EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000004962 (Gene tree)
Gene ID: 100344714
Gene Symbol: PAPOLG
Alias: -
Full Name: poly(A) polymerase gamma
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 43491 bases
Position: chr2:125413420-125456910
Accession: 100344714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004296	PAP_RNA-bind	PF04926.15	5.8e-28	1	2
ENSOCUP00000004296	PAP_RNA-bind	PF04926.15	5.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004965	PAPOLG-201	6791	XM_002709855	ENSOCUP00000004296	739 (aa)	XP_002709901	G1SMW9

Gene Model

Click here to download ENSOCUG00000004962's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000004962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000004962	PAPOLG	77	66.207	ENSOCUG00000022988	PAPOLB	93	69.606
ENSOCUG00000004962	PAPOLG	99	59.649	ENSOCUG00000011531	PAPOLA	98	60.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000004962	PAPOLG	100	96.356	ENSG00000115421	PAPOLG	100	100.000	Homo_sapiens
ENSOCUG00000004962	PAPOLG	100	72.643	ENSAPOG00000004798	papolg	99	70.620	Acanthochromis_polyacanthus
ENSOCUG00000004962	PAPOLG	99	95.393	ENSAMEG00000018227	PAPOLG	100	96.070	Ailuropoda_melanoleuca
ENSOCUG00000004962	PAPOLG	100	69.137	ENSACIG00000010546	papolg	99	69.583	Amphilophus_citrinellus
ENSOCUG00000004962	PAPOLG	100	72.377	ENSAOCG00000010254	papolg	89	72.510	Amphiprion_ocellaris
ENSOCUG00000004962	PAPOLG	100	72.510	ENSAPEG00000006944	papolg	89	72.643	Amphiprion_percula
ENSOCUG00000004962	PAPOLG	100	72.473	ENSATEG00000009007	papolg	97	71.125	Anabas_testudineus
ENSOCUG00000004962	PAPOLG	99	74.301	ENSAPLG00000006813	PAPOLG	99	74.301	Anas_platyrhynchos
ENSOCUG00000004962	PAPOLG	81	64.967	ENSACAG00000015048	-	100	64.967	Anolis_carolinensis
ENSOCUG00000004962	PAPOLG	100	96.221	ENSANAG00000024627	PAPOLG	100	96.221	Aotus_nancymaae
ENSOCUG00000004962	PAPOLG	100	69.211	ENSACLG00000015592	papolg	89	69.858	Astatotilapia_calliptera
ENSOCUG00000004962	PAPOLG	100	72.500	ENSAMXG00000004611	papolg	100	72.500	Astyanax_mexicanus
ENSOCUG00000004962	PAPOLG	100	95.951	ENSBTAG00000007414	PAPOLG	100	95.951	Bos_taurus
ENSOCUG00000004962	PAPOLG	100	96.626	ENSCJAG00000009102	PAPOLG	100	96.626	Callithrix_jacchus
ENSOCUG00000004962	PAPOLG	100	95.277	ENSCAFG00000002975	PAPOLG	100	88.753	Canis_familiaris
ENSOCUG00000004962	PAPOLG	100	94.511	ENSCAFG00020026859	PAPOLG	100	95.315	Canis_lupus_dingo
ENSOCUG00000004962	PAPOLG	100	95.412	ENSCHIG00000015082	PAPOLG	100	95.412	Capra_hircus
ENSOCUG00000004962	PAPOLG	100	97.166	ENSTSYG00000004947	PAPOLG	100	97.166	Carlito_syrichta
ENSOCUG00000004962	PAPOLG	52	91.864	ENSCAPG00000014901	-	100	91.864	Cavia_aperea
ENSOCUG00000004962	PAPOLG	100	96.626	ENSCPOG00000010306	PAPOLG	100	96.626	Cavia_porcellus
ENSOCUG00000004962	PAPOLG	100	96.491	ENSCCAG00000026893	PAPOLG	100	96.491	Cebus_capucinus
ENSOCUG00000004962	PAPOLG	91	98.701	ENSCATG00000044395	PAPOLG	100	98.701	Cercocebus_atys
ENSOCUG00000004962	PAPOLG	100	96.356	ENSCLAG00000008603	PAPOLG	100	96.356	Chinchilla_lanigera
ENSOCUG00000004962	PAPOLG	100	96.491	ENSCSAG00000014408	PAPOLG	100	96.491	Chlorocebus_sabaeus
ENSOCUG00000004962	PAPOLG	89	94.385	ENSCHOG00000014028	PAPOLG	100	94.385	Choloepus_hoffmanni
ENSOCUG00000004962	PAPOLG	68	64.683	ENSCING00000024664	-	94	64.683	Ciona_intestinalis
ENSOCUG00000004962	PAPOLG	65	65.361	ENSCSAVG00000009085	-	97	65.361	Ciona_savignyi
ENSOCUG00000004962	PAPOLG	100	96.626	ENSCANG00000038120	PAPOLG	100	96.626	Colobus_angolensis_palliatus
ENSOCUG00000004962	PAPOLG	99	94.816	ENSCGRG00001014951	Papolg	100	94.816	Cricetulus_griseus_chok1gshd
ENSOCUG00000004962	PAPOLG	99	94.816	ENSCGRG00000005552	-	100	94.816	Cricetulus_griseus_crigri
ENSOCUG00000004962	PAPOLG	100	69.519	ENSCSEG00000000771	papolg	99	70.620	Cynoglossus_semilaevis
ENSOCUG00000004962	PAPOLG	78	79.861	ENSCVAG00000016602	papolg	89	85.230	Cyprinodon_variegatus
ENSOCUG00000004962	PAPOLG	100	73.148	ENSDARG00000012141	papolg	100	73.148	Danio_rerio
ENSOCUG00000004962	PAPOLG	100	94.872	ENSDNOG00000011326	PAPOLG	100	94.872	Dasypus_novemcinctus
ENSOCUG00000004962	PAPOLG	58	99.534	ENSDORG00000016228	Papolg	100	99.534	Dipodomys_ordii
ENSOCUG00000004962	PAPOLG	99	74.255	ENSETEG00000011815	PAPOLG	99	74.189	Echinops_telfairi
ENSOCUG00000004962	PAPOLG	60	70.942	ENSEBUG00000004020	papolg	90	70.942	Eptatretus_burgeri
ENSOCUG00000004962	PAPOLG	64	57.325	ENSEBUG00000005042	-	80	57.325	Eptatretus_burgeri
ENSOCUG00000004962	PAPOLG	100	96.761	ENSEASG00005002038	PAPOLG	100	96.761	Equus_asinus_asinus
ENSOCUG00000004962	PAPOLG	100	96.626	ENSECAG00000009859	PAPOLG	98	96.206	Equus_caballus
ENSOCUG00000004962	PAPOLG	100	84.480	ENSEEUG00000006196	PAPOLG	100	84.480	Erinaceus_europaeus
ENSOCUG00000004962	PAPOLG	100	72.199	ENSELUG00000014497	papolg	99	65.030	Esox_lucius
ENSOCUG00000004962	PAPOLG	100	95.951	ENSFCAG00000026126	PAPOLG	100	95.951	Felis_catus
ENSOCUG00000004962	PAPOLG	99	66.048	ENSFALG00000011079	PAPOLG	97	66.048	Ficedula_albicollis
ENSOCUG00000004962	PAPOLG	100	96.221	ENSFDAG00000010662	PAPOLG	97	96.221	Fukomys_damarensis
ENSOCUG00000004962	PAPOLG	66	62.279	ENSFHEG00000019080	papolg	90	62.919	Fundulus_heteroclitus
ENSOCUG00000004962	PAPOLG	87	82.852	ENSGMOG00000018772	papolg	93	82.852	Gadus_morhua
ENSOCUG00000004962	PAPOLG	100	71.372	ENSGALG00000007853	PAPOLG	100	71.372	Gallus_gallus
ENSOCUG00000004962	PAPOLG	100	68.407	ENSGAFG00000003263	papolg	89	69.669	Gambusia_affinis
ENSOCUG00000004962	PAPOLG	100	71.693	ENSGACG00000002718	papolg	100	71.863	Gasterosteus_aculeatus
ENSOCUG00000004962	PAPOLG	100	96.626	ENSGGOG00000006083	PAPOLG	100	96.626	Gorilla_gorilla
ENSOCUG00000004962	PAPOLG	100	69.211	ENSHBUG00000004882	papolg	89	70.221	Haplochromis_burtoni
ENSOCUG00000004962	PAPOLG	99	96.070	ENSHGLG00000019610	PAPOLG	100	96.070	Heterocephalus_glaber_female
ENSOCUG00000004962	PAPOLG	100	96.491	ENSHGLG00100010429	PAPOLG	99	96.491	Heterocephalus_glaber_male
ENSOCUG00000004962	PAPOLG	100	69.854	ENSHCOG00000006782	papolg	89	70.252	Hippocampus_comes
ENSOCUG00000004962	PAPOLG	100	71.634	ENSIPUG00000021642	papolg	100	72.326	Ictalurus_punctatus
ENSOCUG00000004962	PAPOLG	100	97.706	ENSSTOG00000010861	PAPOLG	100	97.706	Ictidomys_tridecemlineatus
ENSOCUG00000004962	PAPOLG	58	99.301	ENSJJAG00000015601	Papolg	100	99.301	Jaculus_jaculus
ENSOCUG00000004962	PAPOLG	100	70.424	ENSKMAG00000016439	papolg	97	68.817	Kryptolebias_marmoratus
ENSOCUG00000004962	PAPOLG	100	67.344	ENSLBEG00000023218	papolg	89	67.734	Labrus_bergylta
ENSOCUG00000004962	PAPOLG	99	71.067	ENSLACG00000009543	PAPOLG	100	71.067	Latimeria_chalumnae
ENSOCUG00000004962	PAPOLG	100	72.775	ENSLOCG00000016130	papolg	100	72.775	Lepisosteus_oculatus
ENSOCUG00000004962	PAPOLG	100	94.347	ENSLAFG00000010404	PAPOLG	100	98.135	Loxodonta_africana
ENSOCUG00000004962	PAPOLG	100	96.896	ENSMFAG00000042450	PAPOLG	100	96.896	Macaca_fascicularis
ENSOCUG00000004962	PAPOLG	100	96.896	ENSMMUG00000000498	PAPOLG	100	96.896	Macaca_mulatta
ENSOCUG00000004962	PAPOLG	100	87.936	ENSMNEG00000035939	PAPOLG	100	87.936	Macaca_nemestrina
ENSOCUG00000004962	PAPOLG	100	96.491	ENSMLEG00000039462	PAPOLG	100	96.491	Mandrillus_leucophaeus
ENSOCUG00000004962	PAPOLG	100	71.979	ENSMAMG00000010667	papolg	99	69.880	Mastacembelus_armatus
ENSOCUG00000004962	PAPOLG	100	69.211	ENSMZEG00005018140	papolg	99	70.300	Maylandia_zebra
ENSOCUG00000004962	PAPOLG	100	71.352	ENSMGAG00000001741	PAPOLG	100	71.352	Meleagris_gallopavo
ENSOCUG00000004962	PAPOLG	99	94.679	ENSMAUG00000009088	Papolg	99	94.679	Mesocricetus_auratus
ENSOCUG00000004962	PAPOLG	100	96.896	ENSMICG00000010042	PAPOLG	100	96.896	Microcebus_murinus
ENSOCUG00000004962	PAPOLG	100	95.142	ENSMOCG00000006857	Papolg	100	95.142	Microtus_ochrogaster
ENSOCUG00000004962	PAPOLG	100	71.391	ENSMMOG00000008020	papolg	99	71.921	Mola_mola
ENSOCUG00000004962	PAPOLG	99	87.534	ENSMODG00000002160	PAPOLG	99	87.534	Monodelphis_domestica
ENSOCUG00000004962	PAPOLG	100	71.713	ENSMALG00000007012	papolg	89	71.713	Monopterus_albus
ENSOCUG00000004962	PAPOLG	100	95.412	MGP_CAROLIEiJ_G0016144	Papolg	99	99.766	Mus_caroli
ENSOCUG00000004962	PAPOLG	100	95.412	ENSMUSG00000020273	Papolg	99	99.766	Mus_musculus
ENSOCUG00000004962	PAPOLG	100	95.277	MGP_PahariEiJ_G0016746	Papolg	100	95.277	Mus_pahari
ENSOCUG00000004962	PAPOLG	100	95.547	MGP_SPRETEiJ_G0016987	Papolg	99	99.766	Mus_spretus
ENSOCUG00000004962	PAPOLG	100	95.547	ENSMPUG00000005165	PAPOLG	90	96.221	Mustela_putorius_furo
ENSOCUG00000004962	PAPOLG	99	94.573	ENSMLUG00000009853	PAPOLG	100	94.573	Myotis_lucifugus
ENSOCUG00000004962	PAPOLG	100	96.221	ENSNGAG00000001120	Papolg	100	96.221	Nannospalax_galili
ENSOCUG00000004962	PAPOLG	99	62.055	ENSNBRG00000011943	papolg	99	63.373	Neolamprologus_brichardi
ENSOCUG00000004962	PAPOLG	58	99.068	ENSNLEG00000009507	-	100	99.068	Nomascus_leucogenys
ENSOCUG00000004962	PAPOLG	81	78.082	ENSMEUG00000013605	-	88	78.082	Notamacropus_eugenii
ENSOCUG00000004962	PAPOLG	100	97.564	ENSOPRG00000009630	PAPOLG	100	97.564	Ochotona_princeps
ENSOCUG00000004962	PAPOLG	58	94.601	ENSODEG00000012424	PAPOLG	100	94.601	Octodon_degus
ENSOCUG00000004962	PAPOLG	100	65.020	ENSONIG00000002985	papolg	100	65.554	Oreochromis_niloticus
ENSOCUG00000004962	PAPOLG	99	86.327	ENSOANG00000012403	PAPOLG	99	86.327	Ornithorhynchus_anatinus
ENSOCUG00000004962	PAPOLG	100	70.000	ENSORLG00000001577	papolg	89	69.709	Oryzias_latipes
ENSOCUG00000004962	PAPOLG	100	70.159	ENSORLG00020002482	papolg	89	70.252	Oryzias_latipes_hni
ENSOCUG00000004962	PAPOLG	100	70.000	ENSORLG00015008836	papolg	89	69.709	Oryzias_latipes_hsok
ENSOCUG00000004962	PAPOLG	100	69.774	ENSOMEG00000001406	papolg	89	69.709	Oryzias_melastigma
ENSOCUG00000004962	PAPOLG	58	90.698	ENSOGAG00000003145	PAPOLG	100	90.698	Otolemur_garnettii
ENSOCUG00000004962	PAPOLG	100	95.412	ENSOARG00000001563	PAPOLG	91	95.412	Ovis_aries
ENSOCUG00000004962	PAPOLG	100	96.356	ENSPPAG00000019917	PAPOLG	100	96.356	Pan_paniscus
ENSOCUG00000004962	PAPOLG	100	95.951	ENSPPRG00000023250	PAPOLG	100	95.951	Panthera_pardus
ENSOCUG00000004962	PAPOLG	100	95.816	ENSPTIG00000018126	PAPOLG	100	95.816	Panthera_tigris_altaica
ENSOCUG00000004962	PAPOLG	100	96.356	ENSPTRG00000011948	PAPOLG	100	96.356	Pan_troglodytes
ENSOCUG00000004962	PAPOLG	100	91.790	ENSPANG00000014543	PAPOLG	100	92.463	Papio_anubis
ENSOCUG00000004962	PAPOLG	100	72.149	ENSPKIG00000003313	papolg	100	72.149	Paramormyrops_kingsleyae
ENSOCUG00000004962	PAPOLG	94	70.323	ENSPKIG00000006027	PAPOLG	99	70.323	Paramormyrops_kingsleyae
ENSOCUG00000004962	PAPOLG	99	79.919	ENSPSIG00000013663	PAPOLG	99	79.919	Pelodiscus_sinensis
ENSOCUG00000004962	PAPOLG	99	94.407	ENSPEMG00000008960	-	100	94.407	Peromyscus_maniculatus_bairdii
ENSOCUG00000004962	PAPOLG	66	63.599	ENSPMAG00000004864	-	96	63.599	Petromyzon_marinus
ENSOCUG00000004962	PAPOLG	99	52.713	ENSPMAG00000002961	papolg	99	52.887	Petromyzon_marinus
ENSOCUG00000004962	PAPOLG	100	87.717	ENSPCIG00000028094	PAPOLG	100	87.717	Phascolarctos_cinereus
ENSOCUG00000004962	PAPOLG	100	68.857	ENSPFOG00000012909	papolg	99	68.947	Poecilia_formosa
ENSOCUG00000004962	PAPOLG	100	68.947	ENSPLAG00000018445	papolg	89	69.160	Poecilia_latipinna
ENSOCUG00000004962	PAPOLG	100	68.766	ENSPMEG00000003961	papolg	89	69.110	Poecilia_mexicana
ENSOCUG00000004962	PAPOLG	78	80.556	ENSPREG00000010358	papolg	89	68.194	Poecilia_reticulata
ENSOCUG00000004962	PAPOLG	100	96.221	ENSPPYG00000012392	PAPOLG	100	96.221	Pongo_abelii
ENSOCUG00000004962	PAPOLG	99	82.313	ENSPCAG00000012297	PAPOLG	100	82.313	Procavia_capensis
ENSOCUG00000004962	PAPOLG	100	85.425	ENSPCOG00000027306	PAPOLG	100	85.425	Propithecus_coquereli
ENSOCUG00000004962	PAPOLG	89	93.794	ENSPVAG00000013541	PAPOLG	89	93.794	Pteropus_vampyrus
ENSOCUG00000004962	PAPOLG	100	70.755	ENSPNYG00000006729	papolg	99	70.485	Pundamilia_nyererei
ENSOCUG00000004962	PAPOLG	100	73.128	ENSPNAG00000015521	papolg	100	73.128	Pygocentrus_nattereri
ENSOCUG00000004962	PAPOLG	100	94.602	ENSRNOG00000006261	Papolg	100	94.602	Rattus_norvegicus
ENSOCUG00000004962	PAPOLG	100	90.688	ENSRBIG00000040086	PAPOLG	100	90.688	Rhinopithecus_bieti
ENSOCUG00000004962	PAPOLG	100	96.626	ENSRROG00000035954	PAPOLG	100	96.626	Rhinopithecus_roxellana
ENSOCUG00000004962	PAPOLG	100	96.356	ENSSBOG00000026194	PAPOLG	100	96.356	Saimiri_boliviensis_boliviensis
ENSOCUG00000004962	PAPOLG	94	87.943	ENSSHAG00000014942	PAPOLG	99	87.943	Sarcophilus_harrisii
ENSOCUG00000004962	PAPOLG	100	63.844	ENSSFOG00015011874	papolg	100	63.844	Scleropages_formosus
ENSOCUG00000004962	PAPOLG	100	69.407	ENSSFOG00015002383	papolg	100	69.407	Scleropages_formosus
ENSOCUG00000004962	PAPOLG	78	80.656	ENSSMAG00000015598	papolg	95	67.166	Scophthalmus_maximus
ENSOCUG00000004962	PAPOLG	100	72.155	ENSSDUG00000000912	papolg	99	70.620	Seriola_dumerili
ENSOCUG00000004962	PAPOLG	100	72.112	ENSSLDG00000001217	papolg	99	67.020	Seriola_lalandi_dorsalis
ENSOCUG00000004962	PAPOLG	100	78.562	ENSSPUG00000007491	PAPOLG	100	78.562	Sphenodon_punctatus
ENSOCUG00000004962	PAPOLG	100	70.081	ENSSPAG00000009004	papolg	99	70.081	Stegastes_partitus
ENSOCUG00000004962	PAPOLG	100	96.626	ENSSSCG00000008389	PAPOLG	100	96.626	Sus_scrofa
ENSOCUG00000004962	PAPOLG	73	77.264	ENSTGUG00000006762	PAPOLG	99	77.264	Taeniopygia_guttata
ENSOCUG00000004962	PAPOLG	100	70.485	ENSTRUG00000006410	papolg	99	70.485	Takifugu_rubripes
ENSOCUG00000004962	PAPOLG	100	66.099	ENSTNIG00000017106	papolg	100	66.099	Tetraodon_nigroviridis
ENSOCUG00000004962	PAPOLG	99	89.116	ENSTBEG00000002609	PAPOLG	100	89.116	Tupaia_belangeri
ENSOCUG00000004962	PAPOLG	100	90.823	ENSTTRG00000006237	PAPOLG	100	91.498	Tursiops_truncatus
ENSOCUG00000004962	PAPOLG	99	95.362	ENSUAMG00000011088	PAPOLG	100	96.044	Ursus_americanus
ENSOCUG00000004962	PAPOLG	99	95.362	ENSUMAG00000019081	PAPOLG	90	96.044	Ursus_maritimus
ENSOCUG00000004962	PAPOLG	99	92.381	ENSVPAG00000000492	PAPOLG	100	92.381	Vicugna_pacos
ENSOCUG00000004962	PAPOLG	100	95.682	ENSVVUG00000010344	PAPOLG	99	96.356	Vulpes_vulpes
ENSOCUG00000004962	PAPOLG	100	74.403	ENSXETG00000002208	papolg	100	74.403	Xenopus_tropicalis
ENSOCUG00000004962	PAPOLG	67	85.170	ENSXCOG00000006611	papolg	73	85.170	Xiphophorus_couchianus
ENSOCUG00000004962	PAPOLG	74	82.600	ENSXMAG00000007383	papolg	95	82.600	Xiphophorus_maculatus