EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000006122 (Gene tree)
Gene ID: 103346563
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 68359 bases
Position: chrGL019150:75044-143402
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000005310	Ago_hook	PF10427.9	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000006127	TNRC6C-201	9524	-	ENSOCUP00000005310	1611 (aa)	-	G1SQE2

Gene Model

Click here to download ENSOCUG00000006122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000006122	TNRC6C	52	31.271	ENSOCUG00000016128	TNRC6B	79	32.002
ENSOCUG00000006122	TNRC6C	94	36.871	ENSOCUG00000004325	TNRC6A	78	42.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006122	TNRC6C	95	79.452	ENSG00000078687	TNRC6C	92	83.908	Homo_sapiens
ENSOCUG00000006122	TNRC6C	84	45.611	ENSACIG00000008075	tnrc6c1	80	43.451	Amphilophus_citrinellus
ENSOCUG00000006122	TNRC6C	96	77.761	ENSACAG00000016198	TNRC6C	83	77.538	Anolis_carolinensis
ENSOCUG00000006122	TNRC6C	95	77.878	ENSANAG00000021554	TNRC6C	84	80.153	Aotus_nancymaae
ENSOCUG00000006122	TNRC6C	87	55.215	ENSACLG00000000424	tnrc6c1	54	56.857	Astatotilapia_calliptera
ENSOCUG00000006122	TNRC6C	95	80.362	ENSBTAG00000018658	TNRC6C	83	80.426	Bos_taurus
ENSOCUG00000006122	TNRC6C	95	77.778	ENSCJAG00000019431	TNRC6C	84	80.153	Callithrix_jacchus
ENSOCUG00000006122	TNRC6C	95	77.400	ENSCAFG00000005224	TNRC6C	84	79.939	Canis_familiaris
ENSOCUG00000006122	TNRC6C	94	72.233	ENSCHIG00000026004	TNRC6C	82	80.619	Capra_hircus
ENSOCUG00000006122	TNRC6C	59	73.690	ENSCAPG00000007307	TNRC6C	82	75.826	Cavia_aperea
ENSOCUG00000006122	TNRC6C	60	73.984	ENSCPOG00000000467	TNRC6C	82	88.007	Cavia_porcellus
ENSOCUG00000006122	TNRC6C	95	78.078	ENSCCAG00000030524	TNRC6C	84	80.305	Cebus_capucinus
ENSOCUG00000006122	TNRC6C	95	79.452	ENSCATG00000033135	TNRC6C	81	88.421	Cercocebus_atys
ENSOCUG00000006122	TNRC6C	60	75.862	ENSCLAG00000011139	TNRC6C	52	76.369	Chinchilla_lanigera
ENSOCUG00000006122	TNRC6C	95	81.202	ENSCSAG00000005167	TNRC6C	80	88.596	Chlorocebus_sabaeus
ENSOCUG00000006122	TNRC6C	69	86.679	ENSCHOG00000000088	TNRC6C	65	85.027	Choloepus_hoffmanni
ENSOCUG00000006122	TNRC6C	87	68.176	ENSCPBG00000027960	TNRC6C	84	78.274	Chrysemys_picta_bellii
ENSOCUG00000006122	TNRC6C	95	77.778	ENSCANG00000041771	TNRC6C	81	88.070	Colobus_angolensis_palliatus
ENSOCUG00000006122	TNRC6C	95	75.605	ENSCGRG00001022686	Tnrc6c	84	79.059	Cricetulus_griseus_chok1gshd
ENSOCUG00000006122	TNRC6C	95	75.605	ENSCGRG00000018041	Tnrc6c	85	80.031	Cricetulus_griseus_crigri
ENSOCUG00000006122	TNRC6C	96	63.030	ENSDARG00000076847	tnrc6c1	57	62.957	Danio_rerio
ENSOCUG00000006122	TNRC6C	94	72.644	ENSDNOG00000003247	TNRC6C	80	86.926	Dasypus_novemcinctus
ENSOCUG00000006122	TNRC6C	94	69.463	ENSDORG00000004558	Tnrc6c	53	73.163	Dipodomys_ordii
ENSOCUG00000006122	TNRC6C	76	71.068	ENSETEG00000005527	TNRC6C	74	70.920	Echinops_telfairi
ENSOCUG00000006122	TNRC6C	83	71.249	ENSEASG00005004799	TNRC6C	84	79.570	Equus_asinus_asinus
ENSOCUG00000006122	TNRC6C	94	72.074	ENSECAG00000012486	TNRC6C	85	87.478	Equus_caballus
ENSOCUG00000006122	TNRC6C	82	76.780	ENSEEUG00000010008	TNRC6C	81	77.002	Erinaceus_europaeus
ENSOCUG00000006122	TNRC6C	95	75.198	ENSFCAG00000028358	TNRC6C	85	79.020	Felis_catus
ENSOCUG00000006122	TNRC6C	83	73.988	ENSFALG00000000848	TNRC6C	82	74.058	Ficedula_albicollis
ENSOCUG00000006122	TNRC6C	62	46.866	ENSGACG00000012320	tnrc6c1	84	40.875	Gasterosteus_aculeatus
ENSOCUG00000006122	TNRC6C	87	68.021	ENSGAGG00000022043	TNRC6C	84	78.120	Gopherus_agassizii
ENSOCUG00000006122	TNRC6C	95	78.378	ENSGGOG00000011304	TNRC6C	84	80.153	Gorilla_gorilla
ENSOCUG00000006122	TNRC6C	87	55.215	ENSHBUG00000010846	tnrc6c1	54	56.636	Haplochromis_burtoni
ENSOCUG00000006122	TNRC6C	96	76.200	ENSHGLG00000004809	TNRC6C	85	80.492	Heterocephalus_glaber_female
ENSOCUG00000006122	TNRC6C	96	76.200	ENSHGLG00100012597	TNRC6C	85	78.907	Heterocephalus_glaber_male
ENSOCUG00000006122	TNRC6C	96	80.303	ENSSTOG00000009101	TNRC6C	85	80.395	Ictidomys_tridecemlineatus
ENSOCUG00000006122	TNRC6C	96	76.523	ENSJJAG00000017055	Tnrc6c	85	77.225	Jaculus_jaculus
ENSOCUG00000006122	TNRC6C	96	68.372	ENSLOCG00000013377	tnrc6c1	82	69.014	Lepisosteus_oculatus
ENSOCUG00000006122	TNRC6C	87	66.428	ENSLAFG00000011122	TNRC6C	83	85.192	Loxodonta_africana
ENSOCUG00000006122	TNRC6C	83	81.135	ENSMFAG00000043943	TNRC6C	81	88.421	Macaca_fascicularis
ENSOCUG00000006122	TNRC6C	96	81.048	ENSMMUG00000011924	TNRC6C	81	88.421	Macaca_mulatta
ENSOCUG00000006122	TNRC6C	95	79.452	ENSMNEG00000030405	TNRC6C	81	88.421	Macaca_nemestrina
ENSOCUG00000006122	TNRC6C	95	79.452	ENSMLEG00000033436	TNRC6C	81	88.421	Mandrillus_leucophaeus
ENSOCUG00000006122	TNRC6C	87	55.215	ENSMZEG00005010920	tnrc6c1	54	56.857	Maylandia_zebra
ENSOCUG00000006122	TNRC6C	87	72.733	ENSMGAG00000003906	TNRC6C	50	73.283	Meleagris_gallopavo
ENSOCUG00000006122	TNRC6C	83	71.736	ENSMAUG00000021618	Tnrc6c	84	78.452	Mesocricetus_auratus
ENSOCUG00000006122	TNRC6C	95	77.978	ENSMICG00000003952	TNRC6C	84	81.135	Microcebus_murinus
ENSOCUG00000006122	TNRC6C	95	77.218	ENSMOCG00000015879	Tnrc6c	85	77.729	Microtus_ochrogaster
ENSOCUG00000006122	TNRC6C	95	70.352	ENSMODG00000001785	TNRC6C	52	70.289	Monodelphis_domestica
ENSOCUG00000006122	TNRC6C	95	77.016	MGP_CAROLIEiJ_G0017465	Tnrc6c	85	78.907	Mus_caroli
ENSOCUG00000006122	TNRC6C	95	76.613	ENSMUSG00000025571	Tnrc6c	85	78.756	Mus_musculus
ENSOCUG00000006122	TNRC6C	95	76.815	MGP_PahariEiJ_G0018593	Tnrc6c	85	78.907	Mus_pahari
ENSOCUG00000006122	TNRC6C	95	76.815	MGP_SPRETEiJ_G0018309	Tnrc6c	85	78.452	Mus_spretus
ENSOCUG00000006122	TNRC6C	95	75.524	ENSMPUG00000013348	TNRC6C	83	79.939	Mustela_putorius_furo
ENSOCUG00000006122	TNRC6C	59	76.171	ENSMLUG00000014431	TNRC6C	78	82.759	Myotis_lucifugus
ENSOCUG00000006122	TNRC6C	60	77.033	ENSNGAG00000012203	Tnrc6c	85	78.875	Nannospalax_galili
ENSOCUG00000006122	TNRC6C	86	62.007	ENSMEUG00000005104	TNRC6C	84	70.723	Notamacropus_eugenii
ENSOCUG00000006122	TNRC6C	83	56.164	ENSONIG00000002210	tnrc6c1	72	44.163	Oreochromis_niloticus
ENSOCUG00000006122	TNRC6C	83	71.558	ENSOGAG00000007197	TNRC6C	79	86.420	Otolemur_garnettii
ENSOCUG00000006122	TNRC6C	95	75.876	ENSOARG00000006041	TNRC6C	82	80.212	Ovis_aries
ENSOCUG00000006122	TNRC6C	95	76.653	ENSPPAG00000027160	TNRC6C	84	80.153	Pan_paniscus
ENSOCUG00000006122	TNRC6C	95	75.298	ENSPPRG00000018881	TNRC6C	85	79.326	Panthera_pardus
ENSOCUG00000006122	TNRC6C	88	69.682	ENSPTIG00000008791	TNRC6C	50	74.194	Panthera_tigris_altaica
ENSOCUG00000006122	TNRC6C	95	78.278	ENSPTRG00000009699	TNRC6C	84	80.305	Pan_troglodytes
ENSOCUG00000006122	TNRC6C	95	79.452	ENSPANG00000019994	TNRC6C	81	88.421	Papio_anubis
ENSOCUG00000006122	TNRC6C	73	50.521	ENSPMGG00000022911	tnrc6c1	59	47.783	Periophthalmus_magnuspinnatus
ENSOCUG00000006122	TNRC6C	95	76.310	ENSPEMG00000009785	Tnrc6c	86	79.211	Peromyscus_maniculatus_bairdii
ENSOCUG00000006122	TNRC6C	95	54.505	ENSPFOG00000012560	tnrc6c1	81	53.092	Poecilia_formosa
ENSOCUG00000006122	TNRC6C	83	41.942	ENSPLAG00000021055	tnrc6c1	77	54.532	Poecilia_latipinna
ENSOCUG00000006122	TNRC6C	95	78.500	ENSPPYG00000008679	TNRC6C	82	80.305	Pongo_abelii
ENSOCUG00000006122	TNRC6C	76	86.826	ENSPCAG00000012510	TNRC6C	72	87.069	Procavia_capensis
ENSOCUG00000006122	TNRC6C	83	72.905	ENSPCOG00000021451	TNRC6C	84	81.442	Propithecus_coquereli
ENSOCUG00000006122	TNRC6C	86	79.416	ENSPVAG00000002008	TNRC6C	84	79.507	Pteropus_vampyrus
ENSOCUG00000006122	TNRC6C	87	54.237	ENSPNYG00000014477	tnrc6c1	53	55.882	Pundamilia_nyererei
ENSOCUG00000006122	TNRC6C	83	71.897	ENSRNOG00000022395	Tnrc6c	84	80.338	Rattus_norvegicus
ENSOCUG00000006122	TNRC6C	95	79.300	ENSRROG00000042912	TNRC6C	81	88.246	Rhinopithecus_roxellana
ENSOCUG00000006122	TNRC6C	95	79.300	ENSSBOG00000023981	TNRC6C	84	79.186	Saimiri_boliviensis_boliviensis
ENSOCUG00000006122	TNRC6C	59	43.443	ENSSFOG00015004735	-	70	41.360	Scleropages_formosus
ENSOCUG00000006122	TNRC6C	94	59.880	ENSSFOG00015006475	tnrc6c1	79	59.729	Scleropages_formosus
ENSOCUG00000006122	TNRC6C	87	53.997	ENSSMAG00000012761	tnrc6c1	75	59.059	Scophthalmus_maximus
ENSOCUG00000006122	TNRC6C	81	87.425	ENSSARG00000006816	TNRC6C	78	87.273	Sorex_araneus
ENSOCUG00000006122	TNRC6C	72	75.472	ENSSPUG00000007341	TNRC6C	77	80.612	Sphenodon_punctatus
ENSOCUG00000006122	TNRC6C	83	78.808	ENSSSCG00000034373	TNRC6C	82	78.850	Sus_scrofa
ENSOCUG00000006122	TNRC6C	62	45.455	ENSTNIG00000005273	tnrc6c1	63	52.762	Tetraodon_nigroviridis
ENSOCUG00000006122	TNRC6C	56	81.437	ENSTBEG00000005046	TNRC6C	82	89.275	Tupaia_belangeri
ENSOCUG00000006122	TNRC6C	86	79.755	ENSTTRG00000010828	TNRC6C	84	80.154	Tursiops_truncatus
ENSOCUG00000006122	TNRC6C	95	69.719	ENSUMAG00000013614	TNRC6C	85	76.626	Ursus_maritimus
ENSOCUG00000006122	TNRC6C	83	59.516	ENSXETG00000019470	tnrc6c	84	69.697	Xenopus_tropicalis
ENSOCUG00000006122	TNRC6C	92	42.274	ENSXMAG00000025971	tnrc6c1	82	55.083	Xiphophorus_maculatus