EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000005333 (Gene tree)
Gene ID: 100355085
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 369 bases
Position: chrGL018704:1993194-1993562
Accession: 100355085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020124	LSM	PF01423.22	8.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005329	LSM10-201	369	-	ENSOCUP00000020124	123 (aa)	XP_008271886	G1TSV5

Gene Model

Click here to download ENSOCUG00000005333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000005333	LSM10	55	31.429	ENSOCUG00000002583	LSM2	74	31.429
ENSOCUG00000005333	LSM10	60	32.432	ENSOCUG00000014399	-	62	32.432
ENSOCUG00000005333	LSM10	58	33.803	ENSOCUG00000023761	-	52	36.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005333	LSM10	100	90.244	ENSG00000181817	LSM10	100	90.244	Homo_sapiens
ENSOCUG00000005333	LSM10	100	88.618	ENSAMEG00000019854	LSM10	100	88.618	Ailuropoda_melanoleuca
ENSOCUG00000005333	LSM10	94	66.379	ENSACIG00000015420	oscp1a	77	66.379	Amphilophus_citrinellus
ENSOCUG00000005333	LSM10	90	63.964	ENSAOCG00000015607	LSM10	86	63.964	Amphiprion_ocellaris
ENSOCUG00000005333	LSM10	96	66.949	ENSAOCG00000015618	LSM10	98	66.949	Amphiprion_ocellaris
ENSOCUG00000005333	LSM10	96	66.949	ENSAOCG00000014654	-	98	66.949	Amphiprion_ocellaris
ENSOCUG00000005333	LSM10	96	66.949	ENSAPEG00000021845	-	98	66.949	Amphiprion_percula
ENSOCUG00000005333	LSM10	90	63.964	ENSAPEG00000021851	LSM10	86	63.964	Amphiprion_percula
ENSOCUG00000005333	LSM10	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSOCUG00000005333	LSM10	100	68.293	ENSACAG00000001231	LSM10	100	68.293	Anolis_carolinensis
ENSOCUG00000005333	LSM10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSOCUG00000005333	LSM10	100	90.244	ENSANAG00000018759	-	100	90.244	Aotus_nancymaae
ENSOCUG00000005333	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSOCUG00000005333	LSM10	96	64.407	ENSAMXG00000025301	oscp1a	98	64.407	Astyanax_mexicanus
ENSOCUG00000005333	LSM10	98	90.000	ENSBTAG00000024096	LSM10	98	90.000	Bos_taurus
ENSOCUG00000005333	LSM10	100	89.431	ENSCJAG00000044880	LSM10	100	89.431	Callithrix_jacchus
ENSOCUG00000005333	LSM10	100	91.057	ENSCAFG00000003382	LSM10	100	91.057	Canis_familiaris
ENSOCUG00000005333	LSM10	100	91.057	ENSCAFG00020008920	LSM10	100	91.057	Canis_lupus_dingo
ENSOCUG00000005333	LSM10	98	90.000	ENSCHIG00000009398	LSM10	98	90.000	Capra_hircus
ENSOCUG00000005333	LSM10	100	90.244	ENSCAPG00000012567	LSM10	100	90.244	Cavia_aperea
ENSOCUG00000005333	LSM10	100	90.244	ENSCPOG00000039302	LSM10	100	90.244	Cavia_porcellus
ENSOCUG00000005333	LSM10	98	88.333	ENSCCAG00000008378	-	98	88.333	Cebus_capucinus
ENSOCUG00000005333	LSM10	100	90.244	ENSCCAG00000018913	-	100	90.244	Cebus_capucinus
ENSOCUG00000005333	LSM10	100	90.244	ENSCATG00000006589	LSM10	100	90.244	Cercocebus_atys
ENSOCUG00000005333	LSM10	100	91.057	ENSCLAG00000008633	LSM10	100	91.057	Chinchilla_lanigera
ENSOCUG00000005333	LSM10	100	90.244	ENSCSAG00000000134	LSM10	100	90.244	Chlorocebus_sabaeus
ENSOCUG00000005333	LSM10	100	90.400	ENSCHOG00000008615	LSM10	100	90.400	Choloepus_hoffmanni
ENSOCUG00000005333	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSOCUG00000005333	LSM10	100	90.244	ENSCANG00000019928	LSM10	100	90.244	Colobus_angolensis_palliatus
ENSOCUG00000005333	LSM10	98	88.430	ENSCGRG00001004317	-	99	88.430	Cricetulus_griseus_chok1gshd
ENSOCUG00000005333	LSM10	93	78.632	ENSCGRG00001022673	-	94	78.632	Cricetulus_griseus_chok1gshd
ENSOCUG00000005333	LSM10	93	78.632	ENSCGRG00000015514	-	94	78.632	Cricetulus_griseus_crigri
ENSOCUG00000005333	LSM10	98	88.430	ENSCGRG00000014935	-	99	88.430	Cricetulus_griseus_crigri
ENSOCUG00000005333	LSM10	96	62.712	ENSCSEG00000010374	oscp1a	79	62.712	Cynoglossus_semilaevis
ENSOCUG00000005333	LSM10	97	63.866	ENSCVAG00000001536	oscp1a	90	63.866	Cyprinodon_variegatus
ENSOCUG00000005333	LSM10	69	68.235	ENSDARG00000109563	CABZ01074453.1	99	68.235	Danio_rerio
ENSOCUG00000005333	LSM10	98	68.595	ENSDARG00000101222	oscp1a	100	68.595	Danio_rerio
ENSOCUG00000005333	LSM10	99	90.984	ENSDNOG00000036662	LSM10	99	90.984	Dasypus_novemcinctus
ENSOCUG00000005333	LSM10	100	87.805	ENSDORG00000007579	Lsm10	100	87.805	Dipodomys_ordii
ENSOCUG00000005333	LSM10	94	30.172	FBgn0033554	Lsm10	82	30.172	Drosophila_melanogaster
ENSOCUG00000005333	LSM10	100	87.805	ENSETEG00000005703	LSM10	100	87.805	Echinops_telfairi
ENSOCUG00000005333	LSM10	98	51.240	ENSEBUG00000001312	oscp1a	99	51.240	Eptatretus_burgeri
ENSOCUG00000005333	LSM10	100	89.431	ENSEASG00005012194	LSM10	100	89.431	Equus_asinus_asinus
ENSOCUG00000005333	LSM10	100	90.244	ENSECAG00000005071	LSM10	100	90.244	Equus_caballus
ENSOCUG00000005333	LSM10	100	87.805	ENSEEUG00000012032	LSM10	100	87.805	Erinaceus_europaeus
ENSOCUG00000005333	LSM10	99	67.213	ENSELUG00000007452	oscp1a	100	67.213	Esox_lucius
ENSOCUG00000005333	LSM10	100	71.545	ENSFALG00000000851	LSM10	100	71.545	Ficedula_albicollis
ENSOCUG00000005333	LSM10	100	87.805	ENSFDAG00000021056	LSM10	100	87.805	Fukomys_damarensis
ENSOCUG00000005333	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSOCUG00000005333	LSM10	86	62.264	ENSGMOG00000019832	oscp1a	89	62.264	Gadus_morhua
ENSOCUG00000005333	LSM10	100	73.984	ENSGALG00000002127	LSM10	100	73.984	Gallus_gallus
ENSOCUG00000005333	LSM10	91	60.000	ENSGAFG00000016445	oscp1a	93	60.000	Gambusia_affinis
ENSOCUG00000005333	LSM10	96	62.712	ENSGACG00000002329	oscp1a	97	62.712	Gasterosteus_aculeatus
ENSOCUG00000005333	LSM10	100	74.797	ENSGAGG00000024848	LSM10	100	74.797	Gopherus_agassizii
ENSOCUG00000005333	LSM10	100	90.244	ENSGGOG00000003556	LSM10	100	90.244	Gorilla_gorilla
ENSOCUG00000005333	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSOCUG00000005333	LSM10	100	89.431	ENSHGLG00000011625	LSM10	100	89.431	Heterocephalus_glaber_female
ENSOCUG00000005333	LSM10	100	89.431	ENSHGLG00100001769	LSM10	100	89.431	Heterocephalus_glaber_male
ENSOCUG00000005333	LSM10	86	65.094	ENSIPUG00000005808	oscp1a	92	65.094	Ictalurus_punctatus
ENSOCUG00000005333	LSM10	100	88.618	ENSSTOG00000000606	LSM10	100	88.618	Ictidomys_tridecemlineatus
ENSOCUG00000005333	LSM10	96	64.407	ENSKMAG00000012143	oscp1a	98	64.407	Kryptolebias_marmoratus
ENSOCUG00000005333	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSOCUG00000005333	LSM10	100	74.797	ENSLACG00000015904	LSM10	95	74.797	Latimeria_chalumnae
ENSOCUG00000005333	LSM10	98	69.167	ENSLOCG00000018277	oscp1a	98	69.167	Lepisosteus_oculatus
ENSOCUG00000005333	LSM10	100	88.618	ENSLAFG00000009600	LSM10	100	88.618	Loxodonta_africana
ENSOCUG00000005333	LSM10	100	90.244	ENSMFAG00000009115	LSM10	100	90.244	Macaca_fascicularis
ENSOCUG00000005333	LSM10	100	90.244	ENSMMUG00000017338	LSM10	100	90.244	Macaca_mulatta
ENSOCUG00000005333	LSM10	100	90.244	ENSMNEG00000020023	LSM10	100	90.244	Macaca_nemestrina
ENSOCUG00000005333	LSM10	100	90.244	ENSMLEG00000025150	LSM10	100	90.244	Mandrillus_leucophaeus
ENSOCUG00000005333	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSOCUG00000005333	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSOCUG00000005333	LSM10	100	73.171	ENSMGAG00000015707	LSM10	100	73.171	Meleagris_gallopavo
ENSOCUG00000005333	LSM10	98	89.256	ENSMAUG00000016624	Lsm10	99	89.256	Mesocricetus_auratus
ENSOCUG00000005333	LSM10	98	89.256	ENSMOCG00000021943	Lsm10	99	89.256	Microtus_ochrogaster
ENSOCUG00000005333	LSM10	98	63.333	ENSMMOG00000013597	oscp1a	90	63.333	Mola_mola
ENSOCUG00000005333	LSM10	100	83.740	ENSMODG00000023328	LSM10	100	83.740	Monodelphis_domestica
ENSOCUG00000005333	LSM10	58	56.579	ENSMALG00000012661	oscp1a	60	56.579	Monopterus_albus
ENSOCUG00000005333	LSM10	98	88.430	MGP_CAROLIEiJ_G0026467	Lsm10	100	89.247	Mus_caroli
ENSOCUG00000005333	LSM10	98	89.256	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSOCUG00000005333	LSM10	98	89.256	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSOCUG00000005333	LSM10	98	89.256	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSOCUG00000005333	LSM10	100	91.057	ENSMPUG00000018593	LSM10	100	91.057	Mustela_putorius_furo
ENSOCUG00000005333	LSM10	100	87.805	ENSMLUG00000023895	LSM10	100	87.805	Myotis_lucifugus
ENSOCUG00000005333	LSM10	100	88.618	ENSNGAG00000015011	Lsm10	100	88.618	Nannospalax_galili
ENSOCUG00000005333	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSOCUG00000005333	LSM10	100	91.057	ENSNLEG00000033754	LSM10	100	91.057	Nomascus_leucogenys
ENSOCUG00000005333	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSOCUG00000005333	LSM10	100	96.748	ENSOPRG00000001699	LSM10	100	96.748	Ochotona_princeps
ENSOCUG00000005333	LSM10	100	91.057	ENSODEG00000019161	LSM10	100	91.057	Octodon_degus
ENSOCUG00000005333	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSOCUG00000005333	LSM10	100	77.236	ENSOANG00000002066	LSM10	100	77.236	Ornithorhynchus_anatinus
ENSOCUG00000005333	LSM10	97	63.866	ENSORLG00000009504	oscp1a	98	63.866	Oryzias_latipes
ENSOCUG00000005333	LSM10	97	63.866	ENSORLG00020016201	oscp1a	98	63.866	Oryzias_latipes_hni
ENSOCUG00000005333	LSM10	97	64.706	ENSORLG00015007794	oscp1a	98	64.706	Oryzias_latipes_hsok
ENSOCUG00000005333	LSM10	100	88.618	ENSOGAG00000002653	LSM10	100	88.618	Otolemur_garnettii
ENSOCUG00000005333	LSM10	98	90.000	ENSOARG00000009596	LSM10	98	90.000	Ovis_aries
ENSOCUG00000005333	LSM10	100	90.244	ENSPPAG00000023465	LSM10	100	90.244	Pan_paniscus
ENSOCUG00000005333	LSM10	100	90.244	ENSPPRG00000014619	LSM10	100	90.244	Panthera_pardus
ENSOCUG00000005333	LSM10	100	90.244	ENSPTIG00000004613	LSM10	100	90.244	Panthera_tigris_altaica
ENSOCUG00000005333	LSM10	100	90.244	ENSPTRG00000000539	LSM10	100	90.244	Pan_troglodytes
ENSOCUG00000005333	LSM10	100	90.244	ENSPANG00000023172	LSM10	100	90.244	Papio_anubis
ENSOCUG00000005333	LSM10	98	65.000	ENSPKIG00000003728	oscp1a	97	65.000	Paramormyrops_kingsleyae
ENSOCUG00000005333	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSOCUG00000005333	LSM10	62	61.842	ENSPMGG00000015718	oscp1a	99	61.842	Periophthalmus_magnuspinnatus
ENSOCUG00000005333	LSM10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSOCUG00000005333	LSM10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSOCUG00000005333	LSM10	91	66.964	ENSPLAG00000016537	oscp1a	85	66.964	Poecilia_latipinna
ENSOCUG00000005333	LSM10	88	67.593	ENSPMEG00000000174	oscp1a	94	67.593	Poecilia_mexicana
ENSOCUG00000005333	LSM10	93	64.348	ENSPREG00000009899	oscp1a	88	64.348	Poecilia_reticulata
ENSOCUG00000005333	LSM10	100	91.057	ENSPPYG00000001539	LSM10	100	91.057	Pongo_abelii
ENSOCUG00000005333	LSM10	96	88.983	ENSPCAG00000002520	LSM10	97	88.983	Procavia_capensis
ENSOCUG00000005333	LSM10	100	89.431	ENSPVAG00000008644	LSM10	100	89.431	Pteropus_vampyrus
ENSOCUG00000005333	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSOCUG00000005333	LSM10	95	63.248	ENSPNAG00000028829	oscp1a	97	63.248	Pygocentrus_nattereri
ENSOCUG00000005333	LSM10	98	90.083	ENSRNOG00000025716	Lsm10	99	90.083	Rattus_norvegicus
ENSOCUG00000005333	LSM10	100	90.244	ENSRBIG00000001561	LSM10	100	90.244	Rhinopithecus_bieti
ENSOCUG00000005333	LSM10	100	90.244	ENSRROG00000011414	LSM10	100	90.244	Rhinopithecus_roxellana
ENSOCUG00000005333	LSM10	100	90.244	ENSSBOG00000036413	-	100	90.244	Saimiri_boliviensis_boliviensis
ENSOCUG00000005333	LSM10	100	82.927	ENSSHAG00000018056	LSM10	100	82.927	Sarcophilus_harrisii
ENSOCUG00000005333	LSM10	98	64.463	ENSSFOG00015019954	lsm10	99	64.463	Scleropages_formosus
ENSOCUG00000005333	LSM10	93	64.348	ENSSMAG00000001297	oscp1a	98	64.348	Scophthalmus_maximus
ENSOCUG00000005333	LSM10	98	61.983	ENSSDUG00000007090	oscp1a	98	61.983	Seriola_dumerili
ENSOCUG00000005333	LSM10	94	62.931	ENSSLDG00000000800	oscp1a	96	62.931	Seriola_lalandi_dorsalis
ENSOCUG00000005333	LSM10	100	88.000	ENSSARG00000004211	LSM10	100	88.800	Sorex_araneus
ENSOCUG00000005333	LSM10	94	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSOCUG00000005333	LSM10	100	88.618	ENSSSCG00000038916	LSM10	100	88.618	Sus_scrofa
ENSOCUG00000005333	LSM10	99	72.131	ENSTGUG00000001602	-	100	72.131	Taeniopygia_guttata
ENSOCUG00000005333	LSM10	99	72.131	ENSTGUG00000001600	-	100	72.131	Taeniopygia_guttata
ENSOCUG00000005333	LSM10	98	64.167	ENSTRUG00000010531	oscp1a	97	64.167	Takifugu_rubripes
ENSOCUG00000005333	LSM10	100	88.618	ENSTBEG00000016674	LSM10	100	88.618	Tupaia_belangeri
ENSOCUG00000005333	LSM10	100	89.431	ENSUAMG00000020265	LSM10	100	89.431	Ursus_americanus
ENSOCUG00000005333	LSM10	100	89.431	ENSUMAG00000001438	LSM10	57	89.431	Ursus_maritimus
ENSOCUG00000005333	LSM10	100	91.057	ENSVVUG00000023209	LSM10	100	91.057	Vulpes_vulpes
ENSOCUG00000005333	LSM10	100	68.293	ENSXETG00000027631	lsm10	100	68.293	Xenopus_tropicalis
ENSOCUG00000005333	LSM10	96	62.712	ENSXCOG00000018776	oscp1a	74	62.712	Xiphophorus_couchianus
ENSOCUG00000005333	LSM10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus