EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000005876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 12703 bases
Position: chrGL018806:663802-676504
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	1	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	2	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	3	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	4	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	5	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	6	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	7	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	8	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	9	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	10	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	11	12
ENSOCUP00000005092	zf-C2H2	PF00096.26	1.7e-70	12	12
ENSOCUP00000005092	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000005877	-	1134	-	ENSOCUP00000005092	378 (aa)	-	G1SPV3

Gene Model

Click here to download ENSOCUG00000005876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000005876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000005876	-	100	41.562	ENSOCUG00000007715	-	82	40.598
ENSOCUG00000005876	-	100	45.299	ENSOCUG00000022361	ZSCAN22	50	41.485
ENSOCUG00000005876	-	100	36.782	ENSOCUG00000024670	ZNF770	75	36.145
ENSOCUG00000005876	-	100	42.105	ENSOCUG00000029223	ZNF699	74	41.799
ENSOCUG00000005876	-	100	46.688	ENSOCUG00000029071	ZNF81	78	41.745
ENSOCUG00000005876	-	100	42.918	ENSOCUG00000029075	ZNF582	63	37.534
ENSOCUG00000005876	-	100	44.828	ENSOCUG00000029133	ZNF768	57	42.614
ENSOCUG00000005876	-	100	44.318	ENSOCUG00000009378	ZNF236	60	44.318
ENSOCUG00000005876	-	100	44.253	ENSOCUG00000029594	-	92	43.391
ENSOCUG00000005876	-	100	47.598	ENSOCUG00000001924	ZFP1	68	53.571
ENSOCUG00000005876	-	100	39.080	ENSOCUG00000029755	-	88	35.613
ENSOCUG00000005876	-	99	38.318	ENSOCUG00000012254	-	53	38.961
ENSOCUG00000005876	-	100	48.918	ENSOCUG00000003561	ZNF2	76	49.074
ENSOCUG00000005876	-	100	46.296	ENSOCUG00000017842	ZNF235	74	45.247
ENSOCUG00000005876	-	98	33.803	ENSOCUG00000012116	OVOL2	63	35.955
ENSOCUG00000005876	-	100	43.915	ENSOCUG00000027634	-	69	44.974
ENSOCUG00000005876	-	99	48.052	ENSOCUG00000005422	SNAI1	77	46.429
ENSOCUG00000005876	-	100	41.841	ENSOCUG00000029391	ZNF668	84	37.831
ENSOCUG00000005876	-	99	31.559	ENSOCUG00000011713	GTF3A	62	31.559
ENSOCUG00000005876	-	100	42.063	ENSOCUG00000029276	-	81	42.063
ENSOCUG00000005876	-	99	37.634	ENSOCUG00000014377	ZNF646	71	35.484
ENSOCUG00000005876	-	100	46.264	ENSOCUG00000029445	-	98	44.444
ENSOCUG00000005876	-	100	48.309	ENSOCUG00000015340	-	90	43.348
ENSOCUG00000005876	-	100	32.632	ENSOCUG00000013454	PRDM5	76	31.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000005876	-	100	38.608	ENSAPOG00000013511	-	50	44.643	Acanthochromis_polyacanthus
ENSOCUG00000005876	-	99	37.500	ENSAPOG00000004328	-	86	39.037	Acanthochromis_polyacanthus
ENSOCUG00000005876	-	100	41.781	ENSACIG00000010739	-	86	43.750	Amphilophus_citrinellus
ENSOCUG00000005876	-	99	38.164	ENSAOCG00000007045	-	82	39.305	Amphiprion_ocellaris
ENSOCUG00000005876	-	100	41.880	ENSAPEG00000001596	-	71	35.979	Amphiprion_percula
ENSOCUG00000005876	-	100	40.267	ENSAPEG00000016483	-	63	40.053	Amphiprion_percula
ENSOCUG00000005876	-	100	39.305	ENSATEG00000006085	-	85	37.198	Anabas_testudineus
ENSOCUG00000005876	-	100	47.619	ENSACAG00000000082	-	99	47.619	Anolis_carolinensis
ENSOCUG00000005876	-	100	45.565	ENSACAG00000025537	-	95	41.322	Anolis_carolinensis
ENSOCUG00000005876	-	100	50.870	ENSAMXG00000035949	-	77	45.415	Astyanax_mexicanus
ENSOCUG00000005876	-	100	44.928	ENSAMXG00000026143	-	97	42.133	Astyanax_mexicanus
ENSOCUG00000005876	-	100	45.198	ENSAMXG00000032237	-	97	43.548	Astyanax_mexicanus
ENSOCUG00000005876	-	100	49.065	ENSAMXG00000033013	-	83	46.256	Astyanax_mexicanus
ENSOCUG00000005876	-	100	49.107	ENSAMXG00000035145	-	63	46.789	Astyanax_mexicanus
ENSOCUG00000005876	-	100	50.000	ENSAMXG00000036257	-	92	50.000	Astyanax_mexicanus
ENSOCUG00000005876	-	100	48.536	ENSAMXG00000012873	-	91	48.387	Astyanax_mexicanus
ENSOCUG00000005876	-	100	39.056	ENSCVAG00000011235	-	86	39.037	Cyprinodon_variegatus
ENSOCUG00000005876	-	99	42.368	ENSELUG00000013357	-	83	37.696	Esox_lucius
ENSOCUG00000005876	-	100	39.362	ENSELUG00000021287	-	77	37.265	Esox_lucius
ENSOCUG00000005876	-	100	42.857	ENSELUG00000013844	-	77	33.333	Esox_lucius
ENSOCUG00000005876	-	100	44.348	ENSFHEG00000019915	-	76	43.750	Fundulus_heteroclitus
ENSOCUG00000005876	-	100	53.571	ENSGMOG00000003238	-	100	53.571	Gadus_morhua
ENSOCUG00000005876	-	100	42.857	ENSGAFG00000003150	-	90	50.000	Gambusia_affinis
ENSOCUG00000005876	-	100	44.286	ENSGAFG00000012977	-	90	44.275	Gambusia_affinis
ENSOCUG00000005876	-	100	45.067	ENSIPUG00000006916	-	77	45.528	Ictalurus_punctatus
ENSOCUG00000005876	-	100	48.108	ENSIPUG00000021556	-	88	49.462	Ictalurus_punctatus
ENSOCUG00000005876	-	100	46.226	ENSIPUG00000004428	-	72	45.370	Ictalurus_punctatus
ENSOCUG00000005876	-	99	46.364	ENSKMAG00000004988	-	86	40.107	Kryptolebias_marmoratus
ENSOCUG00000005876	-	100	43.846	ENSLOCG00000014144	-	99	43.846	Lepisosteus_oculatus
ENSOCUG00000005876	-	100	42.697	ENSLOCG00000014366	-	90	42.697	Lepisosteus_oculatus
ENSOCUG00000005876	-	100	40.849	ENSMAMG00000016542	-	60	40.849	Mastacembelus_armatus
ENSOCUG00000005876	-	100	50.794	ENSMAMG00000019301	-	93	50.794	Mastacembelus_armatus
ENSOCUG00000005876	-	99	46.154	ENSMMOG00000009852	-	92	42.647	Mola_mola
ENSOCUG00000005876	-	100	50.000	ENSMALG00000005554	-	95	43.363	Monopterus_albus
ENSOCUG00000005876	-	100	41.615	ENSPKIG00000006616	-	59	40.496	Paramormyrops_kingsleyae
ENSOCUG00000005876	-	100	37.270	ENSPMGG00000017633	-	87	37.337	Periophthalmus_magnuspinnatus
ENSOCUG00000005876	-	100	45.000	ENSPFOG00000010682	-	99	43.750	Poecilia_formosa
ENSOCUG00000005876	-	100	38.889	ENSPLAG00000002892	-	68	38.889	Poecilia_latipinna
ENSOCUG00000005876	-	100	45.000	ENSPMEG00000001399	-	90	45.038	Poecilia_mexicana
ENSOCUG00000005876	-	100	37.662	ENSPREG00000002582	-	65	45.055	Poecilia_reticulata
ENSOCUG00000005876	-	100	45.000	ENSPREG00000001386	-	90	45.038	Poecilia_reticulata
ENSOCUG00000005876	-	100	47.273	ENSPNAG00000000219	-	86	43.636	Pygocentrus_nattereri
ENSOCUG00000005876	-	100	37.452	ENSPNAG00000025570	-	79	35.106	Pygocentrus_nattereri
ENSOCUG00000005876	-	100	51.256	ENSPNAG00000015116	-	65	47.059	Pygocentrus_nattereri
ENSOCUG00000005876	-	100	44.058	ENSSFOG00015006108	-	58	41.067	Scleropages_formosus
ENSOCUG00000005876	-	100	55.263	ENSSMAG00000009115	-	95	56.757	Scophthalmus_maximus
ENSOCUG00000005876	-	99	48.193	ENSSDUG00000002195	-	98	48.193	Seriola_dumerili
ENSOCUG00000005876	-	99	37.681	ENSSDUG00000006463	-	89	38.770	Seriola_dumerili
ENSOCUG00000005876	-	100	50.769	ENSSLDG00000006724	-	99	50.769	Seriola_lalandi_dorsalis
ENSOCUG00000005876	-	100	45.794	ENSSLDG00000020727	-	97	40.453	Seriola_lalandi_dorsalis
ENSOCUG00000005876	-	100	54.545	ENSSPAG00000021008	-	90	43.860	Stegastes_partitus
ENSOCUG00000005876	-	100	37.657	ENSSPAG00000012960	-	79	36.052	Stegastes_partitus
ENSOCUG00000005876	-	100	47.253	ENSTRUG00000005321	-	93	47.253	Takifugu_rubripes
ENSOCUG00000005876	-	100	46.154	ENSTRUG00000021675	-	77	46.875	Takifugu_rubripes
ENSOCUG00000005876	-	100	53.448	ENSTNIG00000000320	-	99	53.448	Tetraodon_nigroviridis
ENSOCUG00000005876	-	100	38.348	ENSTNIG00000008200	-	99	43.750	Tetraodon_nigroviridis
ENSOCUG00000005876	-	100	46.032	ENSXETG00000006575	znf420	76	47.090	Xenopus_tropicalis
ENSOCUG00000005876	-	96	49.123	ENSXCOG00000009665	-	80	49.123	Xiphophorus_couchianus
ENSOCUG00000005876	-	100	44.286	ENSXMAG00000028625	-	89	44.275	Xiphophorus_maculatus