EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004364 (Gene tree)
Gene ID: 100353010
Gene Symbol: -
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 17068 bases
Position: chr5:7562080-7579147
Accession: 100353010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000002590	zf-C2H2	PF00096.26	4.4e-34	1	6
ENSOCUP00000002590	zf-C2H2	PF00096.26	4.4e-34	2	6
ENSOCUP00000002590	zf-C2H2	PF00096.26	4.4e-34	3	6
ENSOCUP00000002590	zf-C2H2	PF00096.26	4.4e-34	4	6
ENSOCUP00000002590	zf-C2H2	PF00096.26	4.4e-34	5	6
ENSOCUP00000002590	zf-C2H2	PF00096.26	4.4e-34	6	6
ENSOCUP00000002590	zf-met	PF12874.7	1.2e-24	1	5
ENSOCUP00000002590	zf-met	PF12874.7	1.2e-24	2	5
ENSOCUP00000002590	zf-met	PF12874.7	1.2e-24	3	5
ENSOCUP00000002590	zf-met	PF12874.7	1.2e-24	4	5
ENSOCUP00000002590	zf-met	PF12874.7	1.2e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000002977	-	8042	XM_008257291	ENSOCUP00000002590	1400 (aa)	XP_008255513	G1SIS3

Gene Model

Click here to download ENSOCUG00000004364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004364	-	94	59.615	ENSOCUG00000011797	SALL4	90	65.385
ENSOCUG00000004364	-	80	65.306	ENSOCUG00000029398	SALL3	98	65.306
ENSOCUG00000004364	-	61	51.852	ENSOCUG00000009378	ZNF236	61	51.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004364	-	72	65.306	ENSG00000256463	SALL3	97	65.306	Homo_sapiens
ENSOCUG00000004364	-	92	63.462	ENSAPOG00000004264	sall3b	78	63.462	Acanthochromis_polyacanthus
ENSOCUG00000004364	-	92	45.952	ENSAPOG00000020922	sall3a	96	46.126	Acanthochromis_polyacanthus
ENSOCUG00000004364	-	92	51.949	ENSAMEG00000010206	SALL3	98	52.141	Ailuropoda_melanoleuca
ENSOCUG00000004364	-	72	56.148	ENSACIG00000019407	sall3b	56	74.251	Amphilophus_citrinellus
ENSOCUG00000004364	-	68	63.462	ENSACIG00000014041	sall3a	95	63.462	Amphilophus_citrinellus
ENSOCUG00000004364	-	92	63.462	ENSAOCG00000012779	sall3b	87	63.462	Amphiprion_ocellaris
ENSOCUG00000004364	-	92	46.953	ENSAOCG00000010863	sall3a	92	63.462	Amphiprion_ocellaris
ENSOCUG00000004364	-	91	63.462	ENSAPEG00000019278	sall3a	96	63.462	Amphiprion_percula
ENSOCUG00000004364	-	60	63.462	ENSAPEG00000018170	sall3b	78	63.462	Amphiprion_percula
ENSOCUG00000004364	-	51	63.462	ENSATEG00000004914	sall3b	68	63.462	Anabas_testudineus
ENSOCUG00000004364	-	92	46.171	ENSATEG00000024524	sall3a	99	50.471	Anabas_testudineus
ENSOCUG00000004364	-	93	63.462	ENSAPLG00000013214	SALL3	99	63.462	Anas_platyrhynchos
ENSOCUG00000004364	-	93	63.462	ENSACAG00000000478	SALL3	97	63.462	Anolis_carolinensis
ENSOCUG00000004364	-	85	54.468	ENSANAG00000032412	SALL3	92	53.532	Aotus_nancymaae
ENSOCUG00000004364	-	57	76.000	ENSACLG00000022451	sall3a	96	63.462	Astatotilapia_calliptera
ENSOCUG00000004364	-	70	63.462	ENSAMXG00000035442	sall3b	87	63.462	Astyanax_mexicanus
ENSOCUG00000004364	-	91	63.462	ENSAMXG00000011185	sall3a	96	64.103	Astyanax_mexicanus
ENSOCUG00000004364	-	81	54.669	ENSBTAG00000050200	SALL3	97	65.306	Bos_taurus
ENSOCUG00000004364	-	85	65.306	ENSCJAG00000007332	SALL3	91	63.462	Callithrix_jacchus
ENSOCUG00000004364	-	82	65.306	ENSCAFG00000000013	SALL3	98	65.306	Canis_familiaris
ENSOCUG00000004364	-	82	55.481	ENSCAFG00020015092	SALL3	98	55.141	Canis_lupus_dingo
ENSOCUG00000004364	-	81	55.292	ENSCHIG00000000145	SALL3	88	55.983	Capra_hircus
ENSOCUG00000004364	-	66	63.462	ENSTSYG00000028846	SALL3	94	65.306	Carlito_syrichta
ENSOCUG00000004364	-	79	63.462	ENSCAPG00000006496	SALL3	90	65.306	Cavia_aperea
ENSOCUG00000004364	-	92	63.462	ENSCPOG00000008546	SALL3	98	65.306	Cavia_porcellus
ENSOCUG00000004364	-	84	63.462	ENSCCAG00000034863	SALL3	91	63.462	Cebus_capucinus
ENSOCUG00000004364	-	72	63.462	ENSCATG00000029727	SALL3	95	65.306	Cercocebus_atys
ENSOCUG00000004364	-	81	63.462	ENSCLAG00000007727	SALL3	88	65.306	Chinchilla_lanigera
ENSOCUG00000004364	-	71	58.988	ENSCSAG00000018244	SALL3	92	54.315	Chlorocebus_sabaeus
ENSOCUG00000004364	-	60	63.462	ENSCHOG00000013939	-	90	63.462	Choloepus_hoffmanni
ENSOCUG00000004364	-	96	63.462	ENSCPBG00000003657	SALL3	99	63.462	Chrysemys_picta_bellii
ENSOCUG00000004364	-	67	68.254	ENSCANG00000030302	SALL3	95	68.254	Colobus_angolensis_palliatus
ENSOCUG00000004364	-	81	63.462	ENSCGRG00001018203	Sall3	87	65.306	Cricetulus_griseus_chok1gshd
ENSOCUG00000004364	-	81	63.462	ENSCGRG00000017127	Sall3	89	65.306	Cricetulus_griseus_crigri
ENSOCUG00000004364	-	78	76.836	ENSCSEG00000009058	sall3a	90	58.974	Cynoglossus_semilaevis
ENSOCUG00000004364	-	70	51.685	ENSCSEG00000009569	sall3b	59	71.512	Cynoglossus_semilaevis
ENSOCUG00000004364	-	68	61.538	ENSCVAG00000009684	sall3a	92	61.538	Cyprinodon_variegatus
ENSOCUG00000004364	-	82	63.462	ENSCVAG00000017005	sall3b	89	76.923	Cyprinodon_variegatus
ENSOCUG00000004364	-	77	63.462	ENSDARG00000057586	sall3b	50	63.462	Danio_rerio
ENSOCUG00000004364	-	94	45.377	ENSDARG00000079613	sall3a	98	45.318	Danio_rerio
ENSOCUG00000004364	-	72	59.278	ENSDNOG00000025483	SALL3	96	58.212	Dasypus_novemcinctus
ENSOCUG00000004364	-	67	59.175	ENSDORG00000002702	Sall3	88	59.691	Dipodomys_ordii
ENSOCUG00000004364	-	70	55.149	ENSETEG00000001481	SALL3	92	56.995	Echinops_telfairi
ENSOCUG00000004364	-	92	63.462	ENSEASG00005002071	SALL3	87	65.306	Equus_asinus_asinus
ENSOCUG00000004364	-	92	65.306	ENSECAG00000015414	SALL3	87	65.306	Equus_caballus
ENSOCUG00000004364	-	92	41.181	ENSELUG00000009541	sall3b	85	63.462	Esox_lucius
ENSOCUG00000004364	-	92	65.306	ENSFCAG00000028839	SALL3	96	65.306	Felis_catus
ENSOCUG00000004364	-	82	63.462	ENSFALG00000013343	SALL3	97	63.462	Ficedula_albicollis
ENSOCUG00000004364	-	94	63.462	ENSFDAG00000014697	SALL3	96	65.306	Fukomys_damarensis
ENSOCUG00000004364	-	65	63.462	ENSGMOG00000006649	sall3a	86	63.462	Gadus_morhua
ENSOCUG00000004364	-	82	63.462	ENSGALG00000041404	SALL3	95	63.462	Gallus_gallus
ENSOCUG00000004364	-	92	45.786	ENSGAFG00000001581	sall3a	93	63.462	Gambusia_affinis
ENSOCUG00000004364	-	79	61.538	ENSGAFG00000014435	-	68	67.391	Gambusia_affinis
ENSOCUG00000004364	-	93	40.355	ENSGACG00000002533	sall3b	90	40.131	Gasterosteus_aculeatus
ENSOCUG00000004364	-	93	63.462	ENSGAGG00000000925	SALL3	97	63.462	Gopherus_agassizii
ENSOCUG00000004364	-	72	65.306	ENSGGOG00000008127	SALL3	91	65.306	Gorilla_gorilla
ENSOCUG00000004364	-	83	52.803	ENSHBUG00000004486	sall3a	92	61.538	Haplochromis_burtoni
ENSOCUG00000004364	-	81	63.462	ENSHGLG00000000824	SALL3	96	65.306	Heterocephalus_glaber_female
ENSOCUG00000004364	-	81	63.462	ENSHGLG00100008694	SALL3	96	65.306	Heterocephalus_glaber_male
ENSOCUG00000004364	-	91	61.538	ENSHCOG00000010423	sall3a	97	63.462	Hippocampus_comes
ENSOCUG00000004364	-	92	51.899	ENSHCOG00000004745	sall3b	75	62.286	Hippocampus_comes
ENSOCUG00000004364	-	85	71.795	ENSIPUG00000003006	sall3b	58	77.778	Ictalurus_punctatus
ENSOCUG00000004364	-	83	63.462	ENSIPUG00000003378	sall3	72	63.462	Ictalurus_punctatus
ENSOCUG00000004364	-	94	65.306	ENSSTOG00000004145	SALL3	98	65.306	Ictidomys_tridecemlineatus
ENSOCUG00000004364	-	84	61.538	ENSJJAG00000014351	Sall3	93	55.546	Jaculus_jaculus
ENSOCUG00000004364	-	82	63.462	ENSKMAG00000003846	sall3a	96	63.462	Kryptolebias_marmoratus
ENSOCUG00000004364	-	63	63.462	ENSKMAG00000012418	sall3b	88	63.462	Kryptolebias_marmoratus
ENSOCUG00000004364	-	82	63.462	ENSLBEG00000005152	sall3a	89	63.462	Labrus_bergylta
ENSOCUG00000004364	-	67	63.462	ENSLBEG00000015706	sall3b	82	63.462	Labrus_bergylta
ENSOCUG00000004364	-	92	63.462	ENSLOCG00000007831	sall3a	96	63.462	Lepisosteus_oculatus
ENSOCUG00000004364	-	92	52.402	ENSLAFG00000013521	SALL3	98	53.141	Loxodonta_africana
ENSOCUG00000004364	-	71	63.462	ENSMFAG00000031402	SALL3	84	65.306	Macaca_fascicularis
ENSOCUG00000004364	-	71	65.306	ENSMMUG00000000286	SALL3	91	65.306	Macaca_mulatta
ENSOCUG00000004364	-	69	65.306	ENSMNEG00000029916	SALL3	90	65.306	Macaca_nemestrina
ENSOCUG00000004364	-	92	46.976	ENSMAMG00000001276	sall3a	97	46.642	Mastacembelus_armatus
ENSOCUG00000004364	-	64	63.462	ENSMAMG00000006101	sall3b	50	74.096	Mastacembelus_armatus
ENSOCUG00000004364	-	57	76.000	ENSMZEG00005007586	sall3a	96	63.462	Maylandia_zebra
ENSOCUG00000004364	-	82	63.462	ENSMGAG00000002297	SALL3	97	63.462	Meleagris_gallopavo
ENSOCUG00000004364	-	81	63.462	ENSMAUG00000011828	Sall3	87	65.306	Mesocricetus_auratus
ENSOCUG00000004364	-	73	65.306	ENSMICG00000017395	SALL3	98	65.306	Microcebus_murinus
ENSOCUG00000004364	-	81	63.462	ENSMOCG00000013205	Sall3	87	65.306	Microtus_ochrogaster
ENSOCUG00000004364	-	68	63.462	ENSMMOG00000014246	sall3b	55	74.251	Mola_mola
ENSOCUG00000004364	-	68	63.462	ENSMMOG00000003253	sall3a	95	64.103	Mola_mola
ENSOCUG00000004364	-	92	63.462	ENSMODG00000012231	SALL3	96	63.462	Monodelphis_domestica
ENSOCUG00000004364	-	64	63.462	ENSMALG00000015200	sall3b	78	63.462	Monopterus_albus
ENSOCUG00000004364	-	91	63.462	ENSMALG00000003343	sall3a	91	63.462	Monopterus_albus
ENSOCUG00000004364	-	81	63.462	MGP_CAROLIEiJ_G0022442	Sall3	87	65.306	Mus_caroli
ENSOCUG00000004364	-	81	63.462	ENSMUSG00000024565	Sall3	87	65.306	Mus_musculus
ENSOCUG00000004364	-	81	63.462	MGP_PahariEiJ_G0019170	Sall3	87	65.306	Mus_pahari
ENSOCUG00000004364	-	78	47.990	ENSMPUG00000016646	SALL3	97	65.306	Mustela_putorius_furo
ENSOCUG00000004364	-	92	52.068	ENSMLUG00000010582	SALL3	99	51.137	Myotis_lucifugus
ENSOCUG00000004364	-	81	63.462	ENSNGAG00000023772	Sall3	98	65.306	Nannospalax_galili
ENSOCUG00000004364	-	83	53.007	ENSNBRG00000008974	sall3a	92	61.538	Neolamprologus_brichardi
ENSOCUG00000004364	-	71	65.306	ENSNLEG00000008217	SALL3	97	65.306	Nomascus_leucogenys
ENSOCUG00000004364	-	94	50.760	ENSODEG00000002692	SALL3	93	54.209	Octodon_degus
ENSOCUG00000004364	-	92	47.396	ENSONIG00000007305	sall3a	96	48.024	Oreochromis_niloticus
ENSOCUG00000004364	-	50	63.462	ENSOANG00000010135	-	99	63.462	Ornithorhynchus_anatinus
ENSOCUG00000004364	-	60	63.095	ENSORLG00000024765	-	88	75.926	Oryzias_latipes
ENSOCUG00000004364	-	83	53.150	ENSORLG00000020718	sall3a	96	46.565	Oryzias_latipes
ENSOCUG00000004364	-	60	56.250	ENSORLG00020015105	sall3b	52	57.500	Oryzias_latipes_hni
ENSOCUG00000004364	-	67	52.386	ENSORLG00020001794	sall3a	89	48.505	Oryzias_latipes_hni
ENSOCUG00000004364	-	83	52.490	ENSORLG00015018152	sall3a	95	64.103	Oryzias_latipes_hsok
ENSOCUG00000004364	-	80	55.111	ENSORLG00015005877	sall3b	88	71.429	Oryzias_latipes_hsok
ENSOCUG00000004364	-	77	75.429	ENSOMEG00000011390	sall3a	96	45.903	Oryzias_melastigma
ENSOCUG00000004364	-	67	59.440	ENSOGAG00000031681	SALL3	87	55.090	Otolemur_garnettii
ENSOCUG00000004364	-	70	60.654	ENSOARG00000004353	SALL3	98	65.789	Ovis_aries
ENSOCUG00000004364	-	74	68.182	ENSPPAG00000029586	-	98	68.182	Pan_paniscus
ENSOCUG00000004364	-	72	65.306	ENSPTRG00000010126	SALL3	91	65.306	Pan_troglodytes
ENSOCUG00000004364	-	71	63.462	ENSPANG00000006485	SALL3	96	63.462	Papio_anubis
ENSOCUG00000004364	-	87	63.462	ENSPKIG00000013427	sall3a	95	65.909	Paramormyrops_kingsleyae
ENSOCUG00000004364	-	92	47.270	ENSPKIG00000018271	SALL3	92	63.462	Paramormyrops_kingsleyae
ENSOCUG00000004364	-	93	63.462	ENSPSIG00000008556	SALL3	97	65.657	Pelodiscus_sinensis
ENSOCUG00000004364	-	66	63.462	ENSPMGG00000017042	sall3a	89	63.462	Periophthalmus_magnuspinnatus
ENSOCUG00000004364	-	81	55.659	ENSPEMG00000022799	Sall3	87	56.155	Peromyscus_maniculatus_bairdii
ENSOCUG00000004364	-	92	63.462	ENSPCIG00000002472	SALL3	97	63.462	Phascolarctos_cinereus
ENSOCUG00000004364	-	80	63.462	ENSPFOG00000013292	sall3b	73	63.462	Poecilia_formosa
ENSOCUG00000004364	-	91	63.462	ENSPLAG00000018123	sall3a	95	63.462	Poecilia_latipinna
ENSOCUG00000004364	-	66	63.462	ENSPMEG00000023703	sall3b	79	63.462	Poecilia_mexicana
ENSOCUG00000004364	-	86	61.538	ENSPREG00000015079	sall3b	72	61.538	Poecilia_reticulata
ENSOCUG00000004364	-	82	61.538	ENSPREG00000014420	sall3a	85	61.538	Poecilia_reticulata
ENSOCUG00000004364	-	72	65.306	ENSPPYG00000009253	SALL3	89	65.306	Pongo_abelii
ENSOCUG00000004364	-	92	52.030	ENSPCAG00000006522	SALL3	98	52.444	Procavia_capensis
ENSOCUG00000004364	-	72	63.462	ENSPCOG00000012553	SALL3	96	65.306	Propithecus_coquereli
ENSOCUG00000004364	-	78	65.217	ENSPVAG00000014645	SALL3	90	65.217	Pteropus_vampyrus
ENSOCUG00000004364	-	83	52.803	ENSPNYG00000012783	sall3a	92	61.538	Pundamilia_nyererei
ENSOCUG00000004364	-	81	56.818	ENSRNOG00000026116	Sall3	97	56.192	Rattus_norvegicus
ENSOCUG00000004364	-	76	65.306	ENSRBIG00000036190	SALL3	76	65.306	Rhinopithecus_bieti
ENSOCUG00000004364	-	72	63.462	ENSRROG00000034130	SALL3	98	54.082	Rhinopithecus_roxellana
ENSOCUG00000004364	-	66	63.462	ENSSBOG00000023380	SALL3	99	65.306	Saimiri_boliviensis_boliviensis
ENSOCUG00000004364	-	92	63.462	ENSSHAG00000015872	SALL3	96	63.462	Sarcophilus_harrisii
ENSOCUG00000004364	-	94	47.820	ENSSFOG00015009159	SALL3	96	63.462	Scleropages_formosus
ENSOCUG00000004364	-	71	63.462	ENSSFOG00015012223	sall3a	99	63.462	Scleropages_formosus
ENSOCUG00000004364	-	89	63.462	ENSSMAG00000019762	sall3b	65	63.462	Scophthalmus_maximus
ENSOCUG00000004364	-	77	76.000	ENSSMAG00000007674	sall3a	90	61.538	Scophthalmus_maximus
ENSOCUG00000004364	-	66	63.462	ENSSDUG00000010584	sall3b	54	74.251	Seriola_dumerili
ENSOCUG00000004364	-	92	47.263	ENSSDUG00000011099	sall3a	96	47.007	Seriola_dumerili
ENSOCUG00000004364	-	67	63.462	ENSSLDG00000016800	sall3b	57	63.462	Seriola_lalandi_dorsalis
ENSOCUG00000004364	-	91	63.462	ENSSLDG00000012706	sall3a	96	63.462	Seriola_lalandi_dorsalis
ENSOCUG00000004364	-	64	63.462	ENSSPAG00000003172	sall3b	80	63.462	Stegastes_partitus
ENSOCUG00000004364	-	82	61.538	ENSSPAG00000013114	sall3a	97	63.462	Stegastes_partitus
ENSOCUG00000004364	-	85	59.091	ENSSSCG00000004858	SALL3	91	61.538	Sus_scrofa
ENSOCUG00000004364	-	82	69.048	ENSTGUG00000006541	SALL3	99	67.442	Taeniopygia_guttata
ENSOCUG00000004364	-	68	63.462	ENSTRUG00000017423	sall3a	97	64.103	Takifugu_rubripes
ENSOCUG00000004364	-	70	61.538	ENSTNIG00000001257	sall3a	84	64.103	Tetraodon_nigroviridis
ENSOCUG00000004364	-	57	61.538	ENSTBEG00000008964	SALL3	74	65.306	Tupaia_belangeri
ENSOCUG00000004364	-	68	57.230	ENSTTRG00000004958	SALL3	88	56.680	Tursiops_truncatus
ENSOCUG00000004364	-	92	51.627	ENSUAMG00000016908	SALL3	95	65.306	Ursus_americanus
ENSOCUG00000004364	-	66	56.558	ENSVVUG00000018838	SALL3	96	55.374	Vulpes_vulpes
ENSOCUG00000004364	-	92	63.462	ENSXETG00000000845	sall3	96	63.462	Xenopus_tropicalis
ENSOCUG00000004364	-	92	45.694	ENSXCOG00000016907	sall3a	90	61.538	Xiphophorus_couchianus
ENSOCUG00000004364	-	52	61.538	ENSXCOG00000018799	sall3b	78	66.460	Xiphophorus_couchianus
ENSOCUG00000004364	-	66	63.830	ENSXMAG00000000798	sall3b	79	61.538	Xiphophorus_maculatus
ENSOCUG00000004364	-	91	63.462	ENSXMAG00000023447	sall3a	89	63.462	Xiphophorus_maculatus