EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000005511 (Gene tree)
Gene ID: 100348044
Gene Symbol: SYMPK
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 32716 bases
Position: chrGL019168:2057-34772
Accession: 22935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004785	Symplekin_C	PF12295.8	7.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005515	SYMPK-201	3809	-	ENSOCUP00000004785	1069 (aa)	-	G1SP33

Gene Model

Click here to download ENSOCUG00000005511's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG
ocu04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005511	SYMPK	92	95.980	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
ENSOCUG00000005511	SYMPK	88	73.656	ENSAPOG00000015934	sympk	87	70.943	Acanthochromis_polyacanthus
ENSOCUG00000005511	SYMPK	90	97.306	ENSAMEG00000000680	SYMPK	76	97.306	Ailuropoda_melanoleuca
ENSOCUG00000005511	SYMPK	88	73.941	ENSACIG00000006357	sympk	79	73.629	Amphilophus_citrinellus
ENSOCUG00000005511	SYMPK	88	73.214	ENSAOCG00000024124	sympk	79	73.633	Amphiprion_ocellaris
ENSOCUG00000005511	SYMPK	88	73.214	ENSAPEG00000003465	sympk	78	73.214	Amphiprion_percula
ENSOCUG00000005511	SYMPK	89	73.486	ENSATEG00000008472	sympk	78	73.486	Anabas_testudineus
ENSOCUG00000005511	SYMPK	80	84.977	ENSACAG00000004126	SYMPK	72	84.977	Anolis_carolinensis
ENSOCUG00000005511	SYMPK	92	96.945	ENSANAG00000021087	SYMPK	92	98.029	Aotus_nancymaae
ENSOCUG00000005511	SYMPK	89	73.486	ENSACLG00000001813	sympk	78	73.646	Astatotilapia_calliptera
ENSOCUG00000005511	SYMPK	90	72.103	ENSAMXG00000013677	sympk	79	72.456	Astyanax_mexicanus
ENSOCUG00000005511	SYMPK	90	96.995	ENSBTAG00000012101	SYMPK	76	96.995	Bos_taurus
ENSOCUG00000005511	SYMPK	83	30.965	WBGene00017797	symk-1	80	30.965	Caenorhabditis_elegans
ENSOCUG00000005511	SYMPK	90	97.824	ENSCJAG00000012172	SYMPK	95	96.757	Callithrix_jacchus
ENSOCUG00000005511	SYMPK	90	97.824	ENSCAFG00000004376	SYMPK	76	97.824	Canis_familiaris
ENSOCUG00000005511	SYMPK	90	97.824	ENSCAFG00020001815	SYMPK	76	97.824	Canis_lupus_dingo
ENSOCUG00000005511	SYMPK	90	97.202	ENSCHIG00000026784	SYMPK	76	97.202	Capra_hircus
ENSOCUG00000005511	SYMPK	91	97.016	ENSTSYG00000006268	SYMPK	95	97.376	Carlito_syrichta
ENSOCUG00000005511	SYMPK	88	95.987	ENSCAPG00000005112	SYMPK	86	95.987	Cavia_aperea
ENSOCUG00000005511	SYMPK	90	97.098	ENSCPOG00000010434	SYMPK	77	97.098	Cavia_porcellus
ENSOCUG00000005511	SYMPK	93	96.566	ENSCCAG00000036309	SYMPK	98	96.566	Cebus_capucinus
ENSOCUG00000005511	SYMPK	91	97.531	ENSCATG00000045107	SYMPK	94	97.531	Cercocebus_atys
ENSOCUG00000005511	SYMPK	97	95.164	ENSCLAG00000001206	SYMPK	76	97.409	Chinchilla_lanigera
ENSOCUG00000005511	SYMPK	90	97.824	ENSCSAG00000003115	SYMPK	76	97.824	Chlorocebus_sabaeus
ENSOCUG00000005511	SYMPK	71	100.000	ENSCHOG00000012456	SYMPK	70	100.000	Choloepus_hoffmanni
ENSOCUG00000005511	SYMPK	90	86.783	ENSCPBG00000007170	SYMPK	78	86.783	Chrysemys_picta_bellii
ENSOCUG00000005511	SYMPK	85	47.300	ENSCING00000021232	-	83	47.300	Ciona_intestinalis
ENSOCUG00000005511	SYMPK	86	45.445	ENSCSAVG00000005154	-	88	45.763	Ciona_savignyi
ENSOCUG00000005511	SYMPK	92	93.467	ENSCANG00000040907	SYMPK	96	93.186	Colobus_angolensis_palliatus
ENSOCUG00000005511	SYMPK	81	97.206	ENSCGRG00001010086	Sympk	73	97.206	Cricetulus_griseus_chok1gshd
ENSOCUG00000005511	SYMPK	88	73.817	ENSCSEG00000016802	sympk	77	73.817	Cynoglossus_semilaevis
ENSOCUG00000005511	SYMPK	89	72.414	ENSDARG00000059553	sympk	76	72.414	Danio_rerio
ENSOCUG00000005511	SYMPK	92	95.842	ENSDNOG00000016149	SYMPK	77	95.842	Dasypus_novemcinctus
ENSOCUG00000005511	SYMPK	90	34.483	FBgn0037371	Sym	83	34.483	Drosophila_melanogaster
ENSOCUG00000005511	SYMPK	65	59.527	ENSEBUG00000000387	sympk	74	59.527	Eptatretus_burgeri
ENSOCUG00000005511	SYMPK	90	97.927	ENSEASG00005014227	SYMPK	76	97.927	Equus_asinus_asinus
ENSOCUG00000005511	SYMPK	90	97.927	ENSECAG00000008163	SYMPK	76	97.927	Equus_caballus
ENSOCUG00000005511	SYMPK	67	90.667	ENSEEUG00000000270	-	66	90.667	Erinaceus_europaeus
ENSOCUG00000005511	SYMPK	90	73.792	ENSELUG00000000850	sympk	77	73.792	Esox_lucius
ENSOCUG00000005511	SYMPK	90	97.720	ENSFCAG00000007337	SYMPK	76	97.720	Felis_catus
ENSOCUG00000005511	SYMPK	90	97.202	ENSFDAG00000011272	SYMPK	76	97.202	Fukomys_damarensis
ENSOCUG00000005511	SYMPK	88	74.101	ENSFHEG00000010274	sympk	78	74.101	Fundulus_heteroclitus
ENSOCUG00000005511	SYMPK	87	72.270	ENSGMOG00000002357	sympk	86	72.270	Gadus_morhua
ENSOCUG00000005511	SYMPK	88	74.578	ENSGAFG00000010976	sympk	78	74.578	Gambusia_affinis
ENSOCUG00000005511	SYMPK	89	72.453	ENSGACG00000002735	sympk	85	73.305	Gasterosteus_aculeatus
ENSOCUG00000005511	SYMPK	52	83.063	ENSGAGG00000012538	-	74	83.063	Gopherus_agassizii
ENSOCUG00000005511	SYMPK	92	96.653	ENSGGOG00000003410	SYMPK	97	96.080	Gorilla_gorilla
ENSOCUG00000005511	SYMPK	89	73.881	ENSHBUG00000023564	sympk	78	73.881	Haplochromis_burtoni
ENSOCUG00000005511	SYMPK	90	91.192	ENSHGLG00000005228	SYMPK	75	91.192	Heterocephalus_glaber_female
ENSOCUG00000005511	SYMPK	90	97.098	ENSHGLG00100018571	SYMPK	78	97.098	Heterocephalus_glaber_male
ENSOCUG00000005511	SYMPK	87	68.837	ENSHCOG00000017400	sympk	78	68.837	Hippocampus_comes
ENSOCUG00000005511	SYMPK	90	72.045	ENSIPUG00000024020	SYMPK	78	72.045	Ictalurus_punctatus
ENSOCUG00000005511	SYMPK	90	97.720	ENSSTOG00000001534	SYMPK	76	97.720	Ictidomys_tridecemlineatus
ENSOCUG00000005511	SYMPK	90	96.995	ENSJJAG00000006633	Sympk	76	96.995	Jaculus_jaculus
ENSOCUG00000005511	SYMPK	88	73.739	ENSKMAG00000016292	sympk	78	73.739	Kryptolebias_marmoratus
ENSOCUG00000005511	SYMPK	88	73.013	ENSLBEG00000027913	sympk	96	70.890	Labrus_bergylta
ENSOCUG00000005511	SYMPK	89	71.950	ENSLACG00000016497	SYMPK	79	72.188	Latimeria_chalumnae
ENSOCUG00000005511	SYMPK	90	97.306	ENSLAFG00000008726	SYMPK	76	97.306	Loxodonta_africana
ENSOCUG00000005511	SYMPK	91	97.531	ENSMMUG00000015428	SYMPK	94	97.260	Macaca_mulatta
ENSOCUG00000005511	SYMPK	92	96.454	ENSMNEG00000019439	SYMPK	96	97.119	Macaca_nemestrina
ENSOCUG00000005511	SYMPK	91	97.531	ENSMLEG00000040508	SYMPK	93	97.531	Mandrillus_leucophaeus
ENSOCUG00000005511	SYMPK	88	73.734	ENSMAMG00000010486	sympk	78	73.734	Mastacembelus_armatus
ENSOCUG00000005511	SYMPK	89	73.486	ENSMZEG00005014146	sympk	78	73.646	Maylandia_zebra
ENSOCUG00000005511	SYMPK	90	96.788	ENSMAUG00000015657	Sympk	76	96.788	Mesocricetus_auratus
ENSOCUG00000005511	SYMPK	93	95.892	ENSMICG00000001871	SYMPK	92	97.925	Microcebus_murinus
ENSOCUG00000005511	SYMPK	90	96.580	ENSMOCG00000008388	Sympk	75	96.580	Microtus_ochrogaster
ENSOCUG00000005511	SYMPK	87	72.979	ENSMMOG00000019227	sympk	82	72.727	Mola_mola
ENSOCUG00000005511	SYMPK	91	91.487	ENSMODG00000021534	SYMPK	76	91.667	Monodelphis_domestica
ENSOCUG00000005511	SYMPK	87	69.501	ENSMALG00000008347	sympk	96	69.819	Monopterus_albus
ENSOCUG00000005511	SYMPK	90	96.788	MGP_CAROLIEiJ_G0029267	Sympk	75	96.788	Mus_caroli
ENSOCUG00000005511	SYMPK	90	96.580	ENSMUSG00000023118	Sympk	75	96.580	Mus_musculus
ENSOCUG00000005511	SYMPK	90	96.684	MGP_PahariEiJ_G0021127	Sympk	76	96.684	Mus_pahari
ENSOCUG00000005511	SYMPK	90	96.684	MGP_SPRETEiJ_G0030351	-	76	96.684	Mus_spretus
ENSOCUG00000005511	SYMPK	90	95.130	ENSMPUG00000005505	SYMPK	75	95.130	Mustela_putorius_furo
ENSOCUG00000005511	SYMPK	69	92.963	ENSMLUG00000001359	SYMPK	74	92.963	Myotis_lucifugus
ENSOCUG00000005511	SYMPK	90	97.202	ENSNGAG00000000820	Sympk	76	97.202	Nannospalax_galili
ENSOCUG00000005511	SYMPK	85	74.755	ENSNBRG00000018101	sympk	79	74.755	Neolamprologus_brichardi
ENSOCUG00000005511	SYMPK	90	82.816	ENSNLEG00000002369	SYMPK	74	82.816	Nomascus_leucogenys
ENSOCUG00000005511	SYMPK	68	92.857	ENSMEUG00000003866	SYMPK	58	92.857	Notamacropus_eugenii
ENSOCUG00000005511	SYMPK	90	97.513	ENSOPRG00000009967	SYMPK	76	97.513	Ochotona_princeps
ENSOCUG00000005511	SYMPK	90	97.098	ENSODEG00000007519	SYMPK	77	96.995	Octodon_degus
ENSOCUG00000005511	SYMPK	88	73.270	ENSONIG00000016802	sympk	83	73.270	Oreochromis_niloticus
ENSOCUG00000005511	SYMPK	90	72.671	ENSORLG00000015338	sympk	96	74.156	Oryzias_latipes
ENSOCUG00000005511	SYMPK	88	74.082	ENSORLG00020004402	sympk	78	74.082	Oryzias_latipes_hni
ENSOCUG00000005511	SYMPK	88	74.187	ENSORLG00015005712	sympk	78	74.187	Oryzias_latipes_hsok
ENSOCUG00000005511	SYMPK	88	73.913	ENSOMEG00000022561	sympk	78	73.913	Oryzias_melastigma
ENSOCUG00000005511	SYMPK	90	98.135	ENSOGAG00000013483	SYMPK	76	98.135	Otolemur_garnettii
ENSOCUG00000005511	SYMPK	90	93.924	ENSOARG00000010349	SYMPK	77	93.924	Ovis_aries
ENSOCUG00000005511	SYMPK	93	97.273	ENSPPAG00000043204	SYMPK	94	97.790	Pan_paniscus
ENSOCUG00000005511	SYMPK	90	97.720	ENSPPRG00000004282	SYMPK	76	97.720	Panthera_pardus
ENSOCUG00000005511	SYMPK	92	96.158	ENSPTIG00000015420	SYMPK	95	96.158	Panthera_tigris_altaica
ENSOCUG00000005511	SYMPK	93	97.273	ENSPTRG00000011169	SYMPK	94	97.790	Pan_troglodytes
ENSOCUG00000005511	SYMPK	91	97.531	ENSPANG00000019930	SYMPK	93	97.531	Papio_anubis
ENSOCUG00000005511	SYMPK	90	74.566	ENSPKIG00000017132	sympk	96	72.775	Paramormyrops_kingsleyae
ENSOCUG00000005511	SYMPK	90	96.995	ENSPEMG00000007564	Sympk	75	96.995	Peromyscus_maniculatus_bairdii
ENSOCUG00000005511	SYMPK	83	62.910	ENSPMAG00000004936	sympk	87	63.377	Petromyzon_marinus
ENSOCUG00000005511	SYMPK	90	91.942	ENSPCIG00000024476	SYMPK	80	88.911	Phascolarctos_cinereus
ENSOCUG00000005511	SYMPK	88	74.473	ENSPFOG00000001194	sympk	78	74.473	Poecilia_formosa
ENSOCUG00000005511	SYMPK	88	74.367	ENSPLAG00000012995	sympk	78	74.367	Poecilia_latipinna
ENSOCUG00000005511	SYMPK	88	74.367	ENSPMEG00000008099	sympk	78	74.367	Poecilia_mexicana
ENSOCUG00000005511	SYMPK	88	74.367	ENSPREG00000006176	sympk	78	74.367	Poecilia_reticulata
ENSOCUG00000005511	SYMPK	90	97.824	ENSPPYG00000010135	SYMPK	87	97.824	Pongo_abelii
ENSOCUG00000005511	SYMPK	83	89.708	ENSPCAG00000005182	SYMPK	69	89.708	Procavia_capensis
ENSOCUG00000005511	SYMPK	93	96.997	ENSPCOG00000023740	SYMPK	97	97.790	Propithecus_coquereli
ENSOCUG00000005511	SYMPK	90	95.233	ENSPVAG00000001355	SYMPK	78	95.233	Pteropus_vampyrus
ENSOCUG00000005511	SYMPK	89	73.881	ENSPNYG00000011455	sympk	78	73.881	Pundamilia_nyererei
ENSOCUG00000005511	SYMPK	90	74.333	ENSPNAG00000016505	sympk	77	74.333	Pygocentrus_nattereri
ENSOCUG00000005511	SYMPK	90	96.580	ENSRNOG00000014353	Sympk	75	96.580	Rattus_norvegicus
ENSOCUG00000005511	SYMPK	92	96.454	ENSRBIG00000040963	SYMPK	95	96.360	Rhinopithecus_bieti
ENSOCUG00000005511	SYMPK	92	96.454	ENSRROG00000024834	SYMPK	95	96.263	Rhinopithecus_roxellana
ENSOCUG00000005511	SYMPK	92	96.748	ENSSBOG00000034497	SYMPK	96	97.397	Saimiri_boliviensis_boliviensis
ENSOCUG00000005511	SYMPK	90	91.012	ENSSHAG00000003139	SYMPK	84	91.012	Sarcophilus_harrisii
ENSOCUG00000005511	SYMPK	90	74.872	ENSSFOG00015006974	sympk	79	74.872	Scleropages_formosus
ENSOCUG00000005511	SYMPK	88	73.807	ENSSMAG00000018130	sympk	62	73.807	Scophthalmus_maximus
ENSOCUG00000005511	SYMPK	89	73.613	ENSSDUG00000007092	sympk	78	73.613	Seriola_dumerili
ENSOCUG00000005511	SYMPK	89	73.613	ENSSLDG00000014774	sympk	96	72.269	Seriola_lalandi_dorsalis
ENSOCUG00000005511	SYMPK	90	85.788	ENSSPUG00000002789	SYMPK	75	85.685	Sphenodon_punctatus
ENSOCUG00000005511	SYMPK	88	73.712	ENSSPAG00000000854	sympk	78	73.712	Stegastes_partitus
ENSOCUG00000005511	SYMPK	90	97.513	ENSSSCG00000003093	SYMPK	76	97.513	Sus_scrofa
ENSOCUG00000005511	SYMPK	88	74.004	ENSTRUG00000010202	sympk	78	74.004	Takifugu_rubripes
ENSOCUG00000005511	SYMPK	88	73.166	ENSTNIG00000017855	sympk	84	73.166	Tetraodon_nigroviridis
ENSOCUG00000005511	SYMPK	84	89.231	ENSTBEG00000000454	SYMPK	70	89.231	Tupaia_belangeri
ENSOCUG00000005511	SYMPK	90	86.425	ENSTTRG00000014311	SYMPK	76	86.425	Tursiops_truncatus
ENSOCUG00000005511	SYMPK	90	95.625	ENSUAMG00000022272	SYMPK	95	96.912	Ursus_americanus
ENSOCUG00000005511	SYMPK	90	97.409	ENSUMAG00000023698	SYMPK	76	97.409	Ursus_maritimus
ENSOCUG00000005511	SYMPK	90	97.824	ENSVVUG00000003024	SYMPK	84	97.824	Vulpes_vulpes
ENSOCUG00000005511	SYMPK	89	73.229	ENSXETG00000024453	sympk	79	73.333	Xenopus_tropicalis
ENSOCUG00000005511	SYMPK	87	73.212	ENSXCOG00000015368	sympk	87	73.212	Xiphophorus_couchianus
ENSOCUG00000005511	SYMPK	88	74.473	ENSXMAG00000005737	sympk	78	74.473	Xiphophorus_maculatus