EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000006286 (Gene tree)
Gene ID: 100357147
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 3431 bases
Position: chr13:38533035-38536465
Accession: 100357147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000005433	MMR_HSR1	PF01926.23	5.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000006284	-	534	XM_002715478	ENSOCUP00000005433	178 (aa)	XP_002715524	G1SQP0

Gene Model

Click here to download ENSOCUG00000006286's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000006286	-	92	37.725	ENSOCUG00000001645	RAB7A	81	37.725
ENSOCUG00000006286	-	92	38.788	ENSOCUG00000004816	RAB23	69	38.788
ENSOCUG00000006286	-	91	49.383	ENSOCUG00000007580	RAB30	80	49.383
ENSOCUG00000006286	-	93	47.273	ENSOCUG00000014755	RAB11A	76	47.273
ENSOCUG00000006286	-	89	43.671	ENSOCUG00000009297	RAB6A	76	43.671
ENSOCUG00000006286	-	90	39.130	ENSOCUG00000008604	RAB31	83	39.130
ENSOCUG00000006286	-	92	32.121	ENSOCUG00000013173	RHEB	87	32.121
ENSOCUG00000006286	-	93	44.242	ENSOCUG00000013654	RAB14	77	44.242
ENSOCUG00000006286	-	92	41.071	ENSOCUG00000014809	RAB9B	83	41.071
ENSOCUG00000006286	-	76	30.147	ENSOCUG00000024365	ARF5	72	30.147
ENSOCUG00000006286	-	98	56.897	ENSOCUG00000017003	RAB1A	85	56.897
ENSOCUG00000006286	-	95	30.682	ENSOCUG00000011260	DNAJC27	64	30.682
ENSOCUG00000006286	-	95	34.682	ENSOCUG00000000650	RERG	84	34.682
ENSOCUG00000006286	-	93	43.713	ENSOCUG00000022307	RAB18	81	43.713
ENSOCUG00000006286	-	89	46.341	ENSOCUG00000002932	RAB33A	71	46.341
ENSOCUG00000006286	-	90	38.889	ENSOCUG00000012106	KRAS	66	38.889
ENSOCUG00000006286	-	70	30.952	ENSOCUG00000005792	ARL3	66	30.952
ENSOCUG00000006286	-	88	46.795	ENSOCUG00000028208	RAB11B	66	45.614
ENSOCUG00000006286	-	91	30.000	ENSOCUG00000000719	RASL11B	68	30.000
ENSOCUG00000006286	-	94	42.857	ENSOCUG00000005634	RAB25	79	42.857
ENSOCUG00000006286	-	94	47.619	ENSOCUG00000000331	RAB2B	78	47.619
ENSOCUG00000006286	-	66	30.252	ENSOCUG00000000824	ARF4	63	30.252
ENSOCUG00000006286	-	90	37.423	ENSOCUG00000005929	MRAS	78	37.423
ENSOCUG00000006286	-	90	38.272	ENSOCUG00000022455	-	85	38.272
ENSOCUG00000006286	-	89	42.405	ENSOCUG00000009428	RAB6B	76	42.405
ENSOCUG00000006286	-	90	40.373	ENSOCUG00000013895	RAB5B	71	40.373
ENSOCUG00000006286	-	90	43.478	ENSOCUG00000012200	RAB5A	75	43.478
ENSOCUG00000006286	-	78	52.899	ENSOCUG00000025381	RAB3D	63	52.899
ENSOCUG00000006286	-	98	46.629	ENSOCUG00000004254	RAB39B	84	46.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006286	-	100	96.067	ENSG00000143545	RAB13	88	96.067	Homo_sapiens
ENSOCUG00000006286	-	99	83.051	ENSACIG00000008584	rab13	85	83.051	Amphilophus_citrinellus
ENSOCUG00000006286	-	100	96.629	ENSANAG00000030247	-	88	96.629	Aotus_nancymaae
ENSOCUG00000006286	-	99	85.795	ENSAMXG00000030712	rab13	87	85.795	Astyanax_mexicanus
ENSOCUG00000006286	-	99	96.045	ENSBTAG00000017604	RAB13	87	96.045	Bos_taurus
ENSOCUG00000006286	-	91	47.853	WBGene00019317	K02E10.1	75	47.853	Caenorhabditis_elegans
ENSOCUG00000006286	-	100	96.067	ENSCJAG00000009933	-	88	96.067	Callithrix_jacchus
ENSOCUG00000006286	-	99	96.045	ENSCHIG00000022271	-	87	96.045	Capra_hircus
ENSOCUG00000006286	-	99	94.350	ENSCPOG00000011491	-	87	94.350	Cavia_porcellus
ENSOCUG00000006286	-	100	96.067	ENSCCAG00000028502	-	88	96.067	Cebus_capucinus
ENSOCUG00000006286	-	100	96.067	ENSCATG00000041779	-	88	96.067	Cercocebus_atys
ENSOCUG00000006286	-	99	94.915	ENSCLAG00000006603	-	87	94.915	Chinchilla_lanigera
ENSOCUG00000006286	-	100	96.067	ENSCANG00000036573	-	88	96.067	Colobus_angolensis_palliatus
ENSOCUG00000006286	-	100	94.382	ENSCGRG00001021505	Rab13	88	94.382	Cricetulus_griseus_chok1gshd
ENSOCUG00000006286	-	100	94.382	ENSCGRG00000012126	Rab13	88	94.382	Cricetulus_griseus_crigri
ENSOCUG00000006286	-	97	84.393	ENSCSEG00000002358	rab13	87	84.393	Cynoglossus_semilaevis
ENSOCUG00000006286	-	97	86.705	ENSDARG00000034771	rab13	87	86.705	Danio_rerio
ENSOCUG00000006286	-	100	95.506	ENSDORG00000001591	Rab13	88	95.506	Dipodomys_ordii
ENSOCUG00000006286	-	100	95.506	ENSEASG00005000683	-	88	95.506	Equus_asinus_asinus
ENSOCUG00000006286	-	100	95.506	ENSECAG00000016551	RAB13	88	95.506	Equus_caballus
ENSOCUG00000006286	-	100	90.449	ENSEEUG00000001233	-	88	90.449	Erinaceus_europaeus
ENSOCUG00000006286	-	97	85.549	ENSELUG00000012801	rab13	87	85.549	Esox_lucius
ENSOCUG00000006286	-	100	94.944	ENSFCAG00000045269	-	88	94.944	Felis_catus
ENSOCUG00000006286	-	74	96.212	ENSFDAG00000014469	-	100	96.212	Fukomys_damarensis
ENSOCUG00000006286	-	97	85.549	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSOCUG00000006286	-	97	83.815	ENSGACG00000011925	rab13	86	83.815	Gasterosteus_aculeatus
ENSOCUG00000006286	-	97	90.751	ENSGAGG00000000742	-	86	90.751	Gopherus_agassizii
ENSOCUG00000006286	-	100	96.067	ENSGGOG00000023693	RAB13	88	96.067	Gorilla_gorilla
ENSOCUG00000006286	-	99	94.350	ENSHGLG00000008749	RAB13	88	94.350	Heterocephalus_glaber_female
ENSOCUG00000006286	-	99	94.350	ENSHGLG00100013608	RAB13	88	94.350	Heterocephalus_glaber_male
ENSOCUG00000006286	-	97	85.549	ENSHCOG00000007440	rab13	95	85.549	Hippocampus_comes
ENSOCUG00000006286	-	97	85.549	ENSIPUG00000003199	rab13	86	85.549	Ictalurus_punctatus
ENSOCUG00000006286	-	99	96.045	ENSSTOG00000011222	-	87	96.045	Ictidomys_tridecemlineatus
ENSOCUG00000006286	-	99	95.480	ENSJJAG00000010575	Rab13	87	95.480	Jaculus_jaculus
ENSOCUG00000006286	-	100	82.584	ENSKMAG00000001908	rab13	90	83.432	Kryptolebias_marmoratus
ENSOCUG00000006286	-	97	84.971	ENSLBEG00000026779	rab13	87	84.971	Labrus_bergylta
ENSOCUG00000006286	-	97	78.488	ENSLACG00000008103	-	97	78.488	Latimeria_chalumnae
ENSOCUG00000006286	-	100	96.067	ENSMFAG00000041018	RAB13	88	96.067	Macaca_fascicularis
ENSOCUG00000006286	-	100	96.067	ENSMNEG00000028951	-	88	96.067	Macaca_nemestrina
ENSOCUG00000006286	-	100	96.067	ENSMLEG00000042247	-	88	96.067	Mandrillus_leucophaeus
ENSOCUG00000006286	-	97	84.393	ENSMAMG00000014602	rab13	87	84.393	Mastacembelus_armatus
ENSOCUG00000006286	-	100	94.382	ENSMAUG00000015713	Rab13	88	94.382	Mesocricetus_auratus
ENSOCUG00000006286	-	100	94.944	ENSMICG00000010340	-	88	94.944	Microcebus_murinus
ENSOCUG00000006286	-	100	94.944	ENSMOCG00000021448	Rab13	88	94.944	Microtus_ochrogaster
ENSOCUG00000006286	-	100	94.382	ENSMODG00000017295	-	74	94.382	Monodelphis_domestica
ENSOCUG00000006286	-	100	94.382	MGP_CAROLIEiJ_G0025227	Rab13	88	94.382	Mus_caroli
ENSOCUG00000006286	-	100	94.382	ENSMUSG00000027935	Rab13	88	94.382	Mus_musculus
ENSOCUG00000006286	-	100	94.382	MGP_PahariEiJ_G0026671	Rab13	88	94.382	Mus_pahari
ENSOCUG00000006286	-	100	94.944	ENSNGAG00000010309	Rab13	88	94.944	Nannospalax_galili
ENSOCUG00000006286	-	97	83.815	ENSNBRG00000004124	rab13	87	83.815	Neolamprologus_brichardi
ENSOCUG00000006286	-	100	96.067	ENSNLEG00000028944	-	89	95.977	Nomascus_leucogenys
ENSOCUG00000006286	-	100	94.944	ENSMEUG00000009667	-	87	94.944	Notamacropus_eugenii
ENSOCUG00000006286	-	71	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSOCUG00000006286	-	99	93.220	ENSODEG00000010443	-	87	93.220	Octodon_degus
ENSOCUG00000006286	-	99	83.523	ENSONIG00000006340	rab13	87	83.523	Oreochromis_niloticus
ENSOCUG00000006286	-	99	84.659	ENSOMEG00000008210	rab13	87	86.127	Oryzias_melastigma
ENSOCUG00000006286	-	99	94.350	ENSOGAG00000016969	-	88	94.350	Otolemur_garnettii
ENSOCUG00000006286	-	100	96.067	ENSPPAG00000028435	-	88	96.067	Pan_paniscus
ENSOCUG00000006286	-	100	94.944	ENSPPRG00000008865	-	88	94.944	Panthera_pardus
ENSOCUG00000006286	-	100	96.067	ENSPTRG00000001370	RAB13	88	96.067	Pan_troglodytes
ENSOCUG00000006286	-	100	96.067	ENSPANG00000004479	-	88	96.067	Papio_anubis
ENSOCUG00000006286	-	99	83.523	ENSPMGG00000007680	rab13	87	84.971	Periophthalmus_magnuspinnatus
ENSOCUG00000006286	-	61	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSOCUG00000006286	-	100	94.382	ENSPCIG00000029350	-	87	94.382	Phascolarctos_cinereus
ENSOCUG00000006286	-	97	83.815	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSOCUG00000006286	-	97	83.815	ENSPREG00000017567	rab13	87	83.815	Poecilia_reticulata
ENSOCUG00000006286	-	100	96.067	ENSPPYG00000000790	-	88	96.067	Pongo_abelii
ENSOCUG00000006286	-	100	96.067	ENSPCOG00000012189	-	88	96.067	Propithecus_coquereli
ENSOCUG00000006286	-	100	94.382	ENSPVAG00000011095	-	88	94.382	Pteropus_vampyrus
ENSOCUG00000006286	-	97	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSOCUG00000006286	-	100	93.820	ENSRNOG00000016733	Rab13	88	93.820	Rattus_norvegicus
ENSOCUG00000006286	-	100	96.067	ENSRBIG00000008552	-	88	96.067	Rhinopithecus_bieti
ENSOCUG00000006286	-	100	96.067	ENSRROG00000036885	-	88	96.067	Rhinopithecus_roxellana
ENSOCUG00000006286	-	100	96.067	ENSSBOG00000020342	-	88	96.067	Saimiri_boliviensis_boliviensis
ENSOCUG00000006286	-	100	93.820	ENSSHAG00000011866	-	87	93.750	Sarcophilus_harrisii
ENSOCUG00000006286	-	99	96.045	ENSSSCG00000006564	-	87	96.045	Sus_scrofa
ENSOCUG00000006286	-	99	83.616	ENSTRUG00000024177	rab13	89	83.616	Takifugu_rubripes
ENSOCUG00000006286	-	100	96.067	ENSTBEG00000012734	-	88	96.067	Tupaia_belangeri
ENSOCUG00000006286	-	100	96.067	ENSTTRG00000011183	-	88	96.067	Tursiops_truncatus
ENSOCUG00000006286	-	76	84.444	ENSXETG00000020729	rab13	84	84.444	Xenopus_tropicalis
ENSOCUG00000006286	-	97	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus