EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000005616 (Gene tree)
Gene ID: 100358562
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 58835 bases
Position: chrGL018764:949153-1007987
Accession: 445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004880	SEN1_N	PF12726.7	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005624	SETX-201	8010	-	ENSOCUP00000004880	2670 (aa)	-	G1SPB9

Gene Model

Click here to download ENSOCUG00000005616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005616	SETX	96	71.528	ENSG00000107290	SETX	96	79.235	Homo_sapiens
ENSOCUG00000005616	SETX	66	42.669	ENSAMXG00000014406	-	73	42.669	Astyanax_mexicanus
ENSOCUG00000005616	SETX	95	71.909	ENSCJAG00000018245	SETX	95	71.845	Callithrix_jacchus
ENSOCUG00000005616	SETX	96	67.091	ENSCPOG00000001492	SETX	95	67.113	Cavia_porcellus
ENSOCUG00000005616	SETX	95	69.208	ENSCLAG00000012582	SETX	97	69.305	Chinchilla_lanigera
ENSOCUG00000005616	SETX	69	93.177	ENSETEG00000008111	-	68	93.177	Echinops_telfairi
ENSOCUG00000005616	SETX	88	74.703	ENSECAG00000012019	SETX	97	74.703	Equus_caballus
ENSOCUG00000005616	SETX	69	44.681	ENSELUG00000022536	-	75	44.681	Esox_lucius
ENSOCUG00000005616	SETX	96	71.911	ENSFCAG00000007102	SETX	95	72.325	Felis_catus
ENSOCUG00000005616	SETX	69	74.761	ENSFALG00000001464	SETX	76	74.761	Ficedula_albicollis
ENSOCUG00000005616	SETX	96	70.958	ENSGGOG00000027664	SETX	99	78.040	Gorilla_gorilla
ENSOCUG00000005616	SETX	50	45.438	ENSIPUG00000006685	setx	74	45.438	Ictalurus_punctatus
ENSOCUG00000005616	SETX	70	54.044	ENSLOCG00000004264	SETX	80	54.044	Lepisosteus_oculatus
ENSOCUG00000005616	SETX	96	64.403	ENSMOCG00000000848	Setx	97	64.791	Microtus_ochrogaster
ENSOCUG00000005616	SETX	95	67.934	MGP_PahariEiJ_G0024821	Setx	93	68.750	Mus_pahari
ENSOCUG00000005616	SETX	93	73.252	ENSNLEG00000012839	SETX	91	73.252	Nomascus_leucogenys
ENSOCUG00000005616	SETX	96	71.447	ENSOGAG00000013387	SETX	95	71.365	Otolemur_garnettii
ENSOCUG00000005616	SETX	96	70.767	ENSPPAG00000004108	SETX	99	77.332	Pan_paniscus
ENSOCUG00000005616	SETX	97	71.857	ENSPPRG00000012867	SETX	95	72.050	Panthera_pardus
ENSOCUG00000005616	SETX	97	71.691	ENSPTIG00000021101	SETX	95	71.884	Panthera_tigris_altaica
ENSOCUG00000005616	SETX	96	70.704	ENSPTRG00000021495	SETX	99	77.176	Pan_troglodytes
ENSOCUG00000005616	SETX	67	49.905	ENSPKIG00000025162	SETX	73	50.095	Paramormyrops_kingsleyae
ENSOCUG00000005616	SETX	56	89.655	ENSSARG00000002336	-	60	89.655	Sorex_araneus
ENSOCUG00000005616	SETX	85	70.070	ENSSPUG00000016332	SETX	83	71.558	Sphenodon_punctatus
ENSOCUG00000005616	SETX	96	69.720	ENSSSCG00000005724	SETX	98	70.010	Sus_scrofa
ENSOCUG00000005616	SETX	73	74.618	ENSTGUG00000005117	SETX	83	74.618	Taeniopygia_guttata
ENSOCUG00000005616	SETX	71	65.291	ENSXETG00000006254	setx	83	58.871	Xenopus_tropicalis