EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000006338 (Gene tree)
Gene ID: 100349154
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 16133 bases
Position: chr12:60271242-60287374
Accession: 100349154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019339	KH_1	PF00013.29	1.9e-13	1	1
ENSOCUP00000019339	DEAD	PF00270.29	3.6e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000028146	-	4529	XM_008263107	ENSOCUP00000019339	645 (aa)	XP_008261329	G1TQP3

Gene Model

Click here to download ENSOCUG00000006338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000006338	-	98	79.463	ENSOCUG00000025811	-	98	79.463
ENSOCUG00000006338	-	53	31.006	ENSOCUG00000003456	DDX55	59	31.285
ENSOCUG00000006338	-	63	32.143	ENSOCUG00000014532	DDX52	72	31.973
ENSOCUG00000006338	-	58	30.415	ENSOCUG00000008739	DDX31	62	30.415
ENSOCUG00000006338	-	59	33.419	ENSOCUG00000016514	DDX59	62	33.333
ENSOCUG00000006338	-	64	33.796	ENSOCUG00000012586	-	63	33.796
ENSOCUG00000006338	-	55	32.778	ENSOCUG00000010375	EIF4A1	86	32.778
ENSOCUG00000006338	-	68	45.291	ENSOCUG00000026305	DDX5	74	44.912
ENSOCUG00000006338	-	56	30.303	ENSOCUG00000023074	DDX28	73	30.303
ENSOCUG00000006338	-	91	68.930	ENSOCUG00000004437	-	94	68.509
ENSOCUG00000006338	-	54	32.670	ENSOCUG00000005011	EIF4A2	85	32.670
ENSOCUG00000006338	-	63	38.534	ENSOCUG00000012338	DDX3X	66	38.584
ENSOCUG00000006338	-	54	34.358	ENSOCUG00000002879	DDX50	50	34.358
ENSOCUG00000006338	-	69	38.866	ENSOCUG00000001414	DDX23	50	41.928
ENSOCUG00000006338	-	62	36.320	ENSOCUG00000023209	DDX41	72	36.077
ENSOCUG00000006338	-	68	43.973	ENSOCUG00000004982	DDX17	67	43.973
ENSOCUG00000006338	-	53	33.237	ENSOCUG00000005849	DDX6	70	33.237
ENSOCUG00000006338	-	59	35.204	ENSOCUG00000014390	DDX47	84	35.204
ENSOCUG00000006338	-	62	39.078	ENSOCUG00000008597	DDX4	54	39.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006338	-	100	78.000	ENSAMEG00000007851	-	100	78.000	Ailuropoda_melanoleuca
ENSOCUG00000006338	-	100	72.783	ENSBTAG00000021814	-	99	72.086	Bos_taurus
ENSOCUG00000006338	-	100	76.935	ENSCAFG00020010029	-	100	76.935	Canis_lupus_dingo
ENSOCUG00000006338	-	99	73.053	ENSCAFG00020002717	-	99	73.053	Canis_lupus_dingo
ENSOCUG00000006338	-	100	73.006	ENSCHIG00000017351	-	99	72.393	Capra_hircus
ENSOCUG00000006338	-	78	72.244	ENSCAPG00000004247	-	100	76.096	Cavia_aperea
ENSOCUG00000006338	-	100	79.134	ENSCPOG00000003991	-	100	79.134	Cavia_porcellus
ENSOCUG00000006338	-	100	72.377	ENSCLAG00000010261	-	100	72.377	Chinchilla_lanigera
ENSOCUG00000006338	-	61	75.444	ENSCHOG00000003450	-	70	75.444	Choloepus_hoffmanni
ENSOCUG00000006338	-	100	78.980	ENSCGRG00001001145	Ddx43	100	78.825	Cricetulus_griseus_chok1gshd
ENSOCUG00000006338	-	87	83.481	ENSCGRG00000010217	Ddx43	100	83.481	Cricetulus_griseus_crigri
ENSOCUG00000006338	-	100	78.000	ENSDNOG00000017589	-	99	78.000	Dasypus_novemcinctus
ENSOCUG00000006338	-	100	80.835	ENSDORG00000030010	Ddx43	100	80.835	Dipodomys_ordii
ENSOCUG00000006338	-	70	86.431	ENSETEG00000001887	-	71	86.431	Echinops_telfairi
ENSOCUG00000006338	-	100	78.241	ENSEASG00005004346	-	89	77.932	Equus_asinus_asinus
ENSOCUG00000006338	-	100	78.395	ENSECAG00000017971	DDX43	98	78.086	Equus_caballus
ENSOCUG00000006338	-	100	77.589	ENSFCAG00000031631	-	99	77.589	Felis_catus
ENSOCUG00000006338	-	87	80.107	ENSHGLG00000001118	-	100	80.107	Heterocephalus_glaber_female
ENSOCUG00000006338	-	92	78.655	ENSHGLG00100011895	-	93	78.655	Heterocephalus_glaber_male
ENSOCUG00000006338	-	87	73.712	ENSSTOG00000032538	-	100	73.712	Ictidomys_tridecemlineatus
ENSOCUG00000006338	-	100	78.207	ENSJJAG00000014184	Ddx43	100	78.207	Jaculus_jaculus
ENSOCUG00000006338	-	93	79.305	ENSLAFG00000012755	-	99	79.299	Loxodonta_africana
ENSOCUG00000006338	-	100	78.483	ENSMAUG00000001441	Ddx43	100	78.328	Mesocricetus_auratus
ENSOCUG00000006338	-	100	77.315	ENSMOCG00000012956	Ddx43	100	77.658	Microtus_ochrogaster
ENSOCUG00000006338	-	100	77.898	MGP_CAROLIEiJ_G0032467	Ddx43	100	77.280	Mus_caroli
ENSOCUG00000006338	-	100	78.362	ENSMUSG00000070291	Ddx43	100	77.743	Mus_musculus
ENSOCUG00000006338	-	100	71.672	MGP_PahariEiJ_G0015333	Ddx43	100	71.207	Mus_pahari
ENSOCUG00000006338	-	100	78.362	MGP_SPRETEiJ_G0033607	Ddx43	100	77.743	Mus_spretus
ENSOCUG00000006338	-	100	78.516	ENSMPUG00000004342	-	99	78.516	Mustela_putorius_furo
ENSOCUG00000006338	-	100	78.802	ENSMLUG00000017604	-	100	78.802	Myotis_lucifugus
ENSOCUG00000006338	-	100	77.280	ENSNGAG00000015102	Ddx43	100	78.053	Nannospalax_galili
ENSOCUG00000006338	-	75	89.286	ENSOPRG00000013523	-	86	89.286	Ochotona_princeps
ENSOCUG00000006338	-	84	79.374	ENSODEG00000016207	-	99	79.374	Octodon_degus
ENSOCUG00000006338	-	100	72.477	ENSOARG00000010873	-	99	72.643	Ovis_aries
ENSOCUG00000006338	-	100	77.589	ENSPTIG00000017842	-	99	77.589	Panthera_tigris_altaica
ENSOCUG00000006338	-	87	82.948	ENSPEMG00000023986	Ddx43	100	82.948	Peromyscus_maniculatus_bairdii
ENSOCUG00000006338	-	99	75.155	ENSPCAG00000005962	-	99	75.155	Procavia_capensis
ENSOCUG00000006338	-	87	82.801	ENSPVAG00000012718	-	99	82.801	Pteropus_vampyrus
ENSOCUG00000006338	-	100	78.516	ENSRNOG00000050868	Ddx43	100	78.053	Rattus_norvegicus
ENSOCUG00000006338	-	84	81.901	ENSSARG00000013493	-	99	81.901	Sorex_araneus
ENSOCUG00000006338	-	100	72.952	ENSSSCG00000004287	-	99	72.952	Sus_scrofa
ENSOCUG00000006338	-	87	69.805	ENSTTRG00000001488	-	99	69.805	Tursiops_truncatus
ENSOCUG00000006338	-	83	74.583	ENSUAMG00000012894	-	83	74.583	Ursus_americanus
ENSOCUG00000006338	-	100	78.241	ENSUMAG00000012291	-	99	78.241	Ursus_maritimus
ENSOCUG00000006338	-	94	68.852	ENSVPAG00000004969	-	100	68.852	Vicugna_pacos
ENSOCUG00000006338	-	100	77.399	ENSVVUG00000013908	-	100	77.399	Vulpes_vulpes