EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000006554 (Gene tree)
Gene ID: 100340239
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 12486 bases
Position: chr9:91032290-91044775
Accession: 100340239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019971	MBD	PF01429.19	4.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000025233	MBD1-201	2951	XM_002713532	ENSOCUP00000019971	630 (aa)	XP_002713578	G1TSF5

Gene Model

Click here to download ENSOCUG00000006554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006554	MBD1	100	84.311	ENSG00000141644	MBD1	99	90.840	Homo_sapiens
ENSOCUG00000006554	MBD1	100	83.070	ENSAMEG00000000238	MBD1	96	83.070	Ailuropoda_melanoleuca
ENSOCUG00000006554	MBD1	64	44.552	ENSACAG00000006091	-	100	42.459	Anolis_carolinensis
ENSOCUG00000006554	MBD1	100	84.311	ENSANAG00000036253	MBD1	100	83.835	Aotus_nancymaae
ENSOCUG00000006554	MBD1	100	81.962	ENSBTAG00000003801	MBD1	100	81.804	Bos_taurus
ENSOCUG00000006554	MBD1	100	82.893	ENSCJAG00000004959	MBD1	100	82.426	Callithrix_jacchus
ENSOCUG00000006554	MBD1	100	83.360	ENSCAFG00000018928	MBD1	96	83.360	Canis_familiaris
ENSOCUG00000006554	MBD1	99	82.825	ENSCAFG00020024272	MBD1	97	82.825	Canis_lupus_dingo
ENSOCUG00000006554	MBD1	100	82.092	ENSCHIG00000021134	MBD1	100	81.775	Capra_hircus
ENSOCUG00000006554	MBD1	100	83.994	ENSTSYG00000000509	MBD1	100	83.518	Carlito_syrichta
ENSOCUG00000006554	MBD1	98	62.342	ENSCAPG00000015782	MBD1	96	58.147	Cavia_aperea
ENSOCUG00000006554	MBD1	100	68.843	ENSCPOG00000001671	MBD1	96	71.257	Cavia_porcellus
ENSOCUG00000006554	MBD1	100	78.072	ENSCCAG00000034600	MBD1	100	73.333	Cebus_capucinus
ENSOCUG00000006554	MBD1	100	84.311	ENSCATG00000029959	MBD1	100	83.835	Cercocebus_atys
ENSOCUG00000006554	MBD1	100	83.835	ENSCLAG00000007457	MBD1	89	82.884	Chinchilla_lanigera
ENSOCUG00000006554	MBD1	100	80.983	ENSCSAG00000018070	MBD1	100	80.190	Chlorocebus_sabaeus
ENSOCUG00000006554	MBD1	100	83.994	ENSCANG00000033425	MBD1	100	83.518	Colobus_angolensis_palliatus
ENSOCUG00000006554	MBD1	100	69.606	ENSCGRG00001014843	Mbd1	100	68.760	Cricetulus_griseus_chok1gshd
ENSOCUG00000006554	MBD1	99	52.153	ENSCGRG00000014135	Mbd1	96	54.400	Cricetulus_griseus_crigri
ENSOCUG00000006554	MBD1	100	80.666	ENSDNOG00000015998	MBD1	100	80.824	Dasypus_novemcinctus
ENSOCUG00000006554	MBD1	90	72.350	ENSDORG00000013917	Mbd1	97	71.889	Dipodomys_ordii
ENSOCUG00000006554	MBD1	100	83.861	ENSEASG00005003857	MBD1	100	83.861	Equus_asinus_asinus
ENSOCUG00000006554	MBD1	99	83.333	ENSECAG00000011497	MBD1	79	83.333	Equus_caballus
ENSOCUG00000006554	MBD1	100	84.019	ENSFCAG00000015730	MBD1	100	84.019	Felis_catus
ENSOCUG00000006554	MBD1	91	80.455	ENSFDAG00000011085	MBD1	96	66.720	Fukomys_damarensis
ENSOCUG00000006554	MBD1	100	84.152	ENSGGOG00000016966	MBD1	100	83.677	Gorilla_gorilla
ENSOCUG00000006554	MBD1	100	83.677	ENSHGLG00000008740	MBD1	100	82.726	Heterocephalus_glaber_female
ENSOCUG00000006554	MBD1	86	84.889	ENSHGLG00100005198	MBD1	97	84.295	Heterocephalus_glaber_male
ENSOCUG00000006554	MBD1	100	78.003	ENSSTOG00000007780	MBD1	100	76.516	Ictidomys_tridecemlineatus
ENSOCUG00000006554	MBD1	98	66.290	ENSJJAG00000022859	Mbd1	96	66.129	Jaculus_jaculus
ENSOCUG00000006554	MBD1	66	39.234	ENSLACG00000002414	-	52	66.667	Latimeria_chalumnae
ENSOCUG00000006554	MBD1	99	68.045	ENSLAFG00000031328	MBD1	97	68.680	Loxodonta_africana
ENSOCUG00000006554	MBD1	100	84.469	ENSMFAG00000026335	MBD1	100	83.994	Macaca_fascicularis
ENSOCUG00000006554	MBD1	100	84.469	ENSMMUG00000009050	MBD1	100	83.994	Macaca_mulatta
ENSOCUG00000006554	MBD1	100	84.469	ENSMNEG00000038822	MBD1	100	83.994	Macaca_nemestrina
ENSOCUG00000006554	MBD1	100	84.311	ENSMLEG00000043121	MBD1	100	83.835	Mandrillus_leucophaeus
ENSOCUG00000006554	MBD1	100	83.544	ENSMICG00000006414	MBD1	100	84.889	Microcebus_murinus
ENSOCUG00000006554	MBD1	99	62.385	ENSMUSG00000024561	Mbd1	97	61.774	Mus_musculus
ENSOCUG00000006554	MBD1	100	63.053	MGP_PahariEiJ_G0019128	Mbd1	100	62.595	Mus_pahari
ENSOCUG00000006554	MBD1	98	63.707	MGP_SPRETEiJ_G0023304	Mbd1	99	63.084	Mus_spretus
ENSOCUG00000006554	MBD1	100	83.861	ENSMPUG00000008843	MBD1	96	83.861	Mustela_putorius_furo
ENSOCUG00000006554	MBD1	100	81.300	ENSMLUG00000008286	MBD1	96	80.983	Myotis_lucifugus
ENSOCUG00000006554	MBD1	98	64.976	ENSNGAG00000011412	Mbd1	96	63.981	Nannospalax_galili
ENSOCUG00000006554	MBD1	100	83.201	ENSNLEG00000011661	-	100	82.726	Nomascus_leucogenys
ENSOCUG00000006554	MBD1	99	63.607	ENSNLEG00000032711	-	90	63.124	Nomascus_leucogenys
ENSOCUG00000006554	MBD1	100	75.594	ENSOPRG00000007647	MBD1	100	75.277	Ochotona_princeps
ENSOCUG00000006554	MBD1	99	66.077	ENSODEG00000018451	MBD1	97	65.655	Octodon_degus
ENSOCUG00000006554	MBD1	100	81.094	ENSOGAG00000003784	MBD1	96	81.094	Otolemur_garnettii
ENSOCUG00000006554	MBD1	100	81.517	ENSOARG00000004218	MBD1	95	81.359	Ovis_aries
ENSOCUG00000006554	MBD1	100	80.824	ENSPPAG00000038886	MBD1	100	80.032	Pan_paniscus
ENSOCUG00000006554	MBD1	100	84.177	ENSPPRG00000021387	MBD1	100	84.177	Panthera_pardus
ENSOCUG00000006554	MBD1	100	84.019	ENSPTIG00000021231	MBD1	100	84.019	Panthera_tigris_altaica
ENSOCUG00000006554	MBD1	100	84.152	ENSPTRG00000010021	MBD1	100	83.677	Pan_troglodytes
ENSOCUG00000006554	MBD1	100	84.152	ENSPANG00000010867	MBD1	100	83.677	Papio_anubis
ENSOCUG00000006554	MBD1	99	58.385	ENSPEMG00000022630	Mbd1	97	57.566	Peromyscus_maniculatus_bairdii
ENSOCUG00000006554	MBD1	96	46.117	ENSPCIG00000027937	-	79	45.151	Phascolarctos_cinereus
ENSOCUG00000006554	MBD1	100	80.824	ENSPPYG00000009158	MBD1	91	80.032	Pongo_abelii
ENSOCUG00000006554	MBD1	99	67.619	ENSPCAG00000001648	MBD1	93	81.818	Procavia_capensis
ENSOCUG00000006554	MBD1	100	82.726	ENSPCOG00000012450	MBD1	100	86.222	Propithecus_coquereli
ENSOCUG00000006554	MBD1	99	46.357	ENSRNOG00000024104	Mbd1	96	48.125	Rattus_norvegicus
ENSOCUG00000006554	MBD1	100	74.571	ENSRBIG00000041294	MBD1	100	77.338	Rhinopithecus_bieti
ENSOCUG00000006554	MBD1	100	83.994	ENSRROG00000032517	MBD1	100	83.518	Rhinopithecus_roxellana
ENSOCUG00000006554	MBD1	100	82.426	ENSSBOG00000027169	MBD1	100	74.762	Saimiri_boliviensis_boliviensis
ENSOCUG00000006554	MBD1	77	44.399	ENSSHAG00000003661	-	100	44.828	Sarcophilus_harrisii
ENSOCUG00000006554	MBD1	99	81.029	ENSSSCG00000004516	MBD1	100	77.813	Sus_scrofa
ENSOCUG00000006554	MBD1	65	81.250	ENSTBEG00000012651	-	68	81.250	Tupaia_belangeri
ENSOCUG00000006554	MBD1	100	76.108	ENSTTRG00000015523	MBD1	100	76.741	Tursiops_truncatus
ENSOCUG00000006554	MBD1	99	78.135	ENSUAMG00000004752	MBD1	97	78.400	Ursus_americanus
ENSOCUG00000006554	MBD1	99	82.035	ENSUMAG00000002947	MBD1	97	82.035	Ursus_maritimus