EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004930 (Gene tree)
Gene ID: 100345768
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 40430 bases
Position: chr13:1278985-1319414
Accession: 100345768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004266	zf-CCCH	PF00642.24	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004933	RC3H1-201	3544	XM_008263804	ENSOCUP00000004266	1134 (aa)	XP_008262026	G1SMU3

Gene Model

Click here to download ENSOCUG00000004930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004930	RC3H1	92	54.101	ENSOCUG00000008804	RC3H2	87	53.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004930	RC3H1	98	96.150	ENSG00000135870	RC3H1	99	96.150	Homo_sapiens
ENSOCUG00000004930	RC3H1	98	95.968	ENSAMEG00000015657	RC3H1	99	95.968	Ailuropoda_melanoleuca
ENSOCUG00000004930	RC3H1	98	87.611	ENSAPLG00000005341	RC3H1	99	87.068	Anas_platyrhynchos
ENSOCUG00000004930	RC3H1	98	85.740	ENSACAG00000015271	RC3H1	99	85.182	Anolis_carolinensis
ENSOCUG00000004930	RC3H1	98	96.061	ENSANAG00000036716	RC3H1	99	96.150	Aotus_nancymaae
ENSOCUG00000004930	RC3H1	98	94.808	ENSBTAG00000052708	RC3H1	99	94.808	Bos_taurus
ENSOCUG00000004930	RC3H1	98	95.882	ENSCJAG00000009106	RC3H1	99	95.971	Callithrix_jacchus
ENSOCUG00000004930	RC3H1	98	96.237	ENSCAFG00000014434	RC3H1	99	96.237	Canis_familiaris
ENSOCUG00000004930	RC3H1	98	96.237	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSOCUG00000004930	RC3H1	98	95.072	ENSCHIG00000002873	RC3H1	99	95.072	Capra_hircus
ENSOCUG00000004930	RC3H1	98	94.091	ENSTSYG00000003913	RC3H1	99	94.091	Carlito_syrichta
ENSOCUG00000004930	RC3H1	98	90.510	ENSCPOG00000004349	RC3H1	99	90.242	Cavia_porcellus
ENSOCUG00000004930	RC3H1	98	93.733	ENSCCAG00000025652	RC3H1	98	95.885	Cebus_capucinus
ENSOCUG00000004930	RC3H1	98	96.150	ENSCATG00000033497	RC3H1	99	96.150	Cercocebus_atys
ENSOCUG00000004930	RC3H1	98	94.181	ENSCLAG00000011267	RC3H1	99	94.181	Chinchilla_lanigera
ENSOCUG00000004930	RC3H1	96	96.225	ENSCSAG00000011823	RC3H1	85	96.225	Chlorocebus_sabaeus
ENSOCUG00000004930	RC3H1	91	96.304	ENSCPBG00000014670	RC3H1	98	96.304	Chrysemys_picta_bellii
ENSOCUG00000004930	RC3H1	98	96.154	ENSCANG00000032120	RC3H1	99	96.154	Colobus_angolensis_palliatus
ENSOCUG00000004930	RC3H1	98	93.728	ENSCGRG00001020812	Rc3h1	99	93.280	Cricetulus_griseus_chok1gshd
ENSOCUG00000004930	RC3H1	98	93.728	ENSCGRG00000011952	Rc3h1	99	93.280	Cricetulus_griseus_crigri
ENSOCUG00000004930	RC3H1	55	94.212	ENSDNOG00000011494	RC3H1	99	94.212	Dasypus_novemcinctus
ENSOCUG00000004930	RC3H1	98	94.713	ENSDORG00000004855	Rc3h1	99	94.624	Dipodomys_ordii
ENSOCUG00000004930	RC3H1	80	95.569	ENSETEG00000012064	RC3H1	86	95.569	Echinops_telfairi
ENSOCUG00000004930	RC3H1	98	94.982	ENSEASG00005017000	RC3H1	99	94.982	Equus_asinus_asinus
ENSOCUG00000004930	RC3H1	98	94.892	ENSECAG00000021208	RC3H1	99	94.892	Equus_caballus
ENSOCUG00000004930	RC3H1	83	93.162	ENSEEUG00000014861	RC3H1	93	81.262	Erinaceus_europaeus
ENSOCUG00000004930	RC3H1	98	96.240	ENSFCAG00000014924	RC3H1	99	96.240	Felis_catus
ENSOCUG00000004930	RC3H1	98	86.702	ENSFALG00000002947	RC3H1	99	85.537	Ficedula_albicollis
ENSOCUG00000004930	RC3H1	98	94.181	ENSFDAG00000013303	RC3H1	99	94.181	Fukomys_damarensis
ENSOCUG00000004930	RC3H1	98	86.922	ENSGALG00000004587	RC3H1	99	86.376	Gallus_gallus
ENSOCUG00000004930	RC3H1	98	87.266	ENSGAGG00000018194	RC3H1	99	86.999	Gopherus_agassizii
ENSOCUG00000004930	RC3H1	98	89.117	ENSGGOG00000005735	RC3H1	99	89.295	Gorilla_gorilla
ENSOCUG00000004930	RC3H1	87	88.227	ENSHGLG00000004183	-	98	88.179	Heterocephalus_glaber_female
ENSOCUG00000004930	RC3H1	98	93.912	ENSHGLG00100008577	RC3H1	99	93.912	Heterocephalus_glaber_male
ENSOCUG00000004930	RC3H1	98	94.987	ENSSTOG00000016033	RC3H1	99	94.897	Ictidomys_tridecemlineatus
ENSOCUG00000004930	RC3H1	98	94.265	ENSJJAG00000018915	Rc3h1	99	93.907	Jaculus_jaculus
ENSOCUG00000004930	RC3H1	99	74.413	ENSLACG00000016186	RC3H1	100	77.568	Latimeria_chalumnae
ENSOCUG00000004930	RC3H1	97	96.445	ENSLAFG00000004367	RC3H1	100	96.445	Loxodonta_africana
ENSOCUG00000004930	RC3H1	98	96.061	ENSMFAG00000033725	RC3H1	99	96.061	Macaca_fascicularis
ENSOCUG00000004930	RC3H1	98	95.971	ENSMMUG00000000630	RC3H1	99	95.971	Macaca_mulatta
ENSOCUG00000004930	RC3H1	98	96.150	ENSMNEG00000035968	RC3H1	99	96.150	Macaca_nemestrina
ENSOCUG00000004930	RC3H1	98	96.061	ENSMLEG00000037455	RC3H1	99	96.061	Mandrillus_leucophaeus
ENSOCUG00000004930	RC3H1	88	93.561	ENSMAUG00000020864	Rc3h1	94	93.058	Mesocricetus_auratus
ENSOCUG00000004930	RC3H1	98	96.416	ENSMICG00000003000	RC3H1	99	96.416	Microcebus_murinus
ENSOCUG00000004930	RC3H1	92	92.397	ENSMOCG00000016587	Rc3h1	96	92.012	Microtus_ochrogaster
ENSOCUG00000004930	RC3H1	98	91.682	ENSMODG00000004289	RC3H1	99	91.771	Monodelphis_domestica
ENSOCUG00000004930	RC3H1	98	93.369	MGP_CAROLIEiJ_G0014756	Rc3h1	99	92.921	Mus_caroli
ENSOCUG00000004930	RC3H1	98	93.100	ENSMUSG00000040423	Rc3h1	99	92.652	Mus_musculus
ENSOCUG00000004930	RC3H1	98	93.011	MGP_PahariEiJ_G0027992	Rc3h1	99	92.563	Mus_pahari
ENSOCUG00000004930	RC3H1	98	92.921	MGP_SPRETEiJ_G0015563	Rc3h1	99	92.473	Mus_spretus
ENSOCUG00000004930	RC3H1	98	96.061	ENSMPUG00000004747	RC3H1	99	95.699	Mustela_putorius_furo
ENSOCUG00000004930	RC3H1	98	94.803	ENSMLUG00000011127	RC3H1	99	94.803	Myotis_lucifugus
ENSOCUG00000004930	RC3H1	98	95.251	ENSNGAG00000011135	Rc3h1	99	94.803	Nannospalax_galili
ENSOCUG00000004930	RC3H1	98	96.061	ENSNLEG00000015327	RC3H1	99	96.061	Nomascus_leucogenys
ENSOCUG00000004930	RC3H1	98	84.111	ENSOPRG00000013068	RC3H1	98	83.752	Ochotona_princeps
ENSOCUG00000004930	RC3H1	98	93.733	ENSODEG00000014185	RC3H1	99	93.733	Octodon_degus
ENSOCUG00000004930	RC3H1	98	90.611	ENSOANG00000000924	RC3H1	99	90.788	Ornithorhynchus_anatinus
ENSOCUG00000004930	RC3H1	98	88.909	ENSOGAG00000004044	RC3H1	99	88.909	Otolemur_garnettii
ENSOCUG00000004930	RC3H1	98	95.107	ENSOARG00000013011	RC3H1	99	95.107	Ovis_aries
ENSOCUG00000004930	RC3H1	98	96.154	ENSPPAG00000039253	RC3H1	99	96.154	Pan_paniscus
ENSOCUG00000004930	RC3H1	98	95.789	ENSPPRG00000009007	RC3H1	99	95.789	Panthera_pardus
ENSOCUG00000004930	RC3H1	98	96.075	ENSPTIG00000015326	RC3H1	99	96.075	Panthera_tigris_altaica
ENSOCUG00000004930	RC3H1	98	96.154	ENSPTRG00000001702	RC3H1	99	96.154	Pan_troglodytes
ENSOCUG00000004930	RC3H1	98	96.061	ENSPANG00000008886	RC3H1	99	96.061	Papio_anubis
ENSOCUG00000004930	RC3H1	98	88.523	ENSPSIG00000016181	RC3H1	99	88.612	Pelodiscus_sinensis
ENSOCUG00000004930	RC3H1	98	93.280	ENSPEMG00000011966	Rc3h1	99	92.742	Peromyscus_maniculatus_bairdii
ENSOCUG00000004930	RC3H1	70	93.418	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSOCUG00000004930	RC3H1	98	92.838	ENSPPYG00000000490	RC3H1	98	95.598	Pongo_abelii
ENSOCUG00000004930	RC3H1	79	100.000	ENSPCAG00000010775	RC3H1	85	100.000	Procavia_capensis
ENSOCUG00000004930	RC3H1	81	95.756	ENSPCOG00000021795	RC3H1	94	95.756	Propithecus_coquereli
ENSOCUG00000004930	RC3H1	93	100.000	ENSPVAG00000007593	RC3H1	99	87.545	Pteropus_vampyrus
ENSOCUG00000004930	RC3H1	97	61.322	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSOCUG00000004930	RC3H1	98	96.064	ENSRBIG00000037743	RC3H1	99	96.064	Rhinopithecus_bieti
ENSOCUG00000004930	RC3H1	98	95.971	ENSRROG00000036546	RC3H1	99	95.971	Rhinopithecus_roxellana
ENSOCUG00000004930	RC3H1	92	86.481	ENSSBOG00000010664	RC3H1	98	89.615	Saimiri_boliviensis_boliviensis
ENSOCUG00000004930	RC3H1	98	90.795	ENSSHAG00000007589	RC3H1	99	90.885	Sarcophilus_harrisii
ENSOCUG00000004930	RC3H1	85	86.712	ENSSARG00000004660	RC3H1	85	86.712	Sorex_araneus
ENSOCUG00000004930	RC3H1	98	84.431	ENSSPUG00000018472	RC3H1	99	83.615	Sphenodon_punctatus
ENSOCUG00000004930	RC3H1	98	96.416	ENSSSCG00000015498	RC3H1	99	96.416	Sus_scrofa
ENSOCUG00000004930	RC3H1	98	87.355	ENSTGUG00000004090	RC3H1	99	86.631	Taeniopygia_guttata
ENSOCUG00000004930	RC3H1	92	90.142	ENSTBEG00000005015	RC3H1	92	90.142	Tupaia_belangeri
ENSOCUG00000004930	RC3H1	98	95.353	ENSTTRG00000008572	RC3H1	99	95.353	Tursiops_truncatus
ENSOCUG00000004930	RC3H1	98	95.341	ENSUAMG00000019525	RC3H1	99	95.341	Ursus_americanus
ENSOCUG00000004930	RC3H1	98	95.882	ENSUMAG00000020087	RC3H1	99	95.882	Ursus_maritimus
ENSOCUG00000004930	RC3H1	90	98.649	ENSVPAG00000002591	RC3H1	90	98.649	Vicugna_pacos
ENSOCUG00000004930	RC3H1	98	96.071	ENSVVUG00000014201	RC3H1	99	96.071	Vulpes_vulpes
ENSOCUG00000004930	RC3H1	98	78.590	ENSXETG00000020030	rc3h1	99	77.866	Xenopus_tropicalis