EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000006911 (Gene tree)
Gene ID: 100348223
Gene Symbol: CNOT1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 72759 bases
Position: chr5:14388420-14461178
Accession: 100348223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000005981	Not1	PF04054.15	7.1e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000006918	CNOT1-201	11315	XM_002711549	ENSOCUP00000005981	2376 (aa)	XP_002711595	G1SRZ8

Gene Model

Click here to download ENSOCUG00000006911's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006911	CNOT1	100	99.705	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSOCUG00000006911	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSOCUG00000006911	CNOT1	100	99.537	ENSAMEG00000017298	CNOT1	100	99.537	Ailuropoda_melanoleuca
ENSOCUG00000006911	CNOT1	90	89.981	ENSACIG00000016003	cnot1	100	90.261	Amphilophus_citrinellus
ENSOCUG00000006911	CNOT1	100	90.554	ENSAPEG00000022342	cnot1	100	90.470	Amphiprion_percula
ENSOCUG00000006911	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSOCUG00000006911	CNOT1	100	97.689	ENSAPLG00000007162	CNOT1	100	97.689	Anas_platyrhynchos
ENSOCUG00000006911	CNOT1	91	96.243	ENSACAG00000001602	CNOT1	98	96.197	Anolis_carolinensis
ENSOCUG00000006911	CNOT1	100	96.900	ENSANAG00000038198	CNOT1	100	96.900	Aotus_nancymaae
ENSOCUG00000006911	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSOCUG00000006911	CNOT1	100	90.913	ENSAMXG00000013170	cnot1	100	91.505	Astyanax_mexicanus
ENSOCUG00000006911	CNOT1	100	99.790	ENSBTAG00000020782	CNOT1	100	99.790	Bos_taurus
ENSOCUG00000006911	CNOT1	81	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSOCUG00000006911	CNOT1	100	99.663	ENSCJAG00000011318	CNOT1	100	99.663	Callithrix_jacchus
ENSOCUG00000006911	CNOT1	100	99.454	ENSCAFG00000008426	CNOT1	100	99.454	Canis_familiaris
ENSOCUG00000006911	CNOT1	100	98.700	ENSCAFG00020010156	CNOT1	100	99.373	Canis_lupus_dingo
ENSOCUG00000006911	CNOT1	100	99.790	ENSCHIG00000010452	CNOT1	100	99.790	Capra_hircus
ENSOCUG00000006911	CNOT1	100	99.832	ENSTSYG00000006888	CNOT1	100	99.832	Carlito_syrichta
ENSOCUG00000006911	CNOT1	100	95.076	ENSCPOG00000013026	CNOT1	100	95.076	Cavia_porcellus
ENSOCUG00000006911	CNOT1	100	98.106	ENSCCAG00000026333	CNOT1	100	98.106	Cebus_capucinus
ENSOCUG00000006911	CNOT1	100	99.747	ENSCATG00000032625	CNOT1	100	99.747	Cercocebus_atys
ENSOCUG00000006911	CNOT1	100	99.705	ENSCLAG00000006289	CNOT1	100	99.705	Chinchilla_lanigera
ENSOCUG00000006911	CNOT1	100	99.747	ENSCSAG00000004731	CNOT1	100	99.747	Chlorocebus_sabaeus
ENSOCUG00000006911	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSOCUG00000006911	CNOT1	95	98.611	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSOCUG00000006911	CNOT1	100	59.119	ENSCING00000009149	-	100	58.741	Ciona_intestinalis
ENSOCUG00000006911	CNOT1	89	63.160	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSOCUG00000006911	CNOT1	100	97.618	ENSCANG00000040534	CNOT1	100	97.618	Colobus_angolensis_palliatus
ENSOCUG00000006911	CNOT1	100	99.369	ENSCGRG00001016365	Cnot1	100	99.369	Cricetulus_griseus_chok1gshd
ENSOCUG00000006911	CNOT1	100	99.369	ENSCGRG00000001714	Cnot1	100	99.369	Cricetulus_griseus_crigri
ENSOCUG00000006911	CNOT1	100	83.153	ENSCVAG00000018930	cnot1	100	82.986	Cyprinodon_variegatus
ENSOCUG00000006911	CNOT1	100	89.899	ENSDARG00000004174	cnot1	100	89.858	Danio_rerio
ENSOCUG00000006911	CNOT1	100	97.392	ENSDNOG00000013250	CNOT1	100	97.392	Dasypus_novemcinctus
ENSOCUG00000006911	CNOT1	99	46.230	FBgn0085436	Not1	99	48.364	Drosophila_melanogaster
ENSOCUG00000006911	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSOCUG00000006911	CNOT1	81	76.831	ENSEBUG00000011534	cnot1	95	76.831	Eptatretus_burgeri
ENSOCUG00000006911	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSOCUG00000006911	CNOT1	100	99.832	ENSECAG00000009889	CNOT1	100	99.832	Equus_caballus
ENSOCUG00000006911	CNOT1	90	99.451	ENSEEUG00000006015	CNOT1	90	99.451	Erinaceus_europaeus
ENSOCUG00000006911	CNOT1	100	89.818	ENSELUG00000014085	cnot1	100	89.500	Esox_lucius
ENSOCUG00000006911	CNOT1	100	99.538	ENSFCAG00000025155	CNOT1	100	99.538	Felis_catus
ENSOCUG00000006911	CNOT1	100	97.727	ENSFALG00000007285	CNOT1	100	97.727	Ficedula_albicollis
ENSOCUG00000006911	CNOT1	100	99.621	ENSFDAG00000013399	CNOT1	100	99.621	Fukomys_damarensis
ENSOCUG00000006911	CNOT1	100	90.424	ENSFHEG00000020574	cnot1	100	90.382	Fundulus_heteroclitus
ENSOCUG00000006911	CNOT1	91	89.403	ENSGMOG00000012864	cnot1	100	89.820	Gadus_morhua
ENSOCUG00000006911	CNOT1	100	97.769	ENSGALG00000002301	CNOT1	100	97.769	Gallus_gallus
ENSOCUG00000006911	CNOT1	100	89.169	ENSGAFG00000015005	cnot1	100	89.169	Gambusia_affinis
ENSOCUG00000006911	CNOT1	91	90.241	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSOCUG00000006911	CNOT1	100	97.854	ENSGAGG00000022646	CNOT1	100	97.854	Gopherus_agassizii
ENSOCUG00000006911	CNOT1	100	99.663	ENSGGOG00000009547	CNOT1	100	99.663	Gorilla_gorilla
ENSOCUG00000006911	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSOCUG00000006911	CNOT1	100	99.537	ENSHGLG00000014322	CNOT1	100	99.537	Heterocephalus_glaber_female
ENSOCUG00000006911	CNOT1	100	89.423	ENSHCOG00000006501	cnot1	100	89.520	Hippocampus_comes
ENSOCUG00000006911	CNOT1	100	88.884	ENSIPUG00000011915	cnot1	100	89.346	Ictalurus_punctatus
ENSOCUG00000006911	CNOT1	100	99.621	ENSSTOG00000005490	CNOT1	100	99.621	Ictidomys_tridecemlineatus
ENSOCUG00000006911	CNOT1	100	99.032	ENSJJAG00000000633	Cnot1	100	99.032	Jaculus_jaculus
ENSOCUG00000006911	CNOT1	100	90.335	ENSKMAG00000006149	cnot1	100	90.134	Kryptolebias_marmoratus
ENSOCUG00000006911	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSOCUG00000006911	CNOT1	100	95.034	ENSLACG00000010869	CNOT1	100	95.034	Latimeria_chalumnae
ENSOCUG00000006911	CNOT1	100	92.953	ENSLOCG00000006324	cnot1	100	92.953	Lepisosteus_oculatus
ENSOCUG00000006911	CNOT1	100	99.579	ENSLAFG00000000098	CNOT1	100	99.579	Loxodonta_africana
ENSOCUG00000006911	CNOT1	100	99.495	ENSMFAG00000035888	CNOT1	100	99.495	Macaca_fascicularis
ENSOCUG00000006911	CNOT1	100	99.705	ENSMMUG00000014625	CNOT1	100	99.705	Macaca_mulatta
ENSOCUG00000006911	CNOT1	100	96.937	ENSMNEG00000031820	CNOT1	100	99.766	Macaca_nemestrina
ENSOCUG00000006911	CNOT1	100	98.316	ENSMLEG00000040933	CNOT1	100	98.316	Mandrillus_leucophaeus
ENSOCUG00000006911	CNOT1	100	89.173	ENSMAMG00000016524	cnot1	100	89.211	Mastacembelus_armatus
ENSOCUG00000006911	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSOCUG00000006911	CNOT1	100	97.517	ENSMGAG00000001908	CNOT1	100	97.517	Meleagris_gallopavo
ENSOCUG00000006911	CNOT1	100	99.705	ENSMICG00000007071	CNOT1	100	99.705	Microcebus_murinus
ENSOCUG00000006911	CNOT1	100	99.411	ENSMOCG00000017969	Cnot1	100	99.411	Microtus_ochrogaster
ENSOCUG00000006911	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSOCUG00000006911	CNOT1	100	97.939	ENSMODG00000014199	CNOT1	100	97.939	Monodelphis_domestica
ENSOCUG00000006911	CNOT1	100	90.256	ENSMALG00000008645	cnot1	100	90.256	Monopterus_albus
ENSOCUG00000006911	CNOT1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSOCUG00000006911	CNOT1	100	99.453	ENSMUSG00000036550	Cnot1	100	99.453	Mus_musculus
ENSOCUG00000006911	CNOT1	100	99.411	MGP_PahariEiJ_G0023028	Cnot1	100	99.411	Mus_pahari
ENSOCUG00000006911	CNOT1	100	99.453	MGP_SPRETEiJ_G0032549	Cnot1	100	99.453	Mus_spretus
ENSOCUG00000006911	CNOT1	100	99.832	ENSMPUG00000004830	CNOT1	100	99.832	Mustela_putorius_furo
ENSOCUG00000006911	CNOT1	100	99.242	ENSMLUG00000003728	CNOT1	100	99.242	Myotis_lucifugus
ENSOCUG00000006911	CNOT1	100	99.663	ENSNGAG00000018628	Cnot1	100	99.663	Nannospalax_galili
ENSOCUG00000006911	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSOCUG00000006911	CNOT1	100	99.621	ENSNLEG00000003566	CNOT1	100	99.621	Nomascus_leucogenys
ENSOCUG00000006911	CNOT1	86	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSOCUG00000006911	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSOCUG00000006911	CNOT1	100	99.579	ENSODEG00000016337	CNOT1	100	99.579	Octodon_degus
ENSOCUG00000006911	CNOT1	100	90.578	ENSONIG00000007358	cnot1	100	90.369	Oreochromis_niloticus
ENSOCUG00000006911	CNOT1	91	98.001	ENSOANG00000012109	CNOT1	100	98.307	Ornithorhynchus_anatinus
ENSOCUG00000006911	CNOT1	100	90.356	ENSORLG00000013734	cnot1	100	90.394	Oryzias_latipes
ENSOCUG00000006911	CNOT1	100	88.912	ENSORLG00020017012	cnot1	100	88.549	Oryzias_latipes_hni
ENSOCUG00000006911	CNOT1	100	88.828	ENSORLG00015007091	cnot1	100	88.297	Oryzias_latipes_hsok
ENSOCUG00000006911	CNOT1	100	88.124	ENSOMEG00000015124	cnot1	100	88.455	Oryzias_melastigma
ENSOCUG00000006911	CNOT1	100	99.663	ENSOGAG00000000543	CNOT1	100	99.663	Otolemur_garnettii
ENSOCUG00000006911	CNOT1	100	99.790	ENSOARG00000001567	CNOT1	100	99.790	Ovis_aries
ENSOCUG00000006911	CNOT1	100	99.705	ENSPPAG00000022013	CNOT1	100	99.705	Pan_paniscus
ENSOCUG00000006911	CNOT1	100	99.832	ENSPPRG00000004867	CNOT1	100	99.832	Panthera_pardus
ENSOCUG00000006911	CNOT1	100	99.832	ENSPTIG00000012589	CNOT1	100	99.832	Panthera_tigris_altaica
ENSOCUG00000006911	CNOT1	100	99.413	ENSPTRG00000008183	CNOT1	100	99.413	Pan_troglodytes
ENSOCUG00000006911	CNOT1	100	96.186	ENSPANG00000020901	CNOT1	100	96.186	Papio_anubis
ENSOCUG00000006911	CNOT1	100	92.153	ENSPKIG00000023538	CNOT1	100	92.321	Paramormyrops_kingsleyae
ENSOCUG00000006911	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSOCUG00000006911	CNOT1	100	97.727	ENSPSIG00000005499	CNOT1	100	97.727	Pelodiscus_sinensis
ENSOCUG00000006911	CNOT1	100	81.166	ENSPMAG00000009381	cnot1	100	81.066	Petromyzon_marinus
ENSOCUG00000006911	CNOT1	100	96.829	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSOCUG00000006911	CNOT1	99	89.767	ENSPFOG00000003497	cnot1	100	89.776	Poecilia_formosa
ENSOCUG00000006911	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSOCUG00000006911	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSOCUG00000006911	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSOCUG00000006911	CNOT1	100	99.663	ENSPPYG00000007410	CNOT1	100	99.663	Pongo_abelii
ENSOCUG00000006911	CNOT1	90	97.615	ENSPCAG00000003241	CNOT1	90	97.615	Procavia_capensis
ENSOCUG00000006911	CNOT1	100	99.454	ENSPCOG00000027139	CNOT1	100	99.454	Propithecus_coquereli
ENSOCUG00000006911	CNOT1	100	97.180	ENSPVAG00000004243	CNOT1	100	97.180	Pteropus_vampyrus
ENSOCUG00000006911	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSOCUG00000006911	CNOT1	100	89.903	ENSPNAG00000000246	cnot1	100	90.324	Pygocentrus_nattereri
ENSOCUG00000006911	CNOT1	100	99.369	ENSRNOG00000012271	Cnot1	100	99.369	Rattus_norvegicus
ENSOCUG00000006911	CNOT1	100	97.398	ENSRBIG00000044598	CNOT1	100	97.398	Rhinopithecus_bieti
ENSOCUG00000006911	CNOT1	100	99.747	ENSRROG00000000906	CNOT1	100	99.747	Rhinopithecus_roxellana
ENSOCUG00000006911	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSOCUG00000006911	CNOT1	100	95.270	ENSSBOG00000029155	CNOT1	100	95.270	Saimiri_boliviensis_boliviensis
ENSOCUG00000006911	CNOT1	100	98.108	ENSSHAG00000012187	CNOT1	100	98.108	Sarcophilus_harrisii
ENSOCUG00000006911	CNOT1	100	90.650	ENSSFOG00015017614	cnot1	100	90.310	Scleropages_formosus
ENSOCUG00000006911	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSOCUG00000006911	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSOCUG00000006911	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSOCUG00000006911	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSOCUG00000006911	CNOT1	100	90.642	ENSSPAG00000018802	cnot1	100	90.390	Stegastes_partitus
ENSOCUG00000006911	CNOT1	100	99.663	ENSSSCG00000002799	CNOT1	100	99.663	Sus_scrofa
ENSOCUG00000006911	CNOT1	100	97.604	ENSTGUG00000005919	CNOT1	100	97.604	Taeniopygia_guttata
ENSOCUG00000006911	CNOT1	100	89.028	ENSTNIG00000018706	cnot1	100	88.875	Tetraodon_nigroviridis
ENSOCUG00000006911	CNOT1	80	99.296	ENSTBEG00000000720	CNOT1	80	99.296	Tupaia_belangeri
ENSOCUG00000006911	CNOT1	95	99.476	ENSTTRG00000008460	CNOT1	95	99.476	Tursiops_truncatus
ENSOCUG00000006911	CNOT1	100	99.832	ENSUAMG00000009251	CNOT1	100	99.832	Ursus_americanus
ENSOCUG00000006911	CNOT1	100	99.832	ENSUMAG00000021291	CNOT1	100	99.832	Ursus_maritimus
ENSOCUG00000006911	CNOT1	97	97.317	ENSVPAG00000008846	CNOT1	97	97.317	Vicugna_pacos
ENSOCUG00000006911	CNOT1	100	98.700	ENSVVUG00000024037	CNOT1	100	99.373	Vulpes_vulpes
ENSOCUG00000006911	CNOT1	100	90.218	ENSXETG00000015900	cnot1	100	90.008	Xenopus_tropicalis
ENSOCUG00000006911	CNOT1	100	89.337	ENSXCOG00000013552	cnot1	100	89.337	Xiphophorus_couchianus
ENSOCUG00000006911	CNOT1	100	89.379	ENSXMAG00000006031	cnot1	100	89.379	Xiphophorus_maculatus