EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000006320 (Gene tree)
Gene ID: 100338619
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 186978 bases
Position: chr1:52322585-52509562
Accession: 100338619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000016214	ResIII	PF04851.15	1.5e-08	1	1
ENSOCUP00000016214	BRK	PF07533.16	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000022037	SMARCA2-201	5861	XM_002708184	ENSOCUP00000016214	1577 (aa)	XP_002708231	G1TH12

Gene Model

Click here to download ENSOCUG00000006320's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu04714	Thermogenesis	KEGG
ocu05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000006320	SMARCA2	95	71.891	ENSOCUG00000001787	SMARCA4	97	71.648

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006320	SMARCA2	100	97.090	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSOCUG00000006320	SMARCA2	100	79.663	ENSAPOG00000002641	SMARCA2	79	86.234	Acanthochromis_polyacanthus
ENSOCUG00000006320	SMARCA2	90	89.646	ENSAMEG00000012325	SMARCA2	100	98.200	Ailuropoda_melanoleuca
ENSOCUG00000006320	SMARCA2	100	78.745	ENSACIG00000015607	SMARCA2	81	85.220	Amphilophus_citrinellus
ENSOCUG00000006320	SMARCA2	100	79.439	ENSAOCG00000009647	-	80	85.555	Amphiprion_ocellaris
ENSOCUG00000006320	SMARCA2	100	79.663	ENSAPEG00000007646	SMARCA2	79	86.155	Amphiprion_percula
ENSOCUG00000006320	SMARCA2	99	80.443	ENSATEG00000006916	SMARCA2	78	87.310	Anabas_testudineus
ENSOCUG00000006320	SMARCA2	89	90.007	ENSAPLG00000013873	SMARCA2	73	96.347	Anas_platyrhynchos
ENSOCUG00000006320	SMARCA2	100	89.331	ENSACAG00000002423	SMARCA2	100	88.595	Anolis_carolinensis
ENSOCUG00000006320	SMARCA2	100	97.152	ENSANAG00000026498	SMARCA2	100	97.152	Aotus_nancymaae
ENSOCUG00000006320	SMARCA2	100	80.353	ENSACLG00000004248	SMARCA2	81	86.857	Astatotilapia_calliptera
ENSOCUG00000006320	SMARCA2	100	82.114	ENSAMXG00000012404	smarca2	97	82.150	Astyanax_mexicanus
ENSOCUG00000006320	SMARCA2	100	96.453	ENSBTAG00000007494	SMARCA2	100	96.453	Bos_taurus
ENSOCUG00000006320	SMARCA2	99	97.072	ENSCJAG00000010710	SMARCA2	99	96.813	Callithrix_jacchus
ENSOCUG00000006320	SMARCA2	100	96.897	ENSCAFG00000002013	SMARCA2	100	96.897	Canis_familiaris
ENSOCUG00000006320	SMARCA2	77	94.823	ENSCAFG00020026802	SMARCA2	98	94.823	Canis_lupus_dingo
ENSOCUG00000006320	SMARCA2	100	96.453	ENSCHIG00000025863	SMARCA2	100	96.453	Capra_hircus
ENSOCUG00000006320	SMARCA2	100	96.010	ENSTSYG00000003858	SMARCA2	100	96.776	Carlito_syrichta
ENSOCUG00000006320	SMARCA2	99	91.778	ENSCAPG00000002890	SMARCA2	100	92.097	Cavia_aperea
ENSOCUG00000006320	SMARCA2	100	96.205	ENSCPOG00000005475	SMARCA2	100	95.570	Cavia_porcellus
ENSOCUG00000006320	SMARCA2	100	97.150	ENSCCAG00000030636	SMARCA2	100	97.150	Cebus_capucinus
ENSOCUG00000006320	SMARCA2	100	97.025	ENSCATG00000031470	SMARCA2	100	97.025	Cercocebus_atys
ENSOCUG00000006320	SMARCA2	100	96.715	ENSCLAG00000014484	SMARCA2	100	96.715	Chinchilla_lanigera
ENSOCUG00000006320	SMARCA2	94	96.886	ENSCSAG00000008650	SMARCA2	99	96.886	Chlorocebus_sabaeus
ENSOCUG00000006320	SMARCA2	86	90.556	ENSCHOG00000004316	SMARCA2	86	90.556	Choloepus_hoffmanni
ENSOCUG00000006320	SMARCA2	100	91.461	ENSCPBG00000025463	SMARCA2	100	94.954	Chrysemys_picta_bellii
ENSOCUG00000006320	SMARCA2	100	97.340	ENSCANG00000039597	SMARCA2	100	97.340	Colobus_angolensis_palliatus
ENSOCUG00000006320	SMARCA2	100	89.093	ENSCGRG00001002323	Smarca2	80	94.548	Cricetulus_griseus_chok1gshd
ENSOCUG00000006320	SMARCA2	99	76.801	ENSCSEG00000019311	SMARCA2	97	77.158	Cynoglossus_semilaevis
ENSOCUG00000006320	SMARCA2	85	79.451	ENSCVAG00000016571	SMARCA2	75	85.881	Cyprinodon_variegatus
ENSOCUG00000006320	SMARCA2	100	81.898	ENSDARG00000008904	smarca2	97	81.150	Danio_rerio
ENSOCUG00000006320	SMARCA2	100	94.403	ENSDNOG00000006402	SMARCA2	100	95.386	Dasypus_novemcinctus
ENSOCUG00000006320	SMARCA2	100	96.329	ENSDORG00000014832	Smarca2	100	96.266	Dipodomys_ordii
ENSOCUG00000006320	SMARCA2	80	60.154	FBgn0000212	brm	70	62.975	Drosophila_melanogaster
ENSOCUG00000006320	SMARCA2	86	62.081	ENSEBUG00000002449	-	89	66.119	Eptatretus_burgeri
ENSOCUG00000006320	SMARCA2	100	96.643	ENSEASG00005010312	SMARCA2	100	96.643	Equus_asinus_asinus
ENSOCUG00000006320	SMARCA2	66	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSOCUG00000006320	SMARCA2	93	79.715	ENSELUG00000010318	smarca2	96	78.037	Esox_lucius
ENSOCUG00000006320	SMARCA2	100	96.390	ENSFCAG00000001568	SMARCA2	100	96.390	Felis_catus
ENSOCUG00000006320	SMARCA2	100	89.303	ENSFALG00000010416	SMARCA2	87	97.082	Ficedula_albicollis
ENSOCUG00000006320	SMARCA2	99	95.374	ENSFDAG00000010502	SMARCA2	99	95.235	Fukomys_damarensis
ENSOCUG00000006320	SMARCA2	100	79.975	ENSFHEG00000021250	SMARCA2	97	80.038	Fundulus_heteroclitus
ENSOCUG00000006320	SMARCA2	98	77.721	ENSGMOG00000014229	SMARCA2	84	82.515	Gadus_morhua
ENSOCUG00000006320	SMARCA2	100	91.546	ENSGALG00000010164	SMARCA2	100	91.128	Gallus_gallus
ENSOCUG00000006320	SMARCA2	95	76.342	ENSGAFG00000001164	SMARCA2	74	81.356	Gambusia_affinis
ENSOCUG00000006320	SMARCA2	99	79.339	ENSGACG00000014488	SMARCA2	97	78.988	Gasterosteus_aculeatus
ENSOCUG00000006320	SMARCA2	100	91.598	ENSGAGG00000024412	SMARCA2	100	90.250	Gopherus_agassizii
ENSOCUG00000006320	SMARCA2	100	91.912	ENSGGOG00000000513	SMARCA2	85	97.312	Gorilla_gorilla
ENSOCUG00000006320	SMARCA2	100	80.326	ENSHBUG00000006691	SMARCA2	79	87.141	Haplochromis_burtoni
ENSOCUG00000006320	SMARCA2	99	96.178	ENSHGLG00000005215	SMARCA2	99	96.178	Heterocephalus_glaber_female
ENSOCUG00000006320	SMARCA2	100	95.443	ENSHGLG00100010496	SMARCA2	100	95.443	Heterocephalus_glaber_male
ENSOCUG00000006320	SMARCA2	64	86.449	ENSHCOG00000015348	-	74	86.647	Hippocampus_comes
ENSOCUG00000006320	SMARCA2	100	80.435	ENSIPUG00000011060	smarca2	94	80.263	Ictalurus_punctatus
ENSOCUG00000006320	SMARCA2	100	97.025	ENSSTOG00000006812	SMARCA2	100	97.025	Ictidomys_tridecemlineatus
ENSOCUG00000006320	SMARCA2	100	96.591	ENSJJAG00000010867	Smarca2	100	96.591	Jaculus_jaculus
ENSOCUG00000006320	SMARCA2	100	78.827	ENSKMAG00000015844	-	79	86.087	Kryptolebias_marmoratus
ENSOCUG00000006320	SMARCA2	98	83.514	ENSLOCG00000011499	smarca2	82	87.680	Lepisosteus_oculatus
ENSOCUG00000006320	SMARCA2	100	93.930	ENSLAFG00000014061	SMARCA2	83	97.790	Loxodonta_africana
ENSOCUG00000006320	SMARCA2	100	96.132	ENSMFAG00000003814	SMARCA2	100	96.132	Macaca_fascicularis
ENSOCUG00000006320	SMARCA2	100	97.467	ENSMMUG00000015279	SMARCA2	100	97.467	Macaca_mulatta
ENSOCUG00000006320	SMARCA2	100	96.901	ENSMNEG00000041069	SMARCA2	100	96.901	Macaca_nemestrina
ENSOCUG00000006320	SMARCA2	100	94.990	ENSMLEG00000027418	SMARCA2	100	94.990	Mandrillus_leucophaeus
ENSOCUG00000006320	SMARCA2	100	79.457	ENSMAMG00000003056	SMARCA2	98	80.931	Mastacembelus_armatus
ENSOCUG00000006320	SMARCA2	100	80.414	ENSMZEG00005020709	SMARCA2	79	87.061	Maylandia_zebra
ENSOCUG00000006320	SMARCA2	77	77.955	ENSMGAG00000005160	-	100	77.822	Meleagris_gallopavo
ENSOCUG00000006320	SMARCA2	100	96.960	ENSMICG00000005162	SMARCA2	100	96.960	Microcebus_murinus
ENSOCUG00000006320	SMARCA2	100	96.018	ENSMOCG00000001611	Smarca2	100	96.018	Microtus_ochrogaster
ENSOCUG00000006320	SMARCA2	99	78.645	ENSMMOG00000014196	SMARCA2	79	83.863	Mola_mola
ENSOCUG00000006320	SMARCA2	100	91.495	ENSMODG00000003578	SMARCA2	100	91.294	Monodelphis_domestica
ENSOCUG00000006320	SMARCA2	99	80.294	ENSMALG00000009611	SMARCA2	97	80.261	Monopterus_albus
ENSOCUG00000006320	SMARCA2	100	95.778	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.652	Mus_caroli
ENSOCUG00000006320	SMARCA2	100	95.663	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSOCUG00000006320	SMARCA2	100	96.030	MGP_PahariEiJ_G0014334	Smarca2	100	96.030	Mus_pahari
ENSOCUG00000006320	SMARCA2	100	95.715	MGP_SPRETEiJ_G0023759	Smarca2	99	97.951	Mus_spretus
ENSOCUG00000006320	SMARCA2	80	98.126	ENSMPUG00000005171	SMARCA2	94	98.126	Mustela_putorius_furo
ENSOCUG00000006320	SMARCA2	99	91.086	ENSMLUG00000002342	SMARCA2	99	91.121	Myotis_lucifugus
ENSOCUG00000006320	SMARCA2	99	94.118	ENSNGAG00000000108	Smarca2	99	93.930	Nannospalax_galili
ENSOCUG00000006320	SMARCA2	95	67.852	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSOCUG00000006320	SMARCA2	100	94.483	ENSNLEG00000008575	SMARCA2	100	94.483	Nomascus_leucogenys
ENSOCUG00000006320	SMARCA2	100	84.972	ENSMEUG00000009812	SMARCA2	100	84.514	Notamacropus_eugenii
ENSOCUG00000006320	SMARCA2	100	92.137	ENSOPRG00000013474	SMARCA2	100	92.074	Ochotona_princeps
ENSOCUG00000006320	SMARCA2	99	95.114	ENSODEG00000005452	SMARCA2	99	95.556	Octodon_degus
ENSOCUG00000006320	SMARCA2	99	79.887	ENSONIG00000014163	SMARCA2	78	87.879	Oreochromis_niloticus
ENSOCUG00000006320	SMARCA2	100	79.089	ENSORLG00000020820	SMARCA2	79	86.155	Oryzias_latipes
ENSOCUG00000006320	SMARCA2	100	79.200	ENSORLG00015006289	SMARCA2	79	86.155	Oryzias_latipes_hsok
ENSOCUG00000006320	SMARCA2	99	80.268	ENSOMEG00000009736	-	100	79.862	Oryzias_melastigma
ENSOCUG00000006320	SMARCA2	80	99.289	ENSOGAG00000017053	SMARCA2	80	99.289	Otolemur_garnettii
ENSOCUG00000006320	SMARCA2	100	95.196	ENSOARG00000013265	SMARCA2	81	99.054	Ovis_aries
ENSOCUG00000006320	SMARCA2	79	99.679	ENSPPAG00000038717	SMARCA2	85	97.964	Pan_paniscus
ENSOCUG00000006320	SMARCA2	100	96.453	ENSPPRG00000001879	SMARCA2	100	96.453	Panthera_pardus
ENSOCUG00000006320	SMARCA2	100	95.715	ENSPTRG00000051168	SMARCA2	100	94.959	Pan_troglodytes
ENSOCUG00000006320	SMARCA2	100	89.760	ENSPANG00000025121	SMARCA2	100	90.190	Papio_anubis
ENSOCUG00000006320	SMARCA2	100	82.416	ENSPKIG00000018469	-	83	88.477	Paramormyrops_kingsleyae
ENSOCUG00000006320	SMARCA2	100	90.972	ENSPSIG00000006284	SMARCA2	100	89.569	Pelodiscus_sinensis
ENSOCUG00000006320	SMARCA2	98	73.367	ENSPMGG00000013696	-	97	74.146	Periophthalmus_magnuspinnatus
ENSOCUG00000006320	SMARCA2	100	95.446	ENSPEMG00000019821	Smarca2	100	95.446	Peromyscus_maniculatus_bairdii
ENSOCUG00000006320	SMARCA2	94	71.827	ENSPMAG00000005337	-	77	78.641	Petromyzon_marinus
ENSOCUG00000006320	SMARCA2	100	93.287	ENSPCIG00000015658	SMARCA2	100	92.834	Phascolarctos_cinereus
ENSOCUG00000006320	SMARCA2	100	79.205	ENSPFOG00000001856	SMARCA2	79	86.008	Poecilia_formosa
ENSOCUG00000006320	SMARCA2	99	78.849	ENSPLAG00000017829	SMARCA2	79	83.691	Poecilia_latipinna
ENSOCUG00000006320	SMARCA2	99	78.898	ENSPMEG00000001815	-	78	86.076	Poecilia_mexicana
ENSOCUG00000006320	SMARCA2	100	78.655	ENSPREG00000013800	SMARCA2	78	86.313	Poecilia_reticulata
ENSOCUG00000006320	SMARCA2	100	96.707	ENSPPYG00000019258	SMARCA2	100	96.707	Pongo_abelii
ENSOCUG00000006320	SMARCA2	79	84.684	ENSPCAG00000016969	SMARCA2	78	85.190	Procavia_capensis
ENSOCUG00000006320	SMARCA2	100	94.620	ENSPCOG00000025709	SMARCA2	100	94.490	Propithecus_coquereli
ENSOCUG00000006320	SMARCA2	91	98.276	ENSPVAG00000000901	SMARCA2	94	98.276	Pteropus_vampyrus
ENSOCUG00000006320	SMARCA2	100	77.401	ENSPNYG00000004533	SMARCA2	80	82.977	Pundamilia_nyererei
ENSOCUG00000006320	SMARCA2	99	82.584	ENSPNAG00000014635	smarca2	78	89.600	Pygocentrus_nattereri
ENSOCUG00000006320	SMARCA2	100	94.825	ENSRNOG00000011931	Smarca2	100	94.825	Rattus_norvegicus
ENSOCUG00000006320	SMARCA2	100	95.434	ENSRBIG00000038618	SMARCA2	100	95.434	Rhinopithecus_bieti
ENSOCUG00000006320	SMARCA2	100	95.025	ENSRROG00000019271	SMARCA2	99	96.731	Rhinopithecus_roxellana
ENSOCUG00000006320	SMARCA2	100	88.702	ENSSBOG00000034827	SMARCA2	84	97.121	Saimiri_boliviensis_boliviensis
ENSOCUG00000006320	SMARCA2	100	92.970	ENSSHAG00000007884	SMARCA2	100	92.970	Sarcophilus_harrisii
ENSOCUG00000006320	SMARCA2	91	82.951	ENSSFOG00015014870	SMARCA2	97	84.386	Scleropages_formosus
ENSOCUG00000006320	SMARCA2	100	79.812	ENSSMAG00000013707	SMARCA2	97	80.115	Scophthalmus_maximus
ENSOCUG00000006320	SMARCA2	99	80.051	ENSSDUG00000008852	-	96	80.530	Seriola_dumerili
ENSOCUG00000006320	SMARCA2	80	84.894	ENSSLDG00000025449	SMARCA2	78	84.988	Seriola_lalandi_dorsalis
ENSOCUG00000006320	SMARCA2	95	97.126	ENSSARG00000007888	SMARCA2	94	97.126	Sorex_araneus
ENSOCUG00000006320	SMARCA2	95	87.375	ENSSPUG00000001629	SMARCA2	98	85.836	Sphenodon_punctatus
ENSOCUG00000006320	SMARCA2	100	79.652	ENSSPAG00000020091	-	79	86.472	Stegastes_partitus
ENSOCUG00000006320	SMARCA2	100	96.390	ENSSSCG00000005232	SMARCA2	100	96.390	Sus_scrofa
ENSOCUG00000006320	SMARCA2	100	88.184	ENSTGUG00000005460	SMARCA2	81	96.609	Taeniopygia_guttata
ENSOCUG00000006320	SMARCA2	99	78.908	ENSTRUG00000015619	SMARCA2	97	79.884	Takifugu_rubripes
ENSOCUG00000006320	SMARCA2	66	100.000	ENSTBEG00000008767	SMARCA2	72	100.000	Tupaia_belangeri
ENSOCUG00000006320	SMARCA2	95	93.421	ENSTTRG00000002033	SMARCA2	95	93.795	Tursiops_truncatus
ENSOCUG00000006320	SMARCA2	89	94.729	ENSUAMG00000024701	SMARCA2	99	94.729	Ursus_americanus
ENSOCUG00000006320	SMARCA2	92	85.988	ENSVPAG00000001204	SMARCA2	100	85.988	Vicugna_pacos
ENSOCUG00000006320	SMARCA2	76	95.830	ENSVVUG00000004598	SMARCA2	99	95.830	Vulpes_vulpes
ENSOCUG00000006320	SMARCA2	100	83.665	ENSXETG00000015299	smarca2	79	88.950	Xenopus_tropicalis
ENSOCUG00000006320	SMARCA2	89	79.410	ENSXCOG00000011073	SMARCA2	77	85.558	Xiphophorus_couchianus
ENSOCUG00000006320	SMARCA2	100	78.387	ENSXMAG00000015611	SMARCA2	82	86.234	Xiphophorus_maculatus