSOCUG00000004312	NCL	100	73.699	MGP_CAROLIEiJ_G0014362	Ncl	92	71.889	Mus_caroli
ENSOCUG00000004312	NCL	100	73.174	ENSMUSG00000026234	Ncl	92	71.319	Mus_musculus
ENSOCUG00000004312	NCL	91	70.968	MGP_PahariEiJ_G0027599	Ncl	92	71.736	Mus_pahari
ENSOCUG00000004312	NCL	100	72.612	MGP_SPRETEiJ_G0015164	Ncl	92	71.319	Mus_spretus
ENSOCUG00000004312	NCL	91	73.404	ENSNGAG00000002454	-	91	71.277	Nannospalax_galili
ENSOCUG00000004312	NCL	63	76.842	ENSNLEG00000014107	-	95	67.778	Nomascus_leucogenys
ENSOCUG00000004312	NCL	91	74.920	ENSODEG00000002748	-	91	74.404	Octodon_degus
ENSOCUG00000004312	NCL	93	74.662	ENSODEG00000002441	-	95	67.472	Octodon_degus
ENSOCUG00000004312	NCL	91	65.484	ENSOGAG00000027852	NCL	91	64.032	Otolemur_garnettii
ENSOCUG00000004312	NCL	62	84.028	ENSOARG00000013710	-	94	72.603	Ovis_aries
ENSOCUG00000004312	NCL	60	76.336	ENSOARG00000004072	-	91	63.009	Ovis_aries
ENSOCUG00000004312	NCL	64	95.714	ENSPPAG00000011619	NCL	100	89.902	Pan_paniscus
ENSOCUG00000004312	NCL	100	80.028	ENSPPRG00000012603	NCL	92	79.116	Panthera_pardus
ENSOCUG00000004312	NCL	99	79.718	ENSPTIG00000010393	NCL	91	78.769	Panthera_tigris_altaica
ENSOCUG00000004312	NCL	100	80.392	ENSPTRG00000013025	NCL	100	90.228	Pan_troglodytes
ENSOCUG00000004312	NCL	93	83.217	ENSPPYG00000013265	NCL	83	84.115	Pongo_abelii
ENSOCUG00000004312	NCL	79	88.095	ENSPCOG00000004160	-	88	88.360	Propithecus_coquereli
ENSOCUG00000004312	NCL	91	78.746	ENSPCOG00000003051	-	91	77.029	Propithecus_coquereli
ENSOCUG00000004312	NCL	100	80.169	ENSPVAG00000000297	NCL	92	79.109	Pteropus_vampyrus
ENSOCUG00000004312	NCL	91	71.908	ENSRNOG00000018273	Ncl	92	73.130	Rattus_norvegicus
ENSOCUG00000004312	NCL	69	94.118	ENSRBIG00000035396	-	93	92.282	Rhinopithecus_bieti
ENSOCUG00000004312	NCL	91	78.867	ENSRROG00000028756	-	85	94.545	Rhinopithecus_roxellana
ENSOCUG00000004312	NCL	99	75.387	ENSRROG00000036103	-	89	92.515	Rhinopithecus_roxellana
ENSOCUG00000004312	NCL	70	72.018	ENSSBOG00000023094	-	92	72.273	Saimiri_boliviensis_boliviensis
ENSOCUG00000004312	NCL	79	87.472	ENSSBOG00000027549	-	100	70.909	Saimiri_boliviensis_boliviensis
ENSOCUG00000004312	NCL	80	94.723	ENSSSCG00000016275	NCL	82	94.737	Sus_scrofa
ENSOCUG00000004312	NCL	77	82.586	ENSTBEG00000001546	-	85	71.570	Tupaia_belangeri
ENSOCUG00000004312	NCL	80	75.306	ENSTBEG00000002469	-	66	79.943	Tupaia_belangeri
ENSOCUG00000004312	NCL	91	78.648	ENSTTRG00000009094	NCL	91	77.727	Tursiops_truncatus
ENSOCUG00000004312	NCL	67	95.216	ENSUAMG00000005639	NCL	87	95.227	Ursus_americanus
ENSOCUG00000004312	NCL	75	80.580	ENSVPAG00000001796	NCL	69	80.580	Vicugna_pacos
ENSOCUG00000004312	NCL	100	83.431	ENSVVUG00000025564	NCL	100	84.751	Vulpes_vulpes