EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000006695 (Gene tree)
Gene ID: 100008755
Gene Symbol: LARK
Alias: -
Full Name: RNA-binding protein lark
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 9094 bases
Position: chr1:194277710-194286803
Accession: 100008755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000005783	zf-CCHC	PF00098.23	1.3e-07	1	1
ENSOCUP00000005783	RRM_5	PF13893.6	1.4e-08	1	2
ENSOCUP00000005783	RRM_5	PF13893.6	1.4e-08	2	2
ENSOCUP00000005783	RRM_1	PF00076.22	5.5e-35	1	2
ENSOCUP00000005783	RRM_1	PF00076.22	5.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000006692	-	1327	XM_008273446	ENSOCUP00000005783	359 (aa)	XP_008271668	Q9BDY9

Gene Model

Click here to download ENSOCUG00000006695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000006695	LARK	100	87.397	ENSOCUG00000004731	RBM4	100	87.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006695	LARK	99	63.934	ENSG00000248643	RBM14-RBM4	100	63.836	Homo_sapiens
ENSOCUG00000006695	LARK	100	98.607	ENSG00000173914	RBM4B	100	98.607	Homo_sapiens
ENSOCUG00000006695	LARK	96	98.780	ENSG00000173933	RBM4	97	98.551	Homo_sapiens
ENSOCUG00000006695	LARK	100	87.671	ENSAMEG00000010914	RBM4	100	88.219	Ailuropoda_melanoleuca
ENSOCUG00000006695	LARK	100	98.886	ENSAMEG00000010906	RBM4B	100	98.886	Ailuropoda_melanoleuca
ENSOCUG00000006695	LARK	100	98.329	ENSANAG00000023478	RBM4B	100	98.329	Aotus_nancymaae
ENSOCUG00000006695	LARK	100	88.398	ENSBTAG00000031688	RBM4	100	88.950	Bos_taurus
ENSOCUG00000006695	LARK	100	98.050	ENSBTAG00000000423	RBM4B	100	98.050	Bos_taurus
ENSOCUG00000006695	LARK	100	98.607	ENSCJAG00000013666	RBM4B	100	98.607	Callithrix_jacchus
ENSOCUG00000006695	LARK	100	98.607	ENSCAFG00000012378	RBM4B	100	98.607	Canis_familiaris
ENSOCUG00000006695	LARK	100	87.671	ENSCAFG00000012388	RBM4	100	88.219	Canis_familiaris
ENSOCUG00000006695	LARK	100	98.607	ENSCAFG00020015519	RBM4B	100	98.607	Canis_lupus_dingo
ENSOCUG00000006695	LARK	100	87.671	ENSCAFG00020015515	RBM4	100	88.219	Canis_lupus_dingo
ENSOCUG00000006695	LARK	100	88.398	ENSCHIG00000020613	RBM4	100	88.950	Capra_hircus
ENSOCUG00000006695	LARK	100	98.329	ENSCHIG00000008907	RBM4B	100	98.329	Capra_hircus
ENSOCUG00000006695	LARK	65	94.894	ENSTSYG00000009580	RBM4B	96	94.894	Carlito_syrichta
ENSOCUG00000006695	LARK	100	98.607	ENSCAPG00000009570	RBM4B	100	98.607	Cavia_aperea
ENSOCUG00000006695	LARK	100	87.397	ENSCAPG00000016600	RBM4	97	99.275	Cavia_aperea
ENSOCUG00000006695	LARK	100	98.607	ENSCPOG00000013689	RBM4B	100	98.607	Cavia_porcellus
ENSOCUG00000006695	LARK	100	87.397	ENSCPOG00000013194	RBM4	97	99.275	Cavia_porcellus
ENSOCUG00000006695	LARK	100	98.607	ENSCCAG00000016501	RBM4B	100	98.607	Cebus_capucinus
ENSOCUG00000006695	LARK	56	71.642	ENSCCAG00000023319	-	100	71.642	Cebus_capucinus
ENSOCUG00000006695	LARK	100	98.607	ENSCATG00000035353	RBM4B	100	98.607	Cercocebus_atys
ENSOCUG00000006695	LARK	100	87.397	ENSCLAG00000014756	RBM4	97	99.275	Chinchilla_lanigera
ENSOCUG00000006695	LARK	100	98.607	ENSCLAG00000015287	RBM4B	100	98.607	Chinchilla_lanigera
ENSOCUG00000006695	LARK	100	98.607	ENSCSAG00000008361	RBM4B	100	98.607	Chlorocebus_sabaeus
ENSOCUG00000006695	LARK	62	80.617	ENSCHOG00000009753	RBM14-RBM4	100	81.057	Choloepus_hoffmanni
ENSOCUG00000006695	LARK	100	98.607	ENSCHOG00000002892	RBM4B	100	98.607	Choloepus_hoffmanni
ENSOCUG00000006695	LARK	100	75.591	ENSCPBG00000023800	-	100	75.526	Chrysemys_picta_bellii
ENSOCUG00000006695	LARK	100	98.607	ENSCANG00000021868	RBM4B	100	98.607	Colobus_angolensis_palliatus
ENSOCUG00000006695	LARK	100	93.036	ENSCGRG00001024693	Rbm4b	100	93.593	Cricetulus_griseus_chok1gshd
ENSOCUG00000006695	LARK	100	88.333	ENSCGRG00001016609	-	97	100.000	Cricetulus_griseus_chok1gshd
ENSOCUG00000006695	LARK	100	93.036	ENSCGRG00000012112	Rbm4b	100	93.593	Cricetulus_griseus_crigri
ENSOCUG00000006695	LARK	100	88.333	ENSCGRG00000010183	-	97	100.000	Cricetulus_griseus_crigri
ENSOCUG00000006695	LARK	100	96.936	ENSDNOG00000045639	-	100	96.936	Dasypus_novemcinctus
ENSOCUG00000006695	LARK	100	87.123	ENSDNOG00000032390	RBM4	100	87.671	Dasypus_novemcinctus
ENSOCUG00000006695	LARK	100	98.050	ENSDNOG00000019500	-	100	98.050	Dasypus_novemcinctus
ENSOCUG00000006695	LARK	100	87.328	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
ENSOCUG00000006695	LARK	100	96.379	ENSDORG00000029108	Rbm4b	100	96.379	Dipodomys_ordii
ENSOCUG00000006695	LARK	62	71.493	ENSETEG00000018142	-	100	71.493	Echinops_telfairi
ENSOCUG00000006695	LARK	100	88.643	ENSEASG00005005064	RBM4	100	88.920	Equus_asinus_asinus
ENSOCUG00000006695	LARK	100	98.886	ENSEASG00005005068	RBM4B	100	98.886	Equus_asinus_asinus
ENSOCUG00000006695	LARK	100	98.607	ENSECAG00000022987	RBM4B	100	98.607	Equus_caballus
ENSOCUG00000006695	LARK	100	88.643	ENSECAG00000022940	RBM4	100	88.920	Equus_caballus
ENSOCUG00000006695	LARK	100	91.209	ENSEEUG00000000058	RBM4B	100	91.484	Erinaceus_europaeus
ENSOCUG00000006695	LARK	100	87.671	ENSFCAG00000029651	RBM4	97	98.551	Felis_catus
ENSOCUG00000006695	LARK	100	99.164	ENSFCAG00000007394	RBM4B	100	99.164	Felis_catus
ENSOCUG00000006695	LARK	100	69.730	ENSFALG00000002073	-	100	68.835	Ficedula_albicollis
ENSOCUG00000006695	LARK	100	98.607	ENSFDAG00000015530	RBM4B	100	98.607	Fukomys_damarensis
ENSOCUG00000006695	LARK	100	87.123	ENSFDAG00000005447	RBM4	97	99.275	Fukomys_damarensis
ENSOCUG00000006695	LARK	100	77.867	ENSGALG00000037946	-	100	77.540	Gallus_gallus
ENSOCUG00000006695	LARK	100	75.328	ENSGAGG00000008553	-	100	75.263	Gopherus_agassizii
ENSOCUG00000006695	LARK	100	98.607	ENSGGOG00000011698	RBM4B	100	98.607	Gorilla_gorilla
ENSOCUG00000006695	LARK	79	64.545	ENSHGLG00000000117	-	95	73.259	Heterocephalus_glaber_female
ENSOCUG00000006695	LARK	100	83.008	ENSHGLG00000002853	-	100	83.008	Heterocephalus_glaber_female
ENSOCUG00000006695	LARK	100	87.123	ENSHGLG00000009991	RBM4	97	99.275	Heterocephalus_glaber_female
ENSOCUG00000006695	LARK	100	98.886	ENSHGLG00000016412	-	100	98.886	Heterocephalus_glaber_female
ENSOCUG00000006695	LARK	96	84.257	ENSHGLG00100020033	-	100	84.257	Heterocephalus_glaber_male
ENSOCUG00000006695	LARK	100	79.224	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
ENSOCUG00000006695	LARK	100	98.056	ENSHGLG00100003978	-	100	98.056	Heterocephalus_glaber_male
ENSOCUG00000006695	LARK	100	98.607	ENSSTOG00000011226	RBM4B	100	98.607	Ictidomys_tridecemlineatus
ENSOCUG00000006695	LARK	100	87.397	ENSSTOG00000022811	RBM4	97	98.551	Ictidomys_tridecemlineatus
ENSOCUG00000006695	LARK	100	95.543	ENSJJAG00000020870	Rbm4b	100	95.543	Jaculus_jaculus
ENSOCUG00000006695	LARK	100	94.429	ENSLAFG00000002285	RBM4B	100	94.429	Loxodonta_africana
ENSOCUG00000006695	LARK	100	86.849	ENSLAFG00000028147	-	100	87.671	Loxodonta_africana
ENSOCUG00000006695	LARK	100	98.607	ENSMFAG00000033927	RBM4B	100	98.607	Macaca_fascicularis
ENSOCUG00000006695	LARK	100	98.607	ENSMNEG00000043371	RBM4B	100	98.607	Macaca_nemestrina
ENSOCUG00000006695	LARK	100	98.607	ENSMLEG00000028563	RBM4B	100	98.607	Mandrillus_leucophaeus
ENSOCUG00000006695	LARK	100	93.315	ENSMAUG00000017027	Rbm4b	100	93.593	Mesocricetus_auratus
ENSOCUG00000006695	LARK	100	97.772	ENSMICG00000003820	RBM4B	100	97.772	Microcebus_murinus
ENSOCUG00000006695	LARK	100	93.315	ENSMOCG00000001835	Rbm4b	100	93.872	Microtus_ochrogaster
ENSOCUG00000006695	LARK	100	85.870	ENSMODG00000008056	-	100	86.413	Monodelphis_domestica
ENSOCUG00000006695	LARK	100	88.920	MGP_CAROLIEiJ_G0022516	-	97	100.000	Mus_caroli
ENSOCUG00000006695	LARK	100	97.214	MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.214	Mus_caroli
ENSOCUG00000006695	LARK	99	63.812	MGP_CAROLIEiJ_G0022514	-	100	63.812	Mus_caroli
ENSOCUG00000006695	LARK	100	96.936	ENSMUSG00000033760	Rbm4b	100	96.936	Mus_musculus
ENSOCUG00000006695	LARK	100	88.366	ENSMUSG00000096370	Gm21992	100	88.366	Mus_musculus
ENSOCUG00000006695	LARK	100	88.366	ENSMUSG00000094936	Rbm4	100	100.000	Mus_musculus
ENSOCUG00000006695	LARK	100	88.122	MGP_PahariEiJ_G0014011	-	100	88.398	Mus_pahari
ENSOCUG00000006695	LARK	100	96.657	MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	Mus_pahari
ENSOCUG00000006695	LARK	100	88.122	MGP_PahariEiJ_G0014013	-	97	100.000	Mus_pahari
ENSOCUG00000006695	LARK	100	85.461	MGP_SPRETEiJ_G0023429	-	100	86.170	Mus_spretus
ENSOCUG00000006695	LARK	100	70.588	MGP_SPRETEiJ_G0023428	-	94	70.588	Mus_spretus
ENSOCUG00000006695	LARK	100	70.588	MGP_SPRETEiJ_G0023430	-	100	70.588	Mus_spretus
ENSOCUG00000006695	LARK	100	98.607	ENSMPUG00000003450	RBM4B	100	98.607	Mustela_putorius_furo
ENSOCUG00000006695	LARK	100	87.397	ENSMPUG00000003443	RBM4	100	87.945	Mustela_putorius_furo
ENSOCUG00000006695	LARK	100	95.543	ENSMLUG00000001290	RBM4B	100	95.543	Myotis_lucifugus
ENSOCUG00000006695	LARK	99	85.912	ENSMLUG00000004076	RBM4	95	86.740	Myotis_lucifugus
ENSOCUG00000006695	LARK	100	96.379	ENSNGAG00000016292	Rbm4b	100	96.379	Nannospalax_galili
ENSOCUG00000006695	LARK	100	97.772	ENSNLEG00000006213	RBM4B	100	97.772	Nomascus_leucogenys
ENSOCUG00000006695	LARK	100	88.219	ENSNLEG00000035021	RBM4	97	98.551	Nomascus_leucogenys
ENSOCUG00000006695	LARK	62	81.498	ENSMEUG00000005739	-	100	81.938	Notamacropus_eugenii
ENSOCUG00000006695	LARK	100	88.154	ENSMEUG00000001445	-	100	88.430	Notamacropus_eugenii
ENSOCUG00000006695	LARK	100	87.945	ENSOPRG00000009149	RBM4	100	87.945	Ochotona_princeps
ENSOCUG00000006695	LARK	100	97.772	ENSOPRG00000009158	RBM4B	100	97.772	Ochotona_princeps
ENSOCUG00000006695	LARK	100	98.329	ENSODEG00000017696	-	100	98.329	Octodon_degus
ENSOCUG00000006695	LARK	100	73.538	ENSODEG00000001866	-	100	72.778	Octodon_degus
ENSOCUG00000006695	LARK	100	80.780	ENSOANG00000003143	-	84	79.444	Ornithorhynchus_anatinus
ENSOCUG00000006695	LARK	100	86.944	ENSOANG00000011036	-	100	86.389	Ornithorhynchus_anatinus
ENSOCUG00000006695	LARK	100	98.607	ENSOGAG00000015648	RBM4B	100	98.607	Otolemur_garnettii
ENSOCUG00000006695	LARK	100	87.978	ENSOGAG00000015647	RBM4	100	87.397	Otolemur_garnettii
ENSOCUG00000006695	LARK	100	87.293	ENSOARG00000007700	RBM4	100	87.845	Ovis_aries
ENSOCUG00000006695	LARK	100	96.419	ENSOARG00000007759	RBM4B	100	96.419	Ovis_aries
ENSOCUG00000006695	LARK	100	98.607	ENSPPAG00000015125	RBM4B	100	98.607	Pan_paniscus
ENSOCUG00000006695	LARK	100	98.886	ENSPPRG00000003388	RBM4B	100	98.886	Panthera_pardus
ENSOCUG00000006695	LARK	100	87.671	ENSPPRG00000003533	RBM4	97	98.551	Panthera_pardus
ENSOCUG00000006695	LARK	100	98.886	ENSPTIG00000015426	RBM4B	100	98.886	Panthera_tigris_altaica
ENSOCUG00000006695	LARK	100	79.726	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSOCUG00000006695	LARK	100	98.607	ENSPTRG00000003935	RBM4B	100	98.607	Pan_troglodytes
ENSOCUG00000006695	LARK	100	98.607	ENSPANG00000020672	RBM4B	100	98.607	Papio_anubis
ENSOCUG00000006695	LARK	100	77.688	ENSPSIG00000003430	-	100	77.358	Pelodiscus_sinensis
ENSOCUG00000006695	LARK	77	80.969	ENSPSIG00000003477	-	95	79.795	Pelodiscus_sinensis
ENSOCUG00000006695	LARK	100	96.936	ENSPEMG00000009144	Rbm4b	100	96.936	Peromyscus_maniculatus_bairdii
ENSOCUG00000006695	LARK	100	98.607	ENSPPYG00000003010	RBM4B	100	98.607	Pongo_abelii
ENSOCUG00000006695	LARK	100	87.123	ENSPPYG00000003012	RBM4	100	87.088	Pongo_abelii
ENSOCUG00000006695	LARK	100	88.219	ENSPCAG00000003393	-	100	89.041	Procavia_capensis
ENSOCUG00000006695	LARK	100	98.050	ENSPCOG00000027885	RBM4B	100	98.050	Propithecus_coquereli
ENSOCUG00000006695	LARK	100	98.607	ENSPVAG00000010487	RBM4B	100	98.607	Pteropus_vampyrus
ENSOCUG00000006695	LARK	100	87.397	ENSPVAG00000010486	RBM4	100	87.945	Pteropus_vampyrus
ENSOCUG00000006695	LARK	100	87.397	ENSRNOG00000050741	Rbm4	97	100.000	Rattus_norvegicus
ENSOCUG00000006695	LARK	100	97.493	ENSRNOG00000061795	Rbm4b	100	97.493	Rattus_norvegicus
ENSOCUG00000006695	LARK	100	98.607	ENSRBIG00000019394	RBM4B	100	98.607	Rhinopithecus_bieti
ENSOCUG00000006695	LARK	100	98.607	ENSRROG00000032850	RBM4B	100	98.607	Rhinopithecus_roxellana
ENSOCUG00000006695	LARK	100	98.050	ENSSBOG00000034474	RBM4B	100	98.050	Saimiri_boliviensis_boliviensis
ENSOCUG00000006695	LARK	100	88.056	ENSSHAG00000008386	-	100	87.778	Sarcophilus_harrisii
ENSOCUG00000006695	LARK	100	97.493	ENSSARG00000010710	RBM4B	100	97.493	Sorex_araneus
ENSOCUG00000006695	LARK	100	87.671	ENSSSCG00000032437	RBM4	100	88.219	Sus_scrofa
ENSOCUG00000006695	LARK	78	79.522	ENSTGUG00000016779	-	94	78.425	Taeniopygia_guttata
ENSOCUG00000006695	LARK	64	94.091	ENSTBEG00000003727	-	68	94.836	Tupaia_belangeri
ENSOCUG00000006695	LARK	100	96.657	ENSTBEG00000003748	RBM4B	100	96.657	Tupaia_belangeri
ENSOCUG00000006695	LARK	100	98.886	ENSTTRG00000011166	RBM4B	100	98.886	Tursiops_truncatus
ENSOCUG00000006695	LARK	100	87.123	ENSTTRG00000011164	RBM4	100	87.671	Tursiops_truncatus
ENSOCUG00000006695	LARK	100	98.607	ENSUAMG00000004745	RBM4B	100	98.607	Ursus_americanus
ENSOCUG00000006695	LARK	100	87.671	ENSUAMG00000014882	RBM4	97	98.551	Ursus_americanus
ENSOCUG00000006695	LARK	65	95.319	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
ENSOCUG00000006695	LARK	100	87.397	ENSVPAG00000001949	RBM4	100	87.945	Vicugna_pacos
ENSOCUG00000006695	LARK	100	98.607	ENSVPAG00000001950	RBM4B	100	98.607	Vicugna_pacos
ENSOCUG00000006695	LARK	100	98.607	ENSVVUG00000010619	RBM4B	100	98.607	Vulpes_vulpes
ENSOCUG00000006695	LARK	100	87.123	ENSVVUG00000010622	RBM4	100	87.671	Vulpes_vulpes