EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000005168 (Gene tree)
Gene ID: 100354691
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 16605 bases
Position: chr12:1317315-1333919
Accession: 100354691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004475	zf-U11-48K	PF05253.12	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005165	SNRNP48-201	1343	XM_008262352	ENSOCUP00000004475	303 (aa)	XP_008260574	G1SNC1

Gene Model

Click here to download ENSOCUG00000005168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005168	SNRNP48	100	90.461	ENSG00000168566	SNRNP48	84	90.909	Homo_sapiens
ENSOCUG00000005168	SNRNP48	91	47.222	ENSAPOG00000021430	snrnp48	79	47.080	Acanthochromis_polyacanthus
ENSOCUG00000005168	SNRNP48	100	86.262	ENSAMEG00000017349	SNRNP48	85	85.424	Ailuropoda_melanoleuca
ENSOCUG00000005168	SNRNP48	92	45.390	ENSACIG00000002032	snrnp48	78	45.318	Amphilophus_citrinellus
ENSOCUG00000005168	SNRNP48	90	47.350	ENSAOCG00000010562	snrnp48	79	47.080	Amphiprion_ocellaris
ENSOCUG00000005168	SNRNP48	90	47.331	ENSAPEG00000003231	snrnp48	79	47.059	Amphiprion_percula
ENSOCUG00000005168	SNRNP48	87	49.638	ENSATEG00000020210	snrnp48	80	48.921	Anabas_testudineus
ENSOCUG00000005168	SNRNP48	82	66.667	ENSACAG00000002811	SNRNP48	77	66.260	Anolis_carolinensis
ENSOCUG00000005168	SNRNP48	100	90.132	ENSANAG00000033538	SNRNP48	84	90.559	Aotus_nancymaae
ENSOCUG00000005168	SNRNP48	92	47.735	ENSAMXG00000015309	snrnp48	80	47.080	Astyanax_mexicanus
ENSOCUG00000005168	SNRNP48	100	85.574	ENSBTAG00000001123	SNRNP48	84	86.411	Bos_taurus
ENSOCUG00000005168	SNRNP48	100	90.132	ENSCJAG00000021330	SNRNP48	84	90.909	Callithrix_jacchus
ENSOCUG00000005168	SNRNP48	99	88.372	ENSCAFG00000009574	SNRNP48	70	88.811	Canis_familiaris
ENSOCUG00000005168	SNRNP48	99	88.449	ENSCAFG00020013203	SNRNP48	84	88.811	Canis_lupus_dingo
ENSOCUG00000005168	SNRNP48	100	86.557	ENSCHIG00000015216	SNRNP48	84	87.108	Capra_hircus
ENSOCUG00000005168	SNRNP48	96	89.041	ENSTSYG00000000698	SNRNP48	84	89.510	Carlito_syrichta
ENSOCUG00000005168	SNRNP48	89	85.348	ENSCAPG00000006768	SNRNP48	89	84.559	Cavia_aperea
ENSOCUG00000005168	SNRNP48	100	87.500	ENSCPOG00000007910	SNRNP48	84	88.112	Cavia_porcellus
ENSOCUG00000005168	SNRNP48	100	88.816	ENSCCAG00000035652	SNRNP48	84	89.510	Cebus_capucinus
ENSOCUG00000005168	SNRNP48	100	90.132	ENSCATG00000033947	SNRNP48	84	90.559	Cercocebus_atys
ENSOCUG00000005168	SNRNP48	100	87.500	ENSCLAG00000003765	SNRNP48	84	88.112	Chinchilla_lanigera
ENSOCUG00000005168	SNRNP48	100	90.461	ENSCSAG00000007409	SNRNP48	84	90.909	Chlorocebus_sabaeus
ENSOCUG00000005168	SNRNP48	83	65.056	ENSCPBG00000019146	SNRNP48	78	65.339	Chrysemys_picta_bellii
ENSOCUG00000005168	SNRNP48	100	90.461	ENSCANG00000030017	SNRNP48	84	90.909	Colobus_angolensis_palliatus
ENSOCUG00000005168	SNRNP48	99	70.199	ENSCGRG00001008805	-	80	73.585	Cricetulus_griseus_chok1gshd
ENSOCUG00000005168	SNRNP48	100	87.500	ENSCGRG00001001076	-	85	87.762	Cricetulus_griseus_chok1gshd
ENSOCUG00000005168	SNRNP48	100	87.500	ENSCGRG00000007781	Snrnp48	85	87.762	Cricetulus_griseus_crigri
ENSOCUG00000005168	SNRNP48	85	48.659	ENSCSEG00000000722	snrnp48	74	47.037	Cynoglossus_semilaevis
ENSOCUG00000005168	SNRNP48	99	44.728	ENSCVAG00000019829	snrnp48	62	49.194	Cyprinodon_variegatus
ENSOCUG00000005168	SNRNP48	91	44.128	ENSDARG00000039989	snrnp48	80	43.841	Danio_rerio
ENSOCUG00000005168	SNRNP48	100	88.525	ENSDNOG00000014978	SNRNP48	84	89.895	Dasypus_novemcinctus
ENSOCUG00000005168	SNRNP48	100	86.885	ENSDORG00000015140	Snrnp48	84	87.456	Dipodomys_ordii
ENSOCUG00000005168	SNRNP48	100	88.487	ENSEASG00005012021	SNRNP48	84	89.510	Equus_asinus_asinus
ENSOCUG00000005168	SNRNP48	100	88.816	ENSECAG00000026937	SNRNP48	84	89.510	Equus_caballus
ENSOCUG00000005168	SNRNP48	100	68.852	ENSEEUG00000015437	SNRNP48	90	68.852	Erinaceus_europaeus
ENSOCUG00000005168	SNRNP48	100	47.284	ENSELUG00000009766	snrnp48	75	48.897	Esox_lucius
ENSOCUG00000005168	SNRNP48	100	89.145	ENSFCAG00000018853	SNRNP48	84	89.860	Felis_catus
ENSOCUG00000005168	SNRNP48	80	69.170	ENSFALG00000007797	SNRNP48	82	69.261	Ficedula_albicollis
ENSOCUG00000005168	SNRNP48	96	87.629	ENSFDAG00000009231	SNRNP48	81	88.278	Fukomys_damarensis
ENSOCUG00000005168	SNRNP48	66	55.446	ENSFHEG00000014647	snrnp48	82	51.681	Fundulus_heteroclitus
ENSOCUG00000005168	SNRNP48	81	47.177	ENSGMOG00000018599	-	77	47.266	Gadus_morhua
ENSOCUG00000005168	SNRNP48	83	68.821	ENSGALG00000013005	SNRNP48	83	69.796	Gallus_gallus
ENSOCUG00000005168	SNRNP48	83	49.609	ENSGAFG00000021639	snrnp48	79	47.101	Gambusia_affinis
ENSOCUG00000005168	SNRNP48	80	50.813	ENSGACG00000017756	-	83	47.368	Gasterosteus_aculeatus
ENSOCUG00000005168	SNRNP48	83	64.794	ENSGAGG00000000865	SNRNP48	81	64.940	Gopherus_agassizii
ENSOCUG00000005168	SNRNP48	100	90.461	ENSGGOG00000013220	SNRNP48	84	90.909	Gorilla_gorilla
ENSOCUG00000005168	SNRNP48	84	47.893	ENSHBUG00000017066	snrnp48	78	46.715	Haplochromis_burtoni
ENSOCUG00000005168	SNRNP48	100	87.829	ENSHGLG00000015241	SNRNP48	84	88.462	Heterocephalus_glaber_female
ENSOCUG00000005168	SNRNP48	100	87.829	ENSHGLG00100010027	SNRNP48	84	88.462	Heterocephalus_glaber_male
ENSOCUG00000005168	SNRNP48	82	44.622	ENSHCOG00000014066	snrnp48	79	43.011	Hippocampus_comes
ENSOCUG00000005168	SNRNP48	100	90.461	ENSSTOG00000014635	SNRNP48	84	90.909	Ictidomys_tridecemlineatus
ENSOCUG00000005168	SNRNP48	100	83.882	ENSJJAG00000011495	Snrnp48	84	84.615	Jaculus_jaculus
ENSOCUG00000005168	SNRNP48	92	45.196	ENSKMAG00000016514	snrnp48	77	45.185	Kryptolebias_marmoratus
ENSOCUG00000005168	SNRNP48	85	48.659	ENSLBEG00000026249	snrnp48	79	47.080	Labrus_bergylta
ENSOCUG00000005168	SNRNP48	97	57.143	ENSLACG00000003958	SNRNP48	82	55.439	Latimeria_chalumnae
ENSOCUG00000005168	SNRNP48	93	51.557	ENSLOCG00000004187	snrnp48	81	50.896	Lepisosteus_oculatus
ENSOCUG00000005168	SNRNP48	98	89.298	ENSLAFG00000011152	SNRNP48	84	89.510	Loxodonta_africana
ENSOCUG00000005168	SNRNP48	100	90.789	ENSMFAG00000045216	SNRNP48	84	91.259	Macaca_fascicularis
ENSOCUG00000005168	SNRNP48	100	90.789	ENSMMUG00000014785	SNRNP48	84	91.259	Macaca_mulatta
ENSOCUG00000005168	SNRNP48	100	91.118	ENSMNEG00000042269	SNRNP48	84	91.608	Macaca_nemestrina
ENSOCUG00000005168	SNRNP48	100	90.789	ENSMLEG00000034004	SNRNP48	84	91.259	Mandrillus_leucophaeus
ENSOCUG00000005168	SNRNP48	85	47.692	ENSMAMG00000018673	snrnp48	69	47.037	Mastacembelus_armatus
ENSOCUG00000005168	SNRNP48	81	69.231	ENSMGAG00000006037	SNRNP48	83	69.106	Meleagris_gallopavo
ENSOCUG00000005168	SNRNP48	100	88.487	ENSMAUG00000011944	Snrnp48	85	88.811	Mesocricetus_auratus
ENSOCUG00000005168	SNRNP48	100	89.145	ENSMICG00000012497	SNRNP48	84	89.510	Microcebus_murinus
ENSOCUG00000005168	SNRNP48	100	88.816	ENSMOCG00000015555	Snrnp48	85	89.161	Microtus_ochrogaster
ENSOCUG00000005168	SNRNP48	60	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSOCUG00000005168	SNRNP48	94	71.141	ENSMODG00000009996	SNRNP48	77	70.775	Monodelphis_domestica
ENSOCUG00000005168	SNRNP48	83	51.181	ENSMALG00000005725	snrnp48	78	47.653	Monopterus_albus
ENSOCUG00000005168	SNRNP48	100	87.500	MGP_CAROLIEiJ_G0018441	Snrnp48	85	87.762	Mus_caroli
ENSOCUG00000005168	SNRNP48	100	86.513	ENSMUSG00000021431	Snrnp48	85	86.713	Mus_musculus
ENSOCUG00000005168	SNRNP48	100	87.500	MGP_PahariEiJ_G0019509	Snrnp48	85	87.762	Mus_pahari
ENSOCUG00000005168	SNRNP48	100	86.842	MGP_SPRETEiJ_G0019321	Snrnp48	85	87.063	Mus_spretus
ENSOCUG00000005168	SNRNP48	100	87.500	ENSNGAG00000004849	Snrnp48	84	88.112	Nannospalax_galili
ENSOCUG00000005168	SNRNP48	84	47.510	ENSNBRG00000012127	snrnp48	78	45.985	Neolamprologus_brichardi
ENSOCUG00000005168	SNRNP48	100	90.789	ENSNLEG00000011667	SNRNP48	84	91.259	Nomascus_leucogenys
ENSOCUG00000005168	SNRNP48	96	83.103	ENSOPRG00000015471	SNRNP48	85	83.456	Ochotona_princeps
ENSOCUG00000005168	SNRNP48	84	47.893	ENSONIG00000001520	snrnp48	78	46.350	Oreochromis_niloticus
ENSOCUG00000005168	SNRNP48	63	60.577	ENSOANG00000019888	-	94	61.538	Ornithorhynchus_anatinus
ENSOCUG00000005168	SNRNP48	99	46.753	ENSORLG00000015654	snrnp48	78	48.000	Oryzias_latipes
ENSOCUG00000005168	SNRNP48	99	46.104	ENSORLG00020015976	snrnp48	66	47.273	Oryzias_latipes_hni
ENSOCUG00000005168	SNRNP48	99	47.078	ENSORLG00015022379	snrnp48	67	48.364	Oryzias_latipes_hsok
ENSOCUG00000005168	SNRNP48	92	46.875	ENSOMEG00000022007	snrnp48	78	47.445	Oryzias_melastigma
ENSOCUG00000005168	SNRNP48	98	88.552	ENSOGAG00000005275	SNRNP48	86	89.123	Otolemur_garnettii
ENSOCUG00000005168	SNRNP48	83	87.698	ENSOARG00000017319	SNRNP48	87	87.600	Ovis_aries
ENSOCUG00000005168	SNRNP48	100	90.789	ENSPPAG00000032873	SNRNP48	84	91.259	Pan_paniscus
ENSOCUG00000005168	SNRNP48	100	88.816	ENSPPRG00000004283	SNRNP48	84	89.510	Panthera_pardus
ENSOCUG00000005168	SNRNP48	83	90.079	ENSPTIG00000013502	SNRNP48	87	90.400	Panthera_tigris_altaica
ENSOCUG00000005168	SNRNP48	100	90.789	ENSPTRG00000017703	SNRNP48	84	91.259	Pan_troglodytes
ENSOCUG00000005168	SNRNP48	100	90.789	ENSPANG00000000771	SNRNP48	84	91.259	Papio_anubis
ENSOCUG00000005168	SNRNP48	94	47.588	ENSPKIG00000013703	snrnp48	58	49.286	Paramormyrops_kingsleyae
ENSOCUG00000005168	SNRNP48	83	63.806	ENSPSIG00000002213	SNRNP48	79	64.800	Pelodiscus_sinensis
ENSOCUG00000005168	SNRNP48	80	48.583	ENSPMGG00000008120	snrnp48	85	48.163	Periophthalmus_magnuspinnatus
ENSOCUG00000005168	SNRNP48	100	88.816	ENSPEMG00000008872	Snrnp48	85	89.161	Peromyscus_maniculatus_bairdii
ENSOCUG00000005168	SNRNP48	83	50.781	ENSPFOG00000003578	snrnp48	79	48.188	Poecilia_formosa
ENSOCUG00000005168	SNRNP48	76	50.000	ENSPLAG00000002290	snrnp48	75	50.673	Poecilia_latipinna
ENSOCUG00000005168	SNRNP48	83	50.000	ENSPMEG00000018033	snrnp48	79	47.464	Poecilia_mexicana
ENSOCUG00000005168	SNRNP48	82	50.199	ENSPREG00000018541	snrnp48	79	48.188	Poecilia_reticulata
ENSOCUG00000005168	SNRNP48	100	89.474	ENSPPYG00000016209	SNRNP48	84	89.860	Pongo_abelii
ENSOCUG00000005168	SNRNP48	86	72.519	ENSPCAG00000011991	SNRNP48	93	71.486	Procavia_capensis
ENSOCUG00000005168	SNRNP48	100	87.500	ENSPVAG00000002854	SNRNP48	84	88.811	Pteropus_vampyrus
ENSOCUG00000005168	SNRNP48	84	48.276	ENSPNYG00000015399	snrnp48	86	47.080	Pundamilia_nyererei
ENSOCUG00000005168	SNRNP48	100	87.829	ENSRNOG00000013756	Snrnp48	85	88.112	Rattus_norvegicus
ENSOCUG00000005168	SNRNP48	100	90.789	ENSRBIG00000043856	SNRNP48	91	91.259	Rhinopithecus_bieti
ENSOCUG00000005168	SNRNP48	100	90.461	ENSRROG00000043229	SNRNP48	84	90.909	Rhinopithecus_roxellana
ENSOCUG00000005168	SNRNP48	100	90.461	ENSSBOG00000019486	SNRNP48	84	90.909	Saimiri_boliviensis_boliviensis
ENSOCUG00000005168	SNRNP48	94	71.477	ENSSHAG00000014483	SNRNP48	82	72.028	Sarcophilus_harrisii
ENSOCUG00000005168	SNRNP48	82	50.397	ENSSFOG00015006610	snrnp48	67	48.410	Scleropages_formosus
ENSOCUG00000005168	SNRNP48	94	47.059	ENSSDUG00000014953	snrnp48	78	47.426	Seriola_dumerili
ENSOCUG00000005168	SNRNP48	88	48.551	ENSSLDG00000005989	snrnp48	78	47.794	Seriola_lalandi_dorsalis
ENSOCUG00000005168	SNRNP48	83	66.667	ENSSPUG00000006257	SNRNP48	71	66.935	Sphenodon_punctatus
ENSOCUG00000005168	SNRNP48	89	46.953	ENSSPAG00000006454	snrnp48	79	47.080	Stegastes_partitus
ENSOCUG00000005168	SNRNP48	82	68.605	ENSTGUG00000007575	SNRNP48	82	68.750	Taeniopygia_guttata
ENSOCUG00000005168	SNRNP48	79	51.029	ENSTRUG00000007031	snrnp48	79	49.815	Takifugu_rubripes
ENSOCUG00000005168	SNRNP48	84	46.360	ENSTNIG00000012977	-	71	47.718	Tetraodon_nigroviridis
ENSOCUG00000005168	SNRNP48	87	87.218	ENSTBEG00000015620	SNRNP48	73	87.903	Tupaia_belangeri
ENSOCUG00000005168	SNRNP48	100	87.829	ENSTTRG00000016715	SNRNP48	84	88.112	Tursiops_truncatus
ENSOCUG00000005168	SNRNP48	100	89.474	ENSUAMG00000003690	SNRNP48	84	88.811	Ursus_americanus
ENSOCUG00000005168	SNRNP48	83	88.095	ENSVPAG00000003557	SNRNP48	87	88.000	Vicugna_pacos
ENSOCUG00000005168	SNRNP48	99	87.789	ENSVVUG00000004996	SNRNP48	84	88.112	Vulpes_vulpes
ENSOCUG00000005168	SNRNP48	95	53.356	ENSXETG00000020447	snrnp48	79	52.920	Xenopus_tropicalis
ENSOCUG00000005168	SNRNP48	77	49.362	ENSXCOG00000004478	snrnp48	67	50.000	Xiphophorus_couchianus
ENSOCUG00000005168	SNRNP48	93	47.887	ENSXMAG00000013595	snrnp48	79	47.464	Xiphophorus_maculatus