EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000005354 (Gene tree)
Gene ID: 100339194
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 46263 bases
Position: chrGL018805:88738-135000
Accession: 100339194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004650	AARP2CN	PF08142.12	8.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005360	BMS1-201	4193	XM_008250049	ENSOCUP00000004650	1280 (aa)	XP_008248271	G1SNS1

Gene Model

Click here to download ENSOCUG00000005354's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005354	BMS1	99	87.812	ENSG00000165733	BMS1	99	87.812	Homo_sapiens
ENSOCUG00000005354	BMS1	71	72.664	ENSAPOG00000002296	bms1	95	68.562	Acanthochromis_polyacanthus
ENSOCUG00000005354	BMS1	99	86.724	ENSAMEG00000016834	BMS1	99	87.034	Ailuropoda_melanoleuca
ENSOCUG00000005354	BMS1	77	80.381	ENSACIG00000002588	bms1	94	68.810	Amphilophus_citrinellus
ENSOCUG00000005354	BMS1	86	69.206	ENSAOCG00000018088	bms1	99	62.077	Amphiprion_ocellaris
ENSOCUG00000005354	BMS1	84	68.936	ENSAPEG00000014673	bms1	99	62.000	Amphiprion_percula
ENSOCUG00000005354	BMS1	88	69.342	ENSATEG00000023465	bms1	51	69.342	Anabas_testudineus
ENSOCUG00000005354	BMS1	95	72.325	ENSAPLG00000003759	BMS1	100	72.272	Anas_platyrhynchos
ENSOCUG00000005354	BMS1	99	70.453	ENSACAG00000004537	-	99	70.336	Anolis_carolinensis
ENSOCUG00000005354	BMS1	99	87.422	ENSANAG00000023432	BMS1	99	87.656	Aotus_nancymaae
ENSOCUG00000005354	BMS1	86	68.910	ENSACLG00000001294	bms1	95	68.910	Astatotilapia_calliptera
ENSOCUG00000005354	BMS1	82	72.706	ENSAMXG00000011236	bms1	50	66.667	Astyanax_mexicanus
ENSOCUG00000005354	BMS1	99	87.588	ENSBTAG00000012878	BMS1	99	88.378	Bos_taurus
ENSOCUG00000005354	BMS1	80	51.923	WBGene00022021	Y61A9LA.10	99	50.110	Caenorhabditis_elegans
ENSOCUG00000005354	BMS1	99	87.969	ENSCJAG00000021705	BMS1	99	87.891	Callithrix_jacchus
ENSOCUG00000005354	BMS1	99	87.451	ENSCAFG00000007114	BMS1	99	87.207	Canis_familiaris
ENSOCUG00000005354	BMS1	99	87.451	ENSCAFG00020025282	BMS1	99	87.207	Canis_lupus_dingo
ENSOCUG00000005354	BMS1	99	87.510	ENSCHIG00000023251	BMS1	99	87.988	Capra_hircus
ENSOCUG00000005354	BMS1	99	80.748	ENSCAPG00000008652	BMS1	100	80.904	Cavia_aperea
ENSOCUG00000005354	BMS1	99	84.801	ENSCPOG00000000502	BMS1	100	84.957	Cavia_porcellus
ENSOCUG00000005354	BMS1	99	72.756	ENSCCAG00000024969	-	99	72.834	Cebus_capucinus
ENSOCUG00000005354	BMS1	99	87.891	ENSCATG00000030625	-	99	87.812	Cercocebus_atys
ENSOCUG00000005354	BMS1	90	64.354	ENSCATG00000008695	-	97	64.639	Cercocebus_atys
ENSOCUG00000005354	BMS1	99	85.404	ENSCLAG00000002446	BMS1	100	85.171	Chinchilla_lanigera
ENSOCUG00000005354	BMS1	99	88.047	ENSCSAG00000011118	BMS1	99	88.125	Chlorocebus_sabaeus
ENSOCUG00000005354	BMS1	99	85.090	ENSCHOG00000011055	BMS1	99	85.636	Choloepus_hoffmanni
ENSOCUG00000005354	BMS1	99	72.581	ENSCPBG00000025581	BMS1	99	73.648	Chrysemys_picta_bellii
ENSOCUG00000005354	BMS1	79	58.838	ENSCING00000003181	-	99	55.804	Ciona_intestinalis
ENSOCUG00000005354	BMS1	67	55.904	ENSCSAVG00000004113	-	92	55.607	Ciona_savignyi
ENSOCUG00000005354	BMS1	99	88.672	ENSCANG00000011609	BMS1	99	88.516	Colobus_angolensis_palliatus
ENSOCUG00000005354	BMS1	99	84.903	ENSCGRG00001019461	Bms1	99	84.981	Cricetulus_griseus_chok1gshd
ENSOCUG00000005354	BMS1	99	84.903	ENSCGRG00000009016	Bms1	99	84.981	Cricetulus_griseus_crigri
ENSOCUG00000005354	BMS1	81	72.664	ENSCSEG00000002469	bms1	50	68.558	Cynoglossus_semilaevis
ENSOCUG00000005354	BMS1	85	69.453	ENSCVAG00000008371	bms1	95	68.960	Cyprinodon_variegatus
ENSOCUG00000005354	BMS1	88	67.619	ENSDARG00000054154	bms1	94	68.562	Danio_rerio
ENSOCUG00000005354	BMS1	99	87.014	ENSDNOG00000015761	BMS1	99	87.160	Dasypus_novemcinctus
ENSOCUG00000005354	BMS1	99	86.739	ENSDORG00000002982	Bms1	99	86.973	Dipodomys_ordii
ENSOCUG00000005354	BMS1	88	50.094	FBgn0036686	CG7728	96	51.076	Drosophila_melanogaster
ENSOCUG00000005354	BMS1	85	84.821	ENSETEG00000009554	BMS1	91	84.821	Echinops_telfairi
ENSOCUG00000005354	BMS1	99	87.978	ENSEASG00005006894	BMS1	99	88.993	Equus_asinus_asinus
ENSOCUG00000005354	BMS1	99	88.993	ENSECAG00000001358	BMS1	99	89.149	Equus_caballus
ENSOCUG00000005354	BMS1	89	66.923	ENSELUG00000001756	bms1	92	69.784	Esox_lucius
ENSOCUG00000005354	BMS1	99	86.817	ENSFCAG00000011220	BMS1	99	87.051	Felis_catus
ENSOCUG00000005354	BMS1	99	70.301	ENSFALG00000006882	BMS1	99	70.593	Ficedula_albicollis
ENSOCUG00000005354	BMS1	99	84.567	ENSFDAG00000001422	BMS1	100	83.697	Fukomys_damarensis
ENSOCUG00000005354	BMS1	85	70.981	ENSFHEG00000003367	bms1	97	70.254	Fundulus_heteroclitus
ENSOCUG00000005354	BMS1	94	63.127	ENSGMOG00000000718	bms1	96	65.968	Gadus_morhua
ENSOCUG00000005354	BMS1	99	71.319	ENSGALG00000002624	BMS1	99	72.560	Gallus_gallus
ENSOCUG00000005354	BMS1	99	59.784	ENSGACG00000015334	bms1	89	65.446	Gasterosteus_aculeatus
ENSOCUG00000005354	BMS1	99	73.323	ENSGAGG00000003467	BMS1	99	72.996	Gopherus_agassizii
ENSOCUG00000005354	BMS1	86	68.910	ENSHBUG00000022628	bms1	95	68.910	Haplochromis_burtoni
ENSOCUG00000005354	BMS1	99	84.465	ENSHGLG00000000477	BMS1	100	84.231	Heterocephalus_glaber_female
ENSOCUG00000005354	BMS1	99	84.543	ENSHGLG00100002176	BMS1	100	84.153	Heterocephalus_glaber_male
ENSOCUG00000005354	BMS1	88	67.101	ENSHCOG00000017604	bms1	96	67.261	Hippocampus_comes
ENSOCUG00000005354	BMS1	99	87.373	ENSSTOG00000015063	BMS1	100	87.461	Ictidomys_tridecemlineatus
ENSOCUG00000005354	BMS1	99	85.101	ENSJJAG00000017328	Bms1	100	85.659	Jaculus_jaculus
ENSOCUG00000005354	BMS1	56	67.304	ENSKMAG00000021982	bms1	91	67.906	Kryptolebias_marmoratus
ENSOCUG00000005354	BMS1	81	71.560	ENSLBEG00000028208	bms1	95	67.886	Labrus_bergylta
ENSOCUG00000005354	BMS1	99	61.621	ENSLACG00000001600	BMS1	100	61.785	Latimeria_chalumnae
ENSOCUG00000005354	BMS1	83	74.208	ENSLOCG00000012914	bms1	99	63.097	Lepisosteus_oculatus
ENSOCUG00000005354	BMS1	99	85.326	ENSLAFG00000006250	BMS1	100	84.914	Loxodonta_africana
ENSOCUG00000005354	BMS1	83	87.912	ENSMFAG00000037771	BMS1	99	88.068	Macaca_fascicularis
ENSOCUG00000005354	BMS1	90	73.087	ENSMMUG00000007426	-	99	73.345	Macaca_mulatta
ENSOCUG00000005354	BMS1	84	68.566	ENSMLEG00000029084	-	97	68.934	Mandrillus_leucophaeus
ENSOCUG00000005354	BMS1	99	59.317	ENSMAMG00000020855	bms1	95	65.920	Mastacembelus_armatus
ENSOCUG00000005354	BMS1	88	67.525	ENSMZEG00005005663	bms1	95	68.910	Maylandia_zebra
ENSOCUG00000005354	BMS1	95	71.256	ENSMGAG00000001170	BMS1	99	72.119	Meleagris_gallopavo
ENSOCUG00000005354	BMS1	99	84.914	ENSMAUG00000002195	Bms1	99	84.370	Mesocricetus_auratus
ENSOCUG00000005354	BMS1	99	86.838	ENSMICG00000009977	BMS1	99	86.682	Microcebus_murinus
ENSOCUG00000005354	BMS1	99	82.984	ENSMOCG00000002038	Bms1	99	83.969	Microtus_ochrogaster
ENSOCUG00000005354	BMS1	85	68.123	ENSMMOG00000000977	bms1	95	68.123	Mola_mola
ENSOCUG00000005354	BMS1	99	77.531	ENSMODG00000001177	BMS1	99	77.871	Monodelphis_domestica
ENSOCUG00000005354	BMS1	97	62.241	ENSMALG00000009680	bms1	99	60.062	Monopterus_albus
ENSOCUG00000005354	BMS1	74	94.903	MGP_CAROLIEiJ_G0028785	-	86	94.903	Mus_caroli
ENSOCUG00000005354	BMS1	99	84.992	ENSMUSG00000030138	Bms1	99	85.070	Mus_musculus
ENSOCUG00000005354	BMS1	99	84.424	MGP_PahariEiJ_G0022539	Bms1	99	84.567	Mus_pahari
ENSOCUG00000005354	BMS1	99	84.603	MGP_SPRETEiJ_G0029816	Bms1	99	84.591	Mus_spretus
ENSOCUG00000005354	BMS1	99	87.598	ENSMPUG00000017276	BMS1	99	87.598	Mustela_putorius_furo
ENSOCUG00000005354	BMS1	99	85.703	ENSMLUG00000003260	BMS1	99	85.881	Myotis_lucifugus
ENSOCUG00000005354	BMS1	99	74.419	ENSNGAG00000015258	Bms1	99	75.528	Nannospalax_galili
ENSOCUG00000005354	BMS1	99	85.981	ENSNLEG00000015791	BMS1	99	86.474	Nomascus_leucogenys
ENSOCUG00000005354	BMS1	81	96.667	ENSOPRG00000005195	BMS1	81	96.667	Ochotona_princeps
ENSOCUG00000005354	BMS1	99	85.303	ENSODEG00000005554	BMS1	100	85.148	Octodon_degus
ENSOCUG00000005354	BMS1	89	68.971	ENSONIG00000007227	bms1	95	68.971	Oreochromis_niloticus
ENSOCUG00000005354	BMS1	99	77.103	ENSOANG00000000662	-	99	77.382	Ornithorhynchus_anatinus
ENSOCUG00000005354	BMS1	87	68.760	ENSORLG00000014655	bms1	95	68.798	Oryzias_latipes
ENSOCUG00000005354	BMS1	87	69.109	ENSORLG00020016246	bms1	92	69.494	Oryzias_latipes_hni
ENSOCUG00000005354	BMS1	87	69.544	ENSORLG00015014183	bms1	88	68.593	Oryzias_latipes_hsok
ENSOCUG00000005354	BMS1	87	69.368	ENSOMEG00000015042	bms1	94	69.194	Oryzias_melastigma
ENSOCUG00000005354	BMS1	99	87.742	ENSOGAG00000006511	BMS1	99	88.208	Otolemur_garnettii
ENSOCUG00000005354	BMS1	99	87.393	ENSOARG00000003900	BMS1	99	87.869	Ovis_aries
ENSOCUG00000005354	BMS1	99	84.231	ENSPPAG00000027837	BMS1	99	84.231	Pan_paniscus
ENSOCUG00000005354	BMS1	99	86.583	ENSPPRG00000001311	BMS1	99	86.817	Panthera_pardus
ENSOCUG00000005354	BMS1	99	84.856	ENSPTIG00000009652	BMS1	99	85.558	Panthera_tigris_altaica
ENSOCUG00000005354	BMS1	99	87.969	ENSPTRG00000002441	BMS1	99	87.969	Pan_troglodytes
ENSOCUG00000005354	BMS1	99	71.614	ENSPSIG00000006481	BMS1	99	73.103	Pelodiscus_sinensis
ENSOCUG00000005354	BMS1	99	78.387	ENSPEMG00000022467	Bms1	99	78.387	Peromyscus_maniculatus_bairdii
ENSOCUG00000005354	BMS1	95	93.289	ENSPCIG00000001339	BMS1	99	85.434	Phascolarctos_cinereus
ENSOCUG00000005354	BMS1	80	75.123	ENSPFOG00000015180	bms1	95	68.006	Poecilia_formosa
ENSOCUG00000005354	BMS1	80	75.369	ENSPMEG00000023176	bms1	90	67.258	Poecilia_mexicana
ENSOCUG00000005354	BMS1	80	74.328	ENSPREG00000002695	bms1	95	67.524	Poecilia_reticulata
ENSOCUG00000005354	BMS1	60	83.954	ENSPPYG00000002836	-	99	84.211	Pongo_abelii
ENSOCUG00000005354	BMS1	72	94.558	ENSPCAG00000014528	BMS1	73	94.558	Procavia_capensis
ENSOCUG00000005354	BMS1	95	83.604	ENSPCOG00000023834	-	99	84.497	Propithecus_coquereli
ENSOCUG00000005354	BMS1	99	84.363	ENSPVAG00000000725	BMS1	99	83.672	Pteropus_vampyrus
ENSOCUG00000005354	BMS1	97	62.290	ENSPNYG00000018866	bms1	86	68.340	Pundamilia_nyererei
ENSOCUG00000005354	BMS1	51	66.464	ENSPNAG00000000676	bms1	99	63.158	Pygocentrus_nattereri
ENSOCUG00000005354	BMS1	82	81.664	ENSRNOG00000006576	Bms1	100	82.510	Rattus_norvegicus
ENSOCUG00000005354	BMS1	99	86.630	ENSRROG00000040101	BMS1	99	86.875	Rhinopithecus_roxellana
ENSOCUG00000005354	BMS1	74	46.300	YPL217C	-	82	46.602	Saccharomyces_cerevisiae
ENSOCUG00000005354	BMS1	99	88.438	ENSSBOG00000035778	BMS1	99	88.438	Saimiri_boliviensis_boliviensis
ENSOCUG00000005354	BMS1	99	77.200	ENSSHAG00000005062	BMS1	99	76.970	Sarcophilus_harrisii
ENSOCUG00000005354	BMS1	82	74.365	ENSSMAG00000019966	bms1	99	61.035	Scophthalmus_maximus
ENSOCUG00000005354	BMS1	69	75.781	ENSSARG00000014407	BMS1	100	74.554	Sorex_araneus
ENSOCUG00000005354	BMS1	99	72.269	ENSSPUG00000014454	BMS1	99	71.407	Sphenodon_punctatus
ENSOCUG00000005354	BMS1	99	87.363	ENSSSCG00000010198	BMS1	99	88.456	Sus_scrofa
ENSOCUG00000005354	BMS1	99	70.706	ENSTGUG00000006302	-	99	70.404	Taeniopygia_guttata
ENSOCUG00000005354	BMS1	86	65.113	ENSTRUG00000008028	bms1	95	64.961	Takifugu_rubripes
ENSOCUG00000005354	BMS1	99	59.691	ENSTNIG00000006216	bms1	88	66.234	Tetraodon_nigroviridis
ENSOCUG00000005354	BMS1	60	92.203	ENSTBEG00000001673	-	64	91.200	Tupaia_belangeri
ENSOCUG00000005354	BMS1	99	85.703	ENSTTRG00000007983	BMS1	99	84.922	Tursiops_truncatus
ENSOCUG00000005354	BMS1	99	87.051	ENSUAMG00000023996	BMS1	99	87.656	Ursus_americanus
ENSOCUG00000005354	BMS1	99	86.973	ENSUMAG00000016523	BMS1	99	87.578	Ursus_maritimus
ENSOCUG00000005354	BMS1	88	81.730	ENSVPAG00000007477	BMS1	99	83.142	Vicugna_pacos
ENSOCUG00000005354	BMS1	99	87.451	ENSVVUG00000021305	BMS1	99	87.207	Vulpes_vulpes
ENSOCUG00000005354	BMS1	98	64.246	ENSXETG00000008158	bms1	99	65.576	Xenopus_tropicalis
ENSOCUG00000005354	BMS1	85	68.922	ENSXCOG00000000506	bms1	95	76.601	Xiphophorus_couchianus
ENSOCUG00000005354	BMS1	85	69.133	ENSXMAG00000014236	bms1	99	67.115	Xiphophorus_maculatus