EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004325 (Gene tree)
Gene ID: 100356798
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 47925 bases
Position: chr6:15384668-15432592
Accession: 100356798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003739	Ago_hook	PF10427.9	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004327	TNRC6A-201	8940	XM_008257893	ENSOCUP00000003739	1852 (aa)	-	G1SLK0

Gene Model

Click here to download ENSOCUG00000004325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004325	TNRC6A	99	35.038	ENSOCUG00000016128	TNRC6B	96	36.639
ENSOCUG00000004325	TNRC6A	78	42.759	ENSOCUG00000006122	TNRC6C	94	36.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004325	TNRC6A	100	92.981	ENSG00000090905	TNRC6A	100	93.168	Homo_sapiens
ENSOCUG00000004325	TNRC6A	100	92.816	ENSAMEG00000009333	TNRC6A	99	92.921	Ailuropoda_melanoleuca
ENSOCUG00000004325	TNRC6A	100	81.270	ENSAPLG00000009978	TNRC6A	100	81.270	Anas_platyrhynchos
ENSOCUG00000004325	TNRC6A	98	54.763	ENSACAG00000011857	TNRC6A	97	55.607	Anolis_carolinensis
ENSOCUG00000004325	TNRC6A	100	93.067	ENSANAG00000025252	TNRC6A	98	93.105	Aotus_nancymaae
ENSOCUG00000004325	TNRC6A	94	55.087	ENSAMXG00000019919	tnrc6a	100	54.822	Astyanax_mexicanus
ENSOCUG00000004325	TNRC6A	100	92.053	ENSBTAG00000017999	TNRC6A	99	91.684	Bos_taurus
ENSOCUG00000004325	TNRC6A	100	92.533	ENSCJAG00000020677	TNRC6A	97	92.585	Callithrix_jacchus
ENSOCUG00000004325	TNRC6A	100	92.812	ENSCAFG00000017531	TNRC6A	97	92.917	Canis_familiaris
ENSOCUG00000004325	TNRC6A	100	91.710	ENSCAFG00020021160	TNRC6A	99	91.763	Canis_lupus_dingo
ENSOCUG00000004325	TNRC6A	100	89.316	ENSCHIG00000019448	TNRC6A	99	88.947	Capra_hircus
ENSOCUG00000004325	TNRC6A	100	93.386	ENSTSYG00000012711	TNRC6A	99	93.386	Carlito_syrichta
ENSOCUG00000004325	TNRC6A	100	90.660	ENSCPOG00000036684	TNRC6A	97	90.818	Cavia_porcellus
ENSOCUG00000004325	TNRC6A	100	93.127	ENSCCAG00000033664	TNRC6A	99	93.127	Cebus_capucinus
ENSOCUG00000004325	TNRC6A	100	91.680	ENSCATG00000019284	TNRC6A	97	91.732	Cercocebus_atys
ENSOCUG00000004325	TNRC6A	100	85.669	ENSCLAG00000010217	TNRC6A	97	85.879	Chinchilla_lanigera
ENSOCUG00000004325	TNRC6A	100	93.131	ENSCSAG00000006561	TNRC6A	97	93.183	Chlorocebus_sabaeus
ENSOCUG00000004325	TNRC6A	95	90.816	ENSCHOG00000009374	TNRC6A	92	90.816	Choloepus_hoffmanni
ENSOCUG00000004325	TNRC6A	94	77.890	ENSCPBG00000001881	TNRC6A	99	77.946	Chrysemys_picta_bellii
ENSOCUG00000004325	TNRC6A	100	93.228	ENSCANG00000041549	TNRC6A	97	93.333	Colobus_angolensis_palliatus
ENSOCUG00000004325	TNRC6A	100	91.478	ENSCGRG00001015021	Tnrc6a	99	91.689	Cricetulus_griseus_chok1gshd
ENSOCUG00000004325	TNRC6A	100	88.282	ENSCGRG00000013351	Tnrc6a	97	88.492	Cricetulus_griseus_crigri
ENSOCUG00000004325	TNRC6A	94	55.653	ENSDARG00000079688	tnrc6a	99	55.519	Danio_rerio
ENSOCUG00000004325	TNRC6A	100	91.715	ENSDNOG00000013989	TNRC6A	99	91.715	Dasypus_novemcinctus
ENSOCUG00000004325	TNRC6A	100	82.412	ENSETEG00000014658	TNRC6A	99	82.464	Echinops_telfairi
ENSOCUG00000004325	TNRC6A	100	92.628	ENSEASG00005017693	TNRC6A	99	92.733	Equus_asinus_asinus
ENSOCUG00000004325	TNRC6A	100	92.628	ENSECAG00000025056	TNRC6A	99	92.733	Equus_caballus
ENSOCUG00000004325	TNRC6A	100	86.283	ENSEEUG00000004530	TNRC6A	99	86.283	Erinaceus_europaeus
ENSOCUG00000004325	TNRC6A	100	91.851	ENSFCAG00000025236	TNRC6A	99	91.956	Felis_catus
ENSOCUG00000004325	TNRC6A	100	78.373	ENSFALG00000003757	TNRC6A	97	78.834	Ficedula_albicollis
ENSOCUG00000004325	TNRC6A	94	78.419	ENSGALG00000006068	TNRC6A	99	78.531	Gallus_gallus
ENSOCUG00000004325	TNRC6A	94	77.349	ENSGAGG00000023209	TNRC6A	99	77.629	Gopherus_agassizii
ENSOCUG00000004325	TNRC6A	100	92.771	ENSGGOG00000005137	TNRC6A	99	92.876	Gorilla_gorilla
ENSOCUG00000004325	TNRC6A	99	88.983	ENSHGLG00000012474	-	97	89.035	Heterocephalus_glaber_female
ENSOCUG00000004325	TNRC6A	98	71.382	ENSHGLG00000007368	-	93	71.132	Heterocephalus_glaber_female
ENSOCUG00000004325	TNRC6A	99	89.824	ENSHGLG00100012496	-	97	89.824	Heterocephalus_glaber_male
ENSOCUG00000004325	TNRC6A	100	92.155	ENSSTOG00000023394	TNRC6A	96	92.207	Ictidomys_tridecemlineatus
ENSOCUG00000004325	TNRC6A	100	69.061	ENSLACG00000006277	TNRC6A	100	69.848	Latimeria_chalumnae
ENSOCUG00000004325	TNRC6A	100	82.599	ENSLOCG00000005517	tnrc6a	90	82.599	Lepisosteus_oculatus
ENSOCUG00000004325	TNRC6A	100	89.340	ENSLAFG00000004209	TNRC6A	99	89.499	Loxodonta_africana
ENSOCUG00000004325	TNRC6A	100	91.628	ENSMFAG00000003824	TNRC6A	99	91.680	Macaca_fascicularis
ENSOCUG00000004325	TNRC6A	100	93.018	ENSMMUG00000020428	TNRC6A	97	93.071	Macaca_mulatta
ENSOCUG00000004325	TNRC6A	100	92.637	ENSMNEG00000034854	TNRC6A	99	91.675	Macaca_nemestrina
ENSOCUG00000004325	TNRC6A	100	91.390	ENSMLEG00000042737	TNRC6A	97	91.442	Mandrillus_leucophaeus
ENSOCUG00000004325	TNRC6A	98	80.649	ENSMGAG00000006455	TNRC6A	94	80.616	Meleagris_gallopavo
ENSOCUG00000004325	TNRC6A	100	89.193	ENSMAUG00000012750	Tnrc6a	97	89.352	Mesocricetus_auratus
ENSOCUG00000004325	TNRC6A	100	93.662	ENSMICG00000030685	TNRC6A	98	93.609	Microcebus_murinus
ENSOCUG00000004325	TNRC6A	100	89.340	ENSMOCG00000000152	Tnrc6a	97	89.499	Microtus_ochrogaster
ENSOCUG00000004325	TNRC6A	100	80.747	ENSMODG00000016348	TNRC6A	96	81.111	Monodelphis_domestica
ENSOCUG00000004325	TNRC6A	100	88.472	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.143	Mus_caroli
ENSOCUG00000004325	TNRC6A	100	88.654	ENSMUSG00000052707	Tnrc6a	99	93.571	Mus_musculus
ENSOCUG00000004325	TNRC6A	100	88.924	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.000	Mus_pahari
ENSOCUG00000004325	TNRC6A	100	91.284	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.571	Mus_spretus
ENSOCUG00000004325	TNRC6A	100	81.745	ENSMPUG00000012324	TNRC6A	100	81.692	Mustela_putorius_furo
ENSOCUG00000004325	TNRC6A	100	90.406	ENSMLUG00000002701	TNRC6A	100	90.459	Myotis_lucifugus
ENSOCUG00000004325	TNRC6A	100	90.205	ENSNGAG00000020702	Tnrc6a	97	90.205	Nannospalax_galili
ENSOCUG00000004325	TNRC6A	100	90.633	ENSNLEG00000011851	TNRC6A	98	90.790	Nomascus_leucogenys
ENSOCUG00000004325	TNRC6A	78	88.164	ENSMEUG00000015959	-	74	88.164	Notamacropus_eugenii
ENSOCUG00000004325	TNRC6A	95	98.881	ENSOPRG00000005819	TNRC6A	93	98.881	Ochotona_princeps
ENSOCUG00000004325	TNRC6A	99	85.503	ENSODEG00000012802	TNRC6A	97	85.661	Octodon_degus
ENSOCUG00000004325	TNRC6A	91	80.834	ENSOANG00000007672	TNRC6A	100	80.834	Ornithorhynchus_anatinus
ENSOCUG00000004325	TNRC6A	100	93.740	ENSOGAG00000006666	TNRC6A	98	93.740	Otolemur_garnettii
ENSOCUG00000004325	TNRC6A	100	91.186	ENSOARG00000017950	TNRC6A	98	90.818	Ovis_aries
ENSOCUG00000004325	TNRC6A	100	92.685	ENSPPAG00000028379	TNRC6A	99	92.738	Pan_paniscus
ENSOCUG00000004325	TNRC6A	100	91.851	ENSPPRG00000005861	TNRC6A	97	91.956	Panthera_pardus
ENSOCUG00000004325	TNRC6A	100	91.204	ENSPTIG00000006346	TNRC6A	97	91.309	Panthera_tigris_altaica
ENSOCUG00000004325	TNRC6A	100	92.689	ENSPTRG00000007898	TNRC6A	99	92.742	Pan_troglodytes
ENSOCUG00000004325	TNRC6A	100	90.533	ENSPANG00000018523	TNRC6A	99	89.786	Papio_anubis
ENSOCUG00000004325	TNRC6A	92	71.946	ENSPKIG00000012859	tnrc6a	99	61.339	Paramormyrops_kingsleyae
ENSOCUG00000004325	TNRC6A	82	74.755	ENSPSIG00000003965	TNRC6A	100	74.820	Pelodiscus_sinensis
ENSOCUG00000004325	TNRC6A	100	88.930	ENSPEMG00000016318	Tnrc6a	97	89.088	Peromyscus_maniculatus_bairdii
ENSOCUG00000004325	TNRC6A	100	82.493	ENSPCIG00000012106	TNRC6A	99	82.759	Phascolarctos_cinereus
ENSOCUG00000004325	TNRC6A	100	92.823	ENSPPYG00000007202	TNRC6A	97	92.876	Pongo_abelii
ENSOCUG00000004325	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	91	100.000	Procavia_capensis
ENSOCUG00000004325	TNRC6A	100	91.300	ENSPCOG00000010134	TNRC6A	97	91.300	Propithecus_coquereli
ENSOCUG00000004325	TNRC6A	89	69.702	ENSPVAG00000012066	TNRC6A	97	69.821	Pteropus_vampyrus
ENSOCUG00000004325	TNRC6A	99	90.451	ENSRNOG00000024737	Tnrc6a	97	90.351	Rattus_norvegicus
ENSOCUG00000004325	TNRC6A	100	93.176	ENSRBIG00000014222	TNRC6A	99	93.228	Rhinopithecus_bieti
ENSOCUG00000004325	TNRC6A	100	93.372	ENSRROG00000032360	TNRC6A	97	93.477	Rhinopithecus_roxellana
ENSOCUG00000004325	TNRC6A	100	94.002	ENSSBOG00000036197	TNRC6A	100	94.971	Saimiri_boliviensis_boliviensis
ENSOCUG00000004325	TNRC6A	94	79.446	ENSSHAG00000008811	TNRC6A	99	82.167	Sarcophilus_harrisii
ENSOCUG00000004325	TNRC6A	91	67.115	ENSSFOG00015008920	tnrc6a	99	64.565	Scleropages_formosus
ENSOCUG00000004325	TNRC6A	73	80.072	ENSSARG00000002479	TNRC6A	89	80.435	Sorex_araneus
ENSOCUG00000004325	TNRC6A	94	76.385	ENSSPUG00000010525	TNRC6A	100	76.385	Sphenodon_punctatus
ENSOCUG00000004325	TNRC6A	100	89.540	ENSSSCG00000038870	TNRC6A	100	94.912	Sus_scrofa
ENSOCUG00000004325	TNRC6A	100	76.919	ENSTGUG00000006142	TNRC6A	97	77.290	Taeniopygia_guttata
ENSOCUG00000004325	TNRC6A	100	90.723	ENSTBEG00000014965	TNRC6A	99	90.776	Tupaia_belangeri
ENSOCUG00000004325	TNRC6A	93	95.690	ENSTTRG00000002008	TNRC6A	90	95.690	Tursiops_truncatus
ENSOCUG00000004325	TNRC6A	81	88.983	ENSUAMG00000006656	-	93	89.047	Ursus_americanus
ENSOCUG00000004325	TNRC6A	100	93.245	ENSUMAG00000008274	TNRC6A	100	92.999	Ursus_maritimus
ENSOCUG00000004325	TNRC6A	57	82.965	ENSVPAG00000010764	-	55	82.965	Vicugna_pacos
ENSOCUG00000004325	TNRC6A	95	100.000	ENSVVUG00000005380	TNRC6A	99	92.707	Vulpes_vulpes
ENSOCUG00000004325	TNRC6A	97	64.209	ENSXETG00000030437	TNRC6A	99	64.424	Xenopus_tropicalis