EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004463 (Gene tree)
Gene ID: 100347578
Gene Symbol: MTREX
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 100640 bases
Position: chr11:71258866-71359505
Accession: 100347578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000003855	rRNA_proc-arch	PF13234.6	1.4e-87	1	1
ENSOCUP00000003855	DEAD	PF00270.29	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004464	MTREX-201	3123	XM_002714036	ENSOCUP00000003855	1040 (aa)	XP_002714082	G1SLV3

Gene Model

Click here to download ENSOCUG00000004463's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004463	MTREX	88	37.083	ENSOCUG00000007019	SKIV2L	76	37.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004463	MTREX	100	98.752	ENSG00000039123	MTREX	100	98.752	Homo_sapiens
ENSOCUG00000004463	MTREX	100	83.652	ENSAPOG00000007814	mtrex	100	83.652	Acanthochromis_polyacanthus
ENSOCUG00000004463	MTREX	100	98.370	ENSAMEG00000013856	MTREX	100	98.370	Ailuropoda_melanoleuca
ENSOCUG00000004463	MTREX	100	82.280	ENSACIG00000015117	mtrex	96	87.983	Amphilophus_citrinellus
ENSOCUG00000004463	MTREX	100	83.492	ENSAOCG00000011884	mtrex	100	83.652	Amphiprion_ocellaris
ENSOCUG00000004463	MTREX	100	83.397	ENSAPEG00000019384	mtrex	100	83.556	Amphiprion_percula
ENSOCUG00000004463	MTREX	100	84.271	ENSATEG00000015117	mtrex	100	84.432	Anabas_testudineus
ENSOCUG00000004463	MTREX	95	92.821	ENSAPLG00000009694	MTREX	99	92.821	Anas_platyrhynchos
ENSOCUG00000004463	MTREX	100	91.538	ENSACAG00000015200	MTREX	96	91.092	Anolis_carolinensis
ENSOCUG00000004463	MTREX	100	98.656	ENSANAG00000023095	MTREX	100	98.656	Aotus_nancymaae
ENSOCUG00000004463	MTREX	100	83.078	ENSACLG00000001921	mtrex	100	83.174	Astatotilapia_calliptera
ENSOCUG00000004463	MTREX	97	81.988	ENSAMXG00000018751	mtrex	99	84.306	Astyanax_mexicanus
ENSOCUG00000004463	MTREX	100	98.654	ENSBTAG00000010518	MTREX	100	98.654	Bos_taurus
ENSOCUG00000004463	MTREX	91	53.628	WBGene00012342	mtr-4	98	51.830	Caenorhabditis_elegans
ENSOCUG00000004463	MTREX	100	97.519	ENSCJAG00000001773	MTREX	100	97.519	Callithrix_jacchus
ENSOCUG00000004463	MTREX	100	98.656	ENSCAFG00000006818	MTREX	100	98.656	Canis_familiaris
ENSOCUG00000004463	MTREX	100	98.656	ENSCAFG00020024352	MTREX	100	98.656	Canis_lupus_dingo
ENSOCUG00000004463	MTREX	100	98.369	ENSCHIG00000024413	MTREX	100	98.369	Capra_hircus
ENSOCUG00000004463	MTREX	94	98.025	ENSTSYG00000007389	MTREX	100	98.025	Carlito_syrichta
ENSOCUG00000004463	MTREX	96	73.848	ENSCAPG00000008696	MTREX	100	73.848	Cavia_aperea
ENSOCUG00000004463	MTREX	100	98.177	ENSCPOG00000009797	MTREX	100	98.177	Cavia_porcellus
ENSOCUG00000004463	MTREX	100	98.560	ENSCCAG00000014177	MTREX	100	98.560	Cebus_capucinus
ENSOCUG00000004463	MTREX	100	98.560	ENSCATG00000042153	MTREX	100	98.560	Cercocebus_atys
ENSOCUG00000004463	MTREX	100	97.889	ENSCLAG00000006622	MTREX	100	97.889	Chinchilla_lanigera
ENSOCUG00000004463	MTREX	100	93.780	ENSCSAG00000016445	MTREX	100	93.876	Chlorocebus_sabaeus
ENSOCUG00000004463	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSOCUG00000004463	MTREX	100	92.219	ENSCPBG00000026551	MTREX	94	92.699	Chrysemys_picta_bellii
ENSOCUG00000004463	MTREX	99	66.858	ENSCING00000003239	-	99	66.571	Ciona_intestinalis
ENSOCUG00000004463	MTREX	99	65.616	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSOCUG00000004463	MTREX	100	98.464	ENSCANG00000035770	MTREX	100	98.464	Colobus_angolensis_palliatus
ENSOCUG00000004463	MTREX	100	97.697	ENSCGRG00001024680	Mtrex	100	97.697	Cricetulus_griseus_chok1gshd
ENSOCUG00000004463	MTREX	100	97.697	ENSCGRG00000000307	Mtrex	100	97.697	Cricetulus_griseus_crigri
ENSOCUG00000004463	MTREX	100	82.330	ENSCSEG00000018621	mtrex	98	82.330	Cynoglossus_semilaevis
ENSOCUG00000004463	MTREX	100	84.211	ENSCVAG00000004556	mtrex	100	84.211	Cyprinodon_variegatus
ENSOCUG00000004463	MTREX	100	85.072	ENSDARG00000013457	mtrex	100	85.072	Danio_rerio
ENSOCUG00000004463	MTREX	100	96.845	ENSDNOG00000015375	MTREX	100	96.845	Dasypus_novemcinctus
ENSOCUG00000004463	MTREX	100	97.889	ENSDORG00000006782	Mtrex	100	97.889	Dipodomys_ordii
ENSOCUG00000004463	MTREX	99	62.595	FBgn0001986	Mtr4	99	62.784	Drosophila_melanogaster
ENSOCUG00000004463	MTREX	90	80.966	ENSETEG00000000727	MTREX	90	80.966	Echinops_telfairi
ENSOCUG00000004463	MTREX	99	74.687	ENSEBUG00000012869	mtrex	99	74.234	Eptatretus_burgeri
ENSOCUG00000004463	MTREX	100	98.081	ENSEASG00005013270	MTREX	100	98.081	Equus_asinus_asinus
ENSOCUG00000004463	MTREX	100	98.177	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSOCUG00000004463	MTREX	98	88.488	ENSEEUG00000000527	MTREX	100	88.488	Erinaceus_europaeus
ENSOCUG00000004463	MTREX	98	85.271	ENSELUG00000004898	mtrex	100	89.706	Esox_lucius
ENSOCUG00000004463	MTREX	100	98.369	ENSFCAG00000010575	MTREX	100	98.369	Felis_catus
ENSOCUG00000004463	MTREX	100	90.481	ENSFALG00000010850	MTREX	100	90.481	Ficedula_albicollis
ENSOCUG00000004463	MTREX	100	97.981	ENSFDAG00000011199	MTREX	100	97.981	Fukomys_damarensis
ENSOCUG00000004463	MTREX	100	83.794	ENSFHEG00000023014	mtrex	100	83.158	Fundulus_heteroclitus
ENSOCUG00000004463	MTREX	100	79.637	ENSGMOG00000014702	mtrex	100	79.924	Gadus_morhua
ENSOCUG00000004463	MTREX	100	91.154	ENSGALG00000014709	MTREX	86	91.154	Gallus_gallus
ENSOCUG00000004463	MTREX	100	83.889	ENSGAFG00000012425	mtrex	100	84.034	Gambusia_affinis
ENSOCUG00000004463	MTREX	100	79.561	ENSGACG00000016260	mtrex	96	85.435	Gasterosteus_aculeatus
ENSOCUG00000004463	MTREX	100	92.411	ENSGAGG00000020036	MTREX	100	92.411	Gopherus_agassizii
ENSOCUG00000004463	MTREX	100	98.848	ENSGGOG00000001867	MTREX	100	98.848	Gorilla_gorilla
ENSOCUG00000004463	MTREX	100	83.078	ENSHBUG00000006229	mtrex	100	83.174	Haplochromis_burtoni
ENSOCUG00000004463	MTREX	100	98.173	ENSHGLG00000019445	SKIV2L2	100	98.173	Heterocephalus_glaber_female
ENSOCUG00000004463	MTREX	100	98.173	ENSHGLG00100011833	SKIV2L2	100	98.173	Heterocephalus_glaber_male
ENSOCUG00000004463	MTREX	91	84.929	ENSHCOG00000019995	mtrex	100	84.929	Hippocampus_comes
ENSOCUG00000004463	MTREX	100	85.249	ENSIPUG00000024348	skiv2l2	100	85.249	Ictalurus_punctatus
ENSOCUG00000004463	MTREX	100	98.273	ENSSTOG00000010802	MTREX	100	98.273	Ictidomys_tridecemlineatus
ENSOCUG00000004463	MTREX	100	91.250	ENSJJAG00000020975	Mtrex	100	91.250	Jaculus_jaculus
ENSOCUG00000004463	MTREX	100	83.031	ENSKMAG00000012642	mtrex	100	83.158	Kryptolebias_marmoratus
ENSOCUG00000004463	MTREX	100	83.461	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSOCUG00000004463	MTREX	100	88.964	ENSLACG00000009075	MTREX	100	88.612	Latimeria_chalumnae
ENSOCUG00000004463	MTREX	100	87.428	ENSLOCG00000010186	mtrex	100	87.044	Lepisosteus_oculatus
ENSOCUG00000004463	MTREX	99	95.681	ENSLAFG00000010497	MTREX	100	95.681	Loxodonta_africana
ENSOCUG00000004463	MTREX	100	98.560	ENSMFAG00000031610	MTREX	100	98.560	Macaca_fascicularis
ENSOCUG00000004463	MTREX	100	97.031	ENSMMUG00000010379	MTREX	100	97.031	Macaca_mulatta
ENSOCUG00000004463	MTREX	100	98.560	ENSMNEG00000032746	MTREX	100	98.560	Macaca_nemestrina
ENSOCUG00000004463	MTREX	100	98.560	ENSMLEG00000041051	MTREX	100	98.560	Mandrillus_leucophaeus
ENSOCUG00000004463	MTREX	95	86.273	ENSMAMG00000016753	mtrex	96	88.518	Mastacembelus_armatus
ENSOCUG00000004463	MTREX	100	83.078	ENSMZEG00005000414	mtrex	100	83.174	Maylandia_zebra
ENSOCUG00000004463	MTREX	95	67.611	ENSMGAG00000003980	MTREX	99	67.611	Meleagris_gallopavo
ENSOCUG00000004463	MTREX	100	97.502	ENSMAUG00000010727	Mtrex	100	97.502	Mesocricetus_auratus
ENSOCUG00000004463	MTREX	100	99.040	ENSMICG00000012779	MTREX	100	99.040	Microcebus_murinus
ENSOCUG00000004463	MTREX	100	97.313	ENSMOCG00000019886	Mtrex	100	97.313	Microtus_ochrogaster
ENSOCUG00000004463	MTREX	100	81.931	ENSMMOG00000002476	mtrex	100	81.931	Mola_mola
ENSOCUG00000004463	MTREX	100	93.558	ENSMODG00000019494	MTREX	100	93.462	Monodelphis_domestica
ENSOCUG00000004463	MTREX	92	82.600	ENSMALG00000002917	mtrex	99	82.600	Monopterus_albus
ENSOCUG00000004463	MTREX	100	97.404	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.404	Mus_caroli
ENSOCUG00000004463	MTREX	100	97.500	ENSMUSG00000016018	Mtrex	100	97.500	Mus_musculus
ENSOCUG00000004463	MTREX	100	97.596	MGP_PahariEiJ_G0015967	Mtrex	100	97.596	Mus_pahari
ENSOCUG00000004463	MTREX	100	97.500	MGP_SPRETEiJ_G0019775	Mtrex	100	97.500	Mus_spretus
ENSOCUG00000004463	MTREX	100	98.656	ENSMPUG00000007619	MTREX	100	98.656	Mustela_putorius_furo
ENSOCUG00000004463	MTREX	100	96.932	ENSMLUG00000001152	MTREX	100	96.932	Myotis_lucifugus
ENSOCUG00000004463	MTREX	100	97.985	ENSNGAG00000011938	Mtrex	100	97.985	Nannospalax_galili
ENSOCUG00000004463	MTREX	100	83.174	ENSNBRG00000011293	mtrex	100	83.270	Neolamprologus_brichardi
ENSOCUG00000004463	MTREX	100	94.636	ENSNLEG00000001494	MTREX	100	94.636	Nomascus_leucogenys
ENSOCUG00000004463	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSOCUG00000004463	MTREX	100	83.269	ENSOPRG00000008009	MTREX	100	83.269	Ochotona_princeps
ENSOCUG00000004463	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSOCUG00000004463	MTREX	100	82.983	ENSONIG00000007587	mtrex	100	83.078	Oreochromis_niloticus
ENSOCUG00000004463	MTREX	100	82.904	ENSORLG00000005443	mtrex	100	82.904	Oryzias_latipes
ENSOCUG00000004463	MTREX	100	82.808	ENSORLG00020006329	mtrex	100	82.808	Oryzias_latipes_hni
ENSOCUG00000004463	MTREX	100	82.808	ENSORLG00015012924	mtrex	100	82.808	Oryzias_latipes_hsok
ENSOCUG00000004463	MTREX	100	82.129	ENSOMEG00000008825	mtrex	100	82.190	Oryzias_melastigma
ENSOCUG00000004463	MTREX	100	98.369	ENSOGAG00000002886	MTREX	100	98.369	Otolemur_garnettii
ENSOCUG00000004463	MTREX	100	98.086	ENSOARG00000007764	MTREX	100	98.086	Ovis_aries
ENSOCUG00000004463	MTREX	100	98.752	ENSPPAG00000039291	MTREX	100	98.752	Pan_paniscus
ENSOCUG00000004463	MTREX	100	98.369	ENSPPRG00000019701	MTREX	100	98.369	Panthera_pardus
ENSOCUG00000004463	MTREX	100	96.833	ENSPTIG00000009313	MTREX	100	96.833	Panthera_tigris_altaica
ENSOCUG00000004463	MTREX	100	98.752	ENSPTRG00000016878	MTREX	100	98.752	Pan_troglodytes
ENSOCUG00000004463	MTREX	100	98.464	ENSPANG00000009697	MTREX	100	98.464	Papio_anubis
ENSOCUG00000004463	MTREX	100	86.986	ENSPKIG00000020833	mtrex	100	86.986	Paramormyrops_kingsleyae
ENSOCUG00000004463	MTREX	100	92.123	ENSPSIG00000012150	MTREX	100	92.123	Pelodiscus_sinensis
ENSOCUG00000004463	MTREX	100	81.662	ENSPMGG00000002582	mtrex	100	81.662	Periophthalmus_magnuspinnatus
ENSOCUG00000004463	MTREX	95	66.197	ENSPMAG00000009668	mtrex	100	65.795	Petromyzon_marinus
ENSOCUG00000004463	MTREX	91	96.832	ENSPCIG00000024730	MTREX	100	96.832	Phascolarctos_cinereus
ENSOCUG00000004463	MTREX	75	87.452	ENSPFOG00000003141	mtrex	100	87.690	Poecilia_formosa
ENSOCUG00000004463	MTREX	100	83.889	ENSPLAG00000021311	mtrex	100	84.211	Poecilia_latipinna
ENSOCUG00000004463	MTREX	92	87.828	ENSPMEG00000010597	mtrex	99	88.143	Poecilia_mexicana
ENSOCUG00000004463	MTREX	100	83.794	ENSPREG00000003089	mtrex	100	84.115	Poecilia_reticulata
ENSOCUG00000004463	MTREX	98	98.829	ENSPPYG00000015469	MTREX	98	98.829	Pongo_abelii
ENSOCUG00000004463	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSOCUG00000004463	MTREX	99	93.361	ENSPCOG00000018092	MTREX	100	93.361	Propithecus_coquereli
ENSOCUG00000004463	MTREX	100	98.464	ENSPVAG00000002445	MTREX	100	98.464	Pteropus_vampyrus
ENSOCUG00000004463	MTREX	100	82.983	ENSPNYG00000006164	mtrex	100	83.078	Pundamilia_nyererei
ENSOCUG00000004463	MTREX	100	86.316	ENSPNAG00000008794	mtrex	100	86.411	Pygocentrus_nattereri
ENSOCUG00000004463	MTREX	99	97.182	ENSRNOG00000010125	Mtrex	97	97.182	Rattus_norvegicus
ENSOCUG00000004463	MTREX	100	96.833	ENSRBIG00000034930	MTREX	100	96.833	Rhinopithecus_bieti
ENSOCUG00000004463	MTREX	100	98.560	ENSRROG00000039895	MTREX	100	98.560	Rhinopithecus_roxellana
ENSOCUG00000004463	MTREX	90	55.556	YJL050W	MTR4	99	51.589	Saccharomyces_cerevisiae
ENSOCUG00000004463	MTREX	100	98.464	ENSSBOG00000026693	MTREX	100	98.464	Saimiri_boliviensis_boliviensis
ENSOCUG00000004463	MTREX	96	95.486	ENSSHAG00000004600	MTREX	100	95.486	Sarcophilus_harrisii
ENSOCUG00000004463	MTREX	100	87.739	ENSSFOG00015014355	skiv2l2	100	87.739	Scleropages_formosus
ENSOCUG00000004463	MTREX	100	83.238	ENSSMAG00000007572	mtrex	100	83.365	Scophthalmus_maximus
ENSOCUG00000004463	MTREX	100	83.939	ENSSDUG00000023789	mtrex	100	83.939	Seriola_dumerili
ENSOCUG00000004463	MTREX	100	83.748	ENSSLDG00000006301	mtrex	100	83.748	Seriola_lalandi_dorsalis
ENSOCUG00000004463	MTREX	100	94.338	ENSSARG00000008387	MTREX	100	94.338	Sorex_araneus
ENSOCUG00000004463	MTREX	100	80.115	ENSSPUG00000007071	MTREX	100	80.115	Sphenodon_punctatus
ENSOCUG00000004463	MTREX	100	81.923	ENSSPAG00000011319	mtrex	100	82.404	Stegastes_partitus
ENSOCUG00000004463	MTREX	100	98.560	ENSSSCG00000016911	MTREX	100	98.560	Sus_scrofa
ENSOCUG00000004463	MTREX	100	90.298	ENSTGUG00000002480	MTREX	100	90.298	Taeniopygia_guttata
ENSOCUG00000004463	MTREX	100	83.048	ENSTRUG00000014571	mtrex	100	83.174	Takifugu_rubripes
ENSOCUG00000004463	MTREX	100	82.534	ENSTBEG00000007769	MTREX	100	82.630	Tupaia_belangeri
ENSOCUG00000004463	MTREX	100	98.558	ENSTTRG00000008678	MTREX	100	98.558	Tursiops_truncatus
ENSOCUG00000004463	MTREX	100	98.273	ENSUAMG00000023061	MTREX	100	98.273	Ursus_americanus
ENSOCUG00000004463	MTREX	100	97.701	ENSUMAG00000009373	MTREX	99	99.770	Ursus_maritimus
ENSOCUG00000004463	MTREX	100	87.236	ENSVPAG00000011174	MTREX	100	87.236	Vicugna_pacos
ENSOCUG00000004463	MTREX	100	98.752	ENSVVUG00000021337	MTREX	100	98.752	Vulpes_vulpes
ENSOCUG00000004463	MTREX	100	88.953	ENSXETG00000032798	MTREX	100	88.953	Xenopus_tropicalis
ENSOCUG00000004463	MTREX	100	83.508	ENSXMAG00000004799	mtrex	100	83.732	Xiphophorus_maculatus