EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000005713 (Gene tree)
Gene ID: 100346821
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 30339 bases
Position: chr20:13761417-13791755
Accession: 100346821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000004950	Beta-Casp	PF10996.8	6.5e-21	1	1
ENSOCUP00000004950	Lactamase_B	PF00753.27	1.1e-06	1	1
ENSOCUP00000004950	RMMBL	PF07521.12	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005715	CPSF2-201	5942	XM_002719594	ENSOCUP00000004950	782 (aa)	XP_002719640	G1SPH7

Gene Model

Click here to download ENSOCUG00000005713's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005713	CPSF2	100	99.233	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSOCUG00000005713	CPSF2	100	85.805	ENSAPOG00000001242	cpsf2	100	85.805	Acanthochromis_polyacanthus
ENSOCUG00000005713	CPSF2	100	86.076	ENSACIG00000009331	cpsf2	100	86.076	Amphilophus_citrinellus
ENSOCUG00000005713	CPSF2	100	85.805	ENSAOCG00000014095	cpsf2	100	85.805	Amphiprion_ocellaris
ENSOCUG00000005713	CPSF2	100	85.805	ENSAPEG00000009158	cpsf2	100	85.805	Amphiprion_percula
ENSOCUG00000005713	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSOCUG00000005713	CPSF2	100	96.178	ENSAPLG00000006330	CPSF2	100	96.178	Anas_platyrhynchos
ENSOCUG00000005713	CPSF2	100	95.147	ENSACAG00000009245	CPSF2	100	95.147	Anolis_carolinensis
ENSOCUG00000005713	CPSF2	100	99.233	ENSANAG00000022915	CPSF2	100	99.233	Aotus_nancymaae
ENSOCUG00000005713	CPSF2	100	85.642	ENSAMXG00000018696	cpsf2	100	85.642	Astyanax_mexicanus
ENSOCUG00000005713	CPSF2	100	99.488	ENSBTAG00000010227	CPSF2	100	99.488	Bos_taurus
ENSOCUG00000005713	CPSF2	100	41.452	WBGene00017313	cpsf-2	100	40.936	Caenorhabditis_elegans
ENSOCUG00000005713	CPSF2	100	99.233	ENSCJAG00000018069	CPSF2	100	99.233	Callithrix_jacchus
ENSOCUG00000005713	CPSF2	100	99.616	ENSCAFG00000010909	CPSF2	100	99.616	Canis_familiaris
ENSOCUG00000005713	CPSF2	100	99.616	ENSCAFG00020020670	CPSF2	100	99.616	Canis_lupus_dingo
ENSOCUG00000005713	CPSF2	100	99.488	ENSCHIG00000023848	CPSF2	100	99.488	Capra_hircus
ENSOCUG00000005713	CPSF2	100	98.338	ENSTSYG00000009036	CPSF2	100	98.338	Carlito_syrichta
ENSOCUG00000005713	CPSF2	100	99.488	ENSCPOG00000010899	CPSF2	100	99.488	Cavia_porcellus
ENSOCUG00000005713	CPSF2	100	99.233	ENSCCAG00000028088	CPSF2	100	99.233	Cebus_capucinus
ENSOCUG00000005713	CPSF2	100	99.361	ENSCATG00000030132	CPSF2	100	99.361	Cercocebus_atys
ENSOCUG00000005713	CPSF2	100	99.361	ENSCLAG00000012404	CPSF2	100	99.361	Chinchilla_lanigera
ENSOCUG00000005713	CPSF2	100	99.361	ENSCSAG00000011300	CPSF2	100	99.361	Chlorocebus_sabaeus
ENSOCUG00000005713	CPSF2	100	92.455	ENSCHOG00000012904	CPSF2	100	92.455	Choloepus_hoffmanni
ENSOCUG00000005713	CPSF2	100	96.552	ENSCPBG00000008766	CPSF2	97	96.552	Chrysemys_picta_bellii
ENSOCUG00000005713	CPSF2	100	54.931	ENSCING00000007881	-	100	54.557	Ciona_intestinalis
ENSOCUG00000005713	CPSF2	94	99.317	ENSCANG00000041651	CPSF2	100	99.317	Colobus_angolensis_palliatus
ENSOCUG00000005713	CPSF2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSOCUG00000005713	CPSF2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSOCUG00000005713	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSOCUG00000005713	CPSF2	100	85.044	ENSCVAG00000000095	cpsf2	100	85.171	Cyprinodon_variegatus
ENSOCUG00000005713	CPSF2	100	85.570	ENSDARG00000028971	cpsf2	100	85.570	Danio_rerio
ENSOCUG00000005713	CPSF2	100	99.233	ENSDNOG00000042757	CPSF2	100	99.233	Dasypus_novemcinctus
ENSOCUG00000005713	CPSF2	100	99.105	ENSDORG00000013709	Cpsf2	100	99.105	Dipodomys_ordii
ENSOCUG00000005713	CPSF2	100	53.798	FBgn0027873	Cpsf100	100	53.558	Drosophila_melanogaster
ENSOCUG00000005713	CPSF2	100	90.038	ENSETEG00000012123	CPSF2	100	90.038	Echinops_telfairi
ENSOCUG00000005713	CPSF2	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSOCUG00000005713	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSOCUG00000005713	CPSF2	100	99.233	ENSECAG00000023935	CPSF2	100	99.233	Equus_caballus
ENSOCUG00000005713	CPSF2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSOCUG00000005713	CPSF2	100	99.233	ENSFCAG00000007886	CPSF2	100	99.233	Felis_catus
ENSOCUG00000005713	CPSF2	100	96.424	ENSFALG00000002412	CPSF2	100	96.424	Ficedula_albicollis
ENSOCUG00000005713	CPSF2	100	99.361	ENSFDAG00000006327	CPSF2	100	99.361	Fukomys_damarensis
ENSOCUG00000005713	CPSF2	96	84.444	ENSFHEG00000015465	cpsf2	98	84.837	Fundulus_heteroclitus
ENSOCUG00000005713	CPSF2	100	83.460	ENSGMOG00000008761	cpsf2	100	83.460	Gadus_morhua
ENSOCUG00000005713	CPSF2	100	95.658	ENSGALG00000010783	CPSF2	100	96.169	Gallus_gallus
ENSOCUG00000005713	CPSF2	100	85.298	ENSGAFG00000001407	cpsf2	100	85.298	Gambusia_affinis
ENSOCUG00000005713	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSOCUG00000005713	CPSF2	100	96.679	ENSGAGG00000008287	CPSF2	100	96.679	Gopherus_agassizii
ENSOCUG00000005713	CPSF2	100	99.233	ENSGGOG00000011799	CPSF2	100	99.233	Gorilla_gorilla
ENSOCUG00000005713	CPSF2	100	85.044	ENSHBUG00000023466	cpsf2	100	85.044	Haplochromis_burtoni
ENSOCUG00000005713	CPSF2	100	99.233	ENSHGLG00000018311	CPSF2	100	99.233	Heterocephalus_glaber_female
ENSOCUG00000005713	CPSF2	100	99.233	ENSHGLG00100016460	CPSF2	100	99.233	Heterocephalus_glaber_male
ENSOCUG00000005713	CPSF2	100	84.411	ENSHCOG00000019527	cpsf2	98	84.411	Hippocampus_comes
ENSOCUG00000005713	CPSF2	100	85.642	ENSIPUG00000020857	cpsf2	100	85.642	Ictalurus_punctatus
ENSOCUG00000005713	CPSF2	100	99.361	ENSSTOG00000009528	CPSF2	100	99.361	Ictidomys_tridecemlineatus
ENSOCUG00000005713	CPSF2	100	99.616	ENSJJAG00000017925	Cpsf2	100	99.616	Jaculus_jaculus
ENSOCUG00000005713	CPSF2	100	84.537	ENSKMAG00000019429	cpsf2	100	84.537	Kryptolebias_marmoratus
ENSOCUG00000005713	CPSF2	95	84.070	ENSLBEG00000011585	cpsf2	100	84.225	Labrus_bergylta
ENSOCUG00000005713	CPSF2	100	89.911	ENSLACG00000019024	CPSF2	100	90.166	Latimeria_chalumnae
ENSOCUG00000005713	CPSF2	100	87.579	ENSLOCG00000014102	cpsf2	100	87.579	Lepisosteus_oculatus
ENSOCUG00000005713	CPSF2	100	98.980	ENSLAFG00000004891	CPSF2	100	98.980	Loxodonta_africana
ENSOCUG00000005713	CPSF2	100	99.361	ENSMFAG00000041212	CPSF2	100	99.361	Macaca_fascicularis
ENSOCUG00000005713	CPSF2	100	99.361	ENSMMUG00000000699	CPSF2	100	99.361	Macaca_mulatta
ENSOCUG00000005713	CPSF2	100	99.361	ENSMNEG00000031584	CPSF2	100	99.361	Macaca_nemestrina
ENSOCUG00000005713	CPSF2	100	99.361	ENSMLEG00000029394	CPSF2	100	99.361	Mandrillus_leucophaeus
ENSOCUG00000005713	CPSF2	100	85.805	ENSMAMG00000004235	cpsf2	100	85.805	Mastacembelus_armatus
ENSOCUG00000005713	CPSF2	100	85.171	ENSMZEG00005001769	cpsf2	100	85.171	Maylandia_zebra
ENSOCUG00000005713	CPSF2	100	95.663	ENSMGAG00000013122	CPSF2	100	96.173	Meleagris_gallopavo
ENSOCUG00000005713	CPSF2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSOCUG00000005713	CPSF2	100	99.233	ENSMICG00000016441	CPSF2	100	99.233	Microcebus_murinus
ENSOCUG00000005713	CPSF2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSOCUG00000005713	CPSF2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSOCUG00000005713	CPSF2	100	98.593	ENSMODG00000002042	CPSF2	100	98.593	Monodelphis_domestica
ENSOCUG00000005713	CPSF2	100	82.636	ENSMALG00000022275	cpsf2	100	82.636	Monopterus_albus
ENSOCUG00000005713	CPSF2	100	98.082	ENSMUSG00000041781	Cpsf2	100	98.082	Mus_musculus
ENSOCUG00000005713	CPSF2	100	98.338	MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	Mus_pahari
ENSOCUG00000005713	CPSF2	100	98.082	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	Mus_spretus
ENSOCUG00000005713	CPSF2	100	99.361	ENSMPUG00000007617	CPSF2	98	99.361	Mustela_putorius_furo
ENSOCUG00000005713	CPSF2	100	98.849	ENSMLUG00000005570	CPSF2	100	98.849	Myotis_lucifugus
ENSOCUG00000005713	CPSF2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSOCUG00000005713	CPSF2	100	85.551	ENSNBRG00000022402	cpsf2	100	85.551	Neolamprologus_brichardi
ENSOCUG00000005713	CPSF2	100	98.338	ENSNLEG00000017132	CPSF2	100	98.338	Nomascus_leucogenys
ENSOCUG00000005713	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSOCUG00000005713	CPSF2	94	91.803	ENSOPRG00000008484	-	100	91.803	Ochotona_princeps
ENSOCUG00000005713	CPSF2	100	99.105	ENSODEG00000008682	CPSF2	100	99.105	Octodon_degus
ENSOCUG00000005713	CPSF2	100	85.932	ENSONIG00000005901	cpsf2	100	85.932	Oreochromis_niloticus
ENSOCUG00000005713	CPSF2	100	98.210	ENSOANG00000003822	CPSF2	100	98.210	Ornithorhynchus_anatinus
ENSOCUG00000005713	CPSF2	100	79.975	ENSORLG00000011628	cpsf2	100	79.975	Oryzias_latipes
ENSOCUG00000005713	CPSF2	100	84.791	ENSORLG00020016980	cpsf2	100	84.791	Oryzias_latipes_hni
ENSOCUG00000005713	CPSF2	100	84.791	ENSORLG00015011910	cpsf2	100	84.791	Oryzias_latipes_hsok
ENSOCUG00000005713	CPSF2	100	84.030	ENSOMEG00000022876	cpsf2	100	84.030	Oryzias_melastigma
ENSOCUG00000005713	CPSF2	100	96.429	ENSOARG00000012889	CPSF2	100	96.429	Ovis_aries
ENSOCUG00000005713	CPSF2	100	99.233	ENSPPAG00000039666	CPSF2	100	99.233	Pan_paniscus
ENSOCUG00000005713	CPSF2	99	99.232	ENSPPRG00000010869	CPSF2	100	99.232	Panthera_pardus
ENSOCUG00000005713	CPSF2	100	99.233	ENSPTIG00000021202	CPSF2	100	99.233	Panthera_tigris_altaica
ENSOCUG00000005713	CPSF2	100	99.233	ENSPTRG00000006651	CPSF2	100	99.233	Pan_troglodytes
ENSOCUG00000005713	CPSF2	100	99.361	ENSPANG00000017417	CPSF2	100	99.361	Papio_anubis
ENSOCUG00000005713	CPSF2	100	82.084	ENSPKIG00000021453	cpsf2	100	82.084	Paramormyrops_kingsleyae
ENSOCUG00000005713	CPSF2	100	96.041	ENSPSIG00000006289	CPSF2	100	96.041	Pelodiscus_sinensis
ENSOCUG00000005713	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSOCUG00000005713	CPSF2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSOCUG00000005713	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSOCUG00000005713	CPSF2	100	98.593	ENSPCIG00000011393	CPSF2	100	98.593	Phascolarctos_cinereus
ENSOCUG00000005713	CPSF2	100	85.298	ENSPFOG00000018648	cpsf2	100	85.298	Poecilia_formosa
ENSOCUG00000005713	CPSF2	100	85.298	ENSPLAG00000019199	cpsf2	99	85.298	Poecilia_latipinna
ENSOCUG00000005713	CPSF2	96	85.658	ENSPMEG00000012100	cpsf2	100	85.027	Poecilia_mexicana
ENSOCUG00000005713	CPSF2	100	85.044	ENSPREG00000008960	cpsf2	100	85.044	Poecilia_reticulata
ENSOCUG00000005713	CPSF2	63	98.790	ENSPPYG00000029685	-	100	98.790	Pongo_abelii
ENSOCUG00000005713	CPSF2	100	98.849	ENSPCAG00000012477	CPSF2	100	98.849	Procavia_capensis
ENSOCUG00000005713	CPSF2	100	99.233	ENSPCOG00000026387	CPSF2	100	99.233	Propithecus_coquereli
ENSOCUG00000005713	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSOCUG00000005713	CPSF2	100	85.190	ENSPNYG00000023356	cpsf2	100	85.190	Pundamilia_nyererei
ENSOCUG00000005713	CPSF2	100	86.785	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSOCUG00000005713	CPSF2	100	98.465	ENSRNOG00000005733	Cpsf2	100	98.465	Rattus_norvegicus
ENSOCUG00000005713	CPSF2	100	99.361	ENSRBIG00000044792	CPSF2	100	99.361	Rhinopithecus_bieti
ENSOCUG00000005713	CPSF2	100	99.361	ENSRROG00000034875	CPSF2	100	99.361	Rhinopithecus_roxellana
ENSOCUG00000005713	CPSF2	100	99.233	ENSSBOG00000024571	CPSF2	100	99.233	Saimiri_boliviensis_boliviensis
ENSOCUG00000005713	CPSF2	100	98.721	ENSSHAG00000010458	CPSF2	100	98.721	Sarcophilus_harrisii
ENSOCUG00000005713	CPSF2	100	87.166	ENSSFOG00015002117	cpsf2	100	87.166	Scleropages_formosus
ENSOCUG00000005713	CPSF2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSOCUG00000005713	CPSF2	100	86.185	ENSSDUG00000004084	cpsf2	100	86.185	Seriola_dumerili
ENSOCUG00000005713	CPSF2	100	85.678	ENSSLDG00000024330	cpsf2	100	85.678	Seriola_lalandi_dorsalis
ENSOCUG00000005713	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSOCUG00000005713	CPSF2	100	95.913	ENSSPUG00000013485	CPSF2	100	95.913	Sphenodon_punctatus
ENSOCUG00000005713	CPSF2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSOCUG00000005713	CPSF2	100	99.488	ENSSSCG00000002447	CPSF2	100	99.488	Sus_scrofa
ENSOCUG00000005713	CPSF2	100	96.552	ENSTGUG00000012571	-	100	96.552	Taeniopygia_guttata
ENSOCUG00000005713	CPSF2	100	84.537	ENSTRUG00000003742	cpsf2	100	84.537	Takifugu_rubripes
ENSOCUG00000005713	CPSF2	100	83.439	ENSTNIG00000012228	cpsf2	100	84.197	Tetraodon_nigroviridis
ENSOCUG00000005713	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSOCUG00000005713	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSOCUG00000005713	CPSF2	100	99.488	ENSUAMG00000028071	CPSF2	100	99.488	Ursus_americanus
ENSOCUG00000005713	CPSF2	100	99.488	ENSUMAG00000005029	CPSF2	100	99.488	Ursus_maritimus
ENSOCUG00000005713	CPSF2	99	99.360	ENSVPAG00000003503	CPSF2	100	99.360	Vicugna_pacos
ENSOCUG00000005713	CPSF2	100	99.616	ENSVVUG00000024642	CPSF2	100	99.616	Vulpes_vulpes
ENSOCUG00000005713	CPSF2	100	91.954	ENSXETG00000010289	cpsf2	100	91.954	Xenopus_tropicalis
ENSOCUG00000005713	CPSF2	100	85.551	ENSXCOG00000001764	cpsf2	100	85.551	Xiphophorus_couchianus
ENSOCUG00000005713	CPSF2	100	85.678	ENSXMAG00000017048	cpsf2	100	85.678	Xiphophorus_maculatus