EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000005046 (Gene tree)
Gene ID: 100351462
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 18372 bases
Position: chr1:56534-74905
Accession: 100351462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004372	PRP4	PF08799.11	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005046	PRPF4-201	3404	XM_002708123	ENSOCUP00000004372	521 (aa)	XP_002708169	G1SN37

Gene Model

Click here to download ENSOCUG00000005046's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000005046	PRPF4	56	31.852	ENSOCUG00000002080	POC1A	70	31.852
ENSOCUG00000005046	PRPF4	56	31.884	ENSOCUG00000017330	-	79	31.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005046	PRPF4	100	99.424	ENSG00000136875	PRPF4	100	99.424	Homo_sapiens
ENSOCUG00000005046	PRPF4	96	77.615	ENSAPOG00000014132	prpf4	98	77.615	Acanthochromis_polyacanthus
ENSOCUG00000005046	PRPF4	100	99.616	ENSAMEG00000013048	PRPF4	98	99.616	Ailuropoda_melanoleuca
ENSOCUG00000005046	PRPF4	96	77.381	ENSACIG00000005579	prpf4	99	77.381	Amphilophus_citrinellus
ENSOCUG00000005046	PRPF4	96	77.030	ENSAOCG00000005457	prpf4	99	77.030	Amphiprion_ocellaris
ENSOCUG00000005046	PRPF4	96	76.832	ENSAPEG00000000776	prpf4	99	76.832	Amphiprion_percula
ENSOCUG00000005046	PRPF4	96	76.786	ENSATEG00000023013	prpf4	99	76.786	Anabas_testudineus
ENSOCUG00000005046	PRPF4	100	89.443	ENSAPLG00000006534	PRPF4	97	89.443	Anas_platyrhynchos
ENSOCUG00000005046	PRPF4	100	90.249	ENSACAG00000015110	PRPF4	100	90.249	Anolis_carolinensis
ENSOCUG00000005046	PRPF4	100	99.808	ENSANAG00000022464	PRPF4	96	99.808	Aotus_nancymaae
ENSOCUG00000005046	PRPF4	96	77.183	ENSACLG00000019031	prpf4	99	77.183	Astatotilapia_calliptera
ENSOCUG00000005046	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.267	Astyanax_mexicanus
ENSOCUG00000005046	PRPF4	100	98.848	ENSBTAG00000004571	PRPF4	100	98.848	Bos_taurus
ENSOCUG00000005046	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSOCUG00000005046	PRPF4	100	99.617	ENSCJAG00000017856	PRPF4	100	99.617	Callithrix_jacchus
ENSOCUG00000005046	PRPF4	100	99.616	ENSCAFG00000003224	PRPF4	97	99.616	Canis_familiaris
ENSOCUG00000005046	PRPF4	100	99.616	ENSCAFG00020022637	PRPF4	100	99.616	Canis_lupus_dingo
ENSOCUG00000005046	PRPF4	100	99.042	ENSCHIG00000024648	-	100	99.042	Capra_hircus
ENSOCUG00000005046	PRPF4	100	99.424	ENSTSYG00000010366	PRPF4	100	99.424	Carlito_syrichta
ENSOCUG00000005046	PRPF4	88	88.305	ENSCAPG00000008935	PRPF4	97	88.305	Cavia_aperea
ENSOCUG00000005046	PRPF4	100	99.040	ENSCPOG00000010747	-	100	99.040	Cavia_porcellus
ENSOCUG00000005046	PRPF4	100	92.514	ENSCPOG00000014729	-	100	92.514	Cavia_porcellus
ENSOCUG00000005046	PRPF4	100	99.616	ENSCCAG00000028990	PRPF4	100	99.616	Cebus_capucinus
ENSOCUG00000005046	PRPF4	100	99.424	ENSCATG00000021552	PRPF4	100	99.424	Cercocebus_atys
ENSOCUG00000005046	PRPF4	100	99.232	ENSCLAG00000013448	PRPF4	100	99.232	Chinchilla_lanigera
ENSOCUG00000005046	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSOCUG00000005046	PRPF4	99	91.650	ENSCPBG00000019136	PRPF4	74	91.650	Chrysemys_picta_bellii
ENSOCUG00000005046	PRPF4	96	59.449	ENSCING00000001299	-	97	58.812	Ciona_intestinalis
ENSOCUG00000005046	PRPF4	96	57.738	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSOCUG00000005046	PRPF4	100	99.616	ENSCANG00000003246	PRPF4	100	99.616	Colobus_angolensis_palliatus
ENSOCUG00000005046	PRPF4	100	99.424	ENSCGRG00001016992	Prpf4	100	99.424	Cricetulus_griseus_chok1gshd
ENSOCUG00000005046	PRPF4	100	99.424	ENSCGRG00000017560	Prpf4	100	99.424	Cricetulus_griseus_crigri
ENSOCUG00000005046	PRPF4	97	76.040	ENSCSEG00000020451	prpf4	99	76.040	Cynoglossus_semilaevis
ENSOCUG00000005046	PRPF4	97	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSOCUG00000005046	PRPF4	100	99.042	ENSDNOG00000013203	PRPF4	100	99.042	Dasypus_novemcinctus
ENSOCUG00000005046	PRPF4	100	99.808	ENSDORG00000026275	Prpf4	100	99.808	Dipodomys_ordii
ENSOCUG00000005046	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSOCUG00000005046	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSOCUG00000005046	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSOCUG00000005046	PRPF4	100	99.808	ENSEASG00005022678	PRPF4	100	99.808	Equus_asinus_asinus
ENSOCUG00000005046	PRPF4	100	99.808	ENSECAG00000007072	PRPF4	100	99.808	Equus_caballus
ENSOCUG00000005046	PRPF4	100	78.384	ENSEEUG00000007480	PRPF4	100	78.384	Erinaceus_europaeus
ENSOCUG00000005046	PRPF4	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSOCUG00000005046	PRPF4	100	99.617	ENSFCAG00000005514	PRPF4	100	99.617	Felis_catus
ENSOCUG00000005046	PRPF4	98	88.565	ENSFALG00000005423	PRPF4	90	85.806	Ficedula_albicollis
ENSOCUG00000005046	PRPF4	100	99.040	ENSFDAG00000005839	PRPF4	100	99.040	Fukomys_damarensis
ENSOCUG00000005046	PRPF4	96	76.389	ENSFHEG00000001300	prpf4	99	76.389	Fundulus_heteroclitus
ENSOCUG00000005046	PRPF4	98	90.411	ENSGALG00000008857	PRPF4	96	89.729	Gallus_gallus
ENSOCUG00000005046	PRPF4	65	71.471	ENSGAFG00000012164	prpf4	70	71.471	Gambusia_affinis
ENSOCUG00000005046	PRPF4	96	69.841	ENSGACG00000015476	prpf4	99	69.048	Gasterosteus_aculeatus
ENSOCUG00000005046	PRPF4	99	91.456	ENSGAGG00000025029	PRPF4	95	91.456	Gopherus_agassizii
ENSOCUG00000005046	PRPF4	100	99.424	ENSGGOG00000006943	PRPF4	100	99.424	Gorilla_gorilla
ENSOCUG00000005046	PRPF4	96	76.984	ENSHBUG00000000562	prpf4	99	76.984	Haplochromis_burtoni
ENSOCUG00000005046	PRPF4	100	80.422	ENSHGLG00000003838	-	100	80.422	Heterocephalus_glaber_female
ENSOCUG00000005046	PRPF4	100	99.040	ENSHGLG00000015191	PRPF4	100	99.040	Heterocephalus_glaber_female
ENSOCUG00000005046	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSOCUG00000005046	PRPF4	100	80.422	ENSHGLG00100005571	-	100	80.422	Heterocephalus_glaber_male
ENSOCUG00000005046	PRPF4	97	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSOCUG00000005046	PRPF4	100	99.232	ENSSTOG00000027833	PRPF4	100	99.232	Ictidomys_tridecemlineatus
ENSOCUG00000005046	PRPF4	100	99.424	ENSJJAG00000008838	Prpf4	100	99.424	Jaculus_jaculus
ENSOCUG00000005046	PRPF4	96	76.389	ENSKMAG00000013236	prpf4	99	76.389	Kryptolebias_marmoratus
ENSOCUG00000005046	PRPF4	96	76.096	ENSLBEG00000020611	prpf4	99	76.096	Labrus_bergylta
ENSOCUG00000005046	PRPF4	99	80.154	ENSLACG00000016317	PRPF4	99	80.154	Latimeria_chalumnae
ENSOCUG00000005046	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSOCUG00000005046	PRPF4	100	98.851	ENSLAFG00000018225	PRPF4	100	98.851	Loxodonta_africana
ENSOCUG00000005046	PRPF4	100	99.232	ENSMFAG00000039397	PRPF4	100	99.232	Macaca_fascicularis
ENSOCUG00000005046	PRPF4	100	99.424	ENSMMUG00000005844	PRPF4	100	99.424	Macaca_mulatta
ENSOCUG00000005046	PRPF4	100	88.676	ENSMNEG00000033737	PRPF4	100	88.676	Macaca_nemestrina
ENSOCUG00000005046	PRPF4	100	99.424	ENSMLEG00000040284	PRPF4	100	99.424	Mandrillus_leucophaeus
ENSOCUG00000005046	PRPF4	97	76.331	ENSMAMG00000020141	prpf4	99	76.331	Mastacembelus_armatus
ENSOCUG00000005046	PRPF4	96	77.183	ENSMZEG00005023205	prpf4	99	77.183	Maylandia_zebra
ENSOCUG00000005046	PRPF4	99	88.654	ENSMGAG00000001796	PRPF4	97	88.654	Meleagris_gallopavo
ENSOCUG00000005046	PRPF4	100	98.848	ENSMAUG00000018022	Prpf4	100	98.848	Mesocricetus_auratus
ENSOCUG00000005046	PRPF4	100	98.656	ENSMICG00000015022	PRPF4	100	98.467	Microcebus_murinus
ENSOCUG00000005046	PRPF4	100	98.848	ENSMOCG00000018273	Prpf4	100	98.848	Microtus_ochrogaster
ENSOCUG00000005046	PRPF4	97	75.050	ENSMMOG00000021177	prpf4	99	75.050	Mola_mola
ENSOCUG00000005046	PRPF4	100	95.411	ENSMODG00000025096	-	97	95.411	Monodelphis_domestica
ENSOCUG00000005046	PRPF4	100	95.220	ENSMODG00000004444	-	100	95.220	Monodelphis_domestica
ENSOCUG00000005046	PRPF4	96	76.786	ENSMALG00000013624	prpf4	99	76.786	Monopterus_albus
ENSOCUG00000005046	PRPF4	100	99.232	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.232	Mus_caroli
ENSOCUG00000005046	PRPF4	100	99.232	ENSMUSG00000066148	Prpf4	100	99.232	Mus_musculus
ENSOCUG00000005046	PRPF4	100	99.040	MGP_PahariEiJ_G0028413	Prpf4	100	99.040	Mus_pahari
ENSOCUG00000005046	PRPF4	100	99.232	MGP_SPRETEiJ_G0027042	Prpf4	100	99.232	Mus_spretus
ENSOCUG00000005046	PRPF4	100	99.616	ENSMPUG00000007883	PRPF4	100	99.616	Mustela_putorius_furo
ENSOCUG00000005046	PRPF4	100	99.232	ENSMLUG00000015309	-	97	99.232	Myotis_lucifugus
ENSOCUG00000005046	PRPF4	100	97.313	ENSMLUG00000008626	-	97	97.313	Myotis_lucifugus
ENSOCUG00000005046	PRPF4	100	94.050	ENSNGAG00000000468	Prpf4	100	94.050	Nannospalax_galili
ENSOCUG00000005046	PRPF4	96	77.381	ENSNBRG00000007972	prpf4	99	77.381	Neolamprologus_brichardi
ENSOCUG00000005046	PRPF4	100	99.808	ENSNLEG00000016647	PRPF4	100	99.808	Nomascus_leucogenys
ENSOCUG00000005046	PRPF4	99	95.331	ENSMEUG00000013256	PRPF4	100	95.331	Notamacropus_eugenii
ENSOCUG00000005046	PRPF4	100	99.234	ENSOPRG00000005302	PRPF4	100	99.234	Ochotona_princeps
ENSOCUG00000005046	PRPF4	100	99.424	ENSODEG00000018147	PRPF4	100	99.424	Octodon_degus
ENSOCUG00000005046	PRPF4	99	75.479	ENSONIG00000012671	prpf4	99	77.183	Oreochromis_niloticus
ENSOCUG00000005046	PRPF4	96	75.100	ENSORLG00000019641	prpf4	99	75.100	Oryzias_latipes
ENSOCUG00000005046	PRPF4	96	75.100	ENSORLG00020019438	prpf4	99	75.100	Oryzias_latipes_hni
ENSOCUG00000005046	PRPF4	96	74.947	ENSOMEG00000020941	prpf4	99	74.947	Oryzias_melastigma
ENSOCUG00000005046	PRPF4	100	94.434	ENSOGAG00000007802	PRPF4	98	94.434	Otolemur_garnettii
ENSOCUG00000005046	PRPF4	100	99.232	ENSOARG00000006319	PRPF4	97	99.232	Ovis_aries
ENSOCUG00000005046	PRPF4	100	99.424	ENSPPAG00000041797	PRPF4	100	99.424	Pan_paniscus
ENSOCUG00000005046	PRPF4	100	99.808	ENSPPRG00000014360	PRPF4	100	99.808	Panthera_pardus
ENSOCUG00000005046	PRPF4	100	99.808	ENSPTIG00000009574	PRPF4	100	99.808	Panthera_tigris_altaica
ENSOCUG00000005046	PRPF4	100	99.424	ENSPTRG00000021274	PRPF4	100	99.234	Pan_troglodytes
ENSOCUG00000005046	PRPF4	100	99.232	ENSPANG00000025776	PRPF4	96	99.232	Papio_anubis
ENSOCUG00000005046	PRPF4	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSOCUG00000005046	PRPF4	100	90.019	ENSPSIG00000010713	PRPF4	91	90.541	Pelodiscus_sinensis
ENSOCUG00000005046	PRPF4	99	58.791	ENSPMGG00000000997	prpf4	99	58.899	Periophthalmus_magnuspinnatus
ENSOCUG00000005046	PRPF4	100	99.424	ENSPEMG00000024115	Prpf4	100	99.424	Peromyscus_maniculatus_bairdii
ENSOCUG00000005046	PRPF4	99	95.331	ENSPCIG00000003821	PRPF4	99	95.331	Phascolarctos_cinereus
ENSOCUG00000005046	PRPF4	96	70.217	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSOCUG00000005046	PRPF4	83	71.865	ENSPLAG00000011620	prpf4	96	72.360	Poecilia_latipinna
ENSOCUG00000005046	PRPF4	92	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSOCUG00000005046	PRPF4	98	99.220	ENSPCAG00000002561	PRPF4	99	99.220	Procavia_capensis
ENSOCUG00000005046	PRPF4	100	99.232	ENSPCOG00000011975	PRPF4	100	99.232	Propithecus_coquereli
ENSOCUG00000005046	PRPF4	100	95.594	ENSPVAG00000004708	PRPF4	100	95.594	Pteropus_vampyrus
ENSOCUG00000005046	PRPF4	96	77.183	ENSPNYG00000008013	prpf4	99	77.183	Pundamilia_nyererei
ENSOCUG00000005046	PRPF4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSOCUG00000005046	PRPF4	100	99.040	ENSRNOG00000014777	Prpf4	100	99.040	Rattus_norvegicus
ENSOCUG00000005046	PRPF4	100	99.616	ENSRBIG00000040221	PRPF4	100	99.616	Rhinopithecus_bieti
ENSOCUG00000005046	PRPF4	100	99.616	ENSRROG00000040240	PRPF4	100	99.616	Rhinopithecus_roxellana
ENSOCUG00000005046	PRPF4	100	95.793	ENSSHAG00000017658	PRPF4	100	95.793	Sarcophilus_harrisii
ENSOCUG00000005046	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSOCUG00000005046	PRPF4	96	75.794	ENSSMAG00000008889	prpf4	99	75.794	Scophthalmus_maximus
ENSOCUG00000005046	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSOCUG00000005046	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSOCUG00000005046	PRPF4	100	90.787	ENSSPUG00000015582	PRPF4	100	90.787	Sphenodon_punctatus
ENSOCUG00000005046	PRPF4	96	71.400	ENSSPAG00000011286	prpf4	99	71.400	Stegastes_partitus
ENSOCUG00000005046	PRPF4	100	99.808	ENSSSCG00000024648	PRPF4	100	99.808	Sus_scrofa
ENSOCUG00000005046	PRPF4	95	90.669	ENSTGUG00000002623	PRPF4	100	91.002	Taeniopygia_guttata
ENSOCUG00000005046	PRPF4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSOCUG00000005046	PRPF4	97	75.050	ENSTNIG00000013250	prpf4	99	75.050	Tetraodon_nigroviridis
ENSOCUG00000005046	PRPF4	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSOCUG00000005046	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSOCUG00000005046	PRPF4	64	96.407	ENSUAMG00000018288	PRPF4	90	96.407	Ursus_americanus
ENSOCUG00000005046	PRPF4	100	98.848	ENSUMAG00000019375	PRPF4	100	98.848	Ursus_maritimus
ENSOCUG00000005046	PRPF4	100	99.042	ENSVPAG00000005281	PRPF4	100	99.042	Vicugna_pacos
ENSOCUG00000005046	PRPF4	100	98.476	ENSVVUG00000002476	PRPF4	100	98.476	Vulpes_vulpes
ENSOCUG00000005046	PRPF4	69	58.333	ENSXCOG00000006101	prpf4	93	59.606	Xiphophorus_couchianus
ENSOCUG00000005046	PRPF4	88	64.629	ENSXMAG00000002750	prpf4	98	65.606	Xiphophorus_maculatus