EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000006948 (Gene tree)
Gene ID: 100351956
Gene Symbol: XRCC6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 29291 bases
Position: chrGL018734:848359-877649
Accession: 100351956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000006009	SAP	PF02037.27	3.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000006949	XRCC6-201	3236	-	ENSOCUP00000006009	608 (aa)	XP_002721433	G1SS22

Gene Model

Click here to download ENSOCUG00000006948's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000006948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000006948	XRCC6	100	86.535	ENSG00000196419	XRCC6	100	86.207	Homo_sapiens
ENSOCUG00000006948	XRCC6	99	55.354	ENSAPOG00000012704	xrcc6	99	55.189	Acanthochromis_polyacanthus
ENSOCUG00000006948	XRCC6	99	55.519	ENSACIG00000021277	xrcc6	99	55.519	Amphilophus_citrinellus
ENSOCUG00000006948	XRCC6	99	54.605	ENSAOCG00000021344	xrcc6	99	54.441	Amphiprion_ocellaris
ENSOCUG00000006948	XRCC6	99	54.934	ENSAPEG00000020712	xrcc6	99	54.770	Amphiprion_percula
ENSOCUG00000006948	XRCC6	99	55.684	ENSATEG00000007119	xrcc6	99	55.848	Anabas_testudineus
ENSOCUG00000006948	XRCC6	91	70.236	ENSAPLG00000004469	XRCC6	99	70.236	Anas_platyrhynchos
ENSOCUG00000006948	XRCC6	100	75.369	ENSANAG00000035230	-	100	75.205	Aotus_nancymaae
ENSOCUG00000006948	XRCC6	100	86.535	ENSANAG00000018684	XRCC6	100	86.207	Aotus_nancymaae
ENSOCUG00000006948	XRCC6	100	73.409	ENSANAG00000023445	-	100	73.083	Aotus_nancymaae
ENSOCUG00000006948	XRCC6	100	77.632	ENSANAG00000020017	-	100	76.974	Aotus_nancymaae
ENSOCUG00000006948	XRCC6	99	55.519	ENSACLG00000018608	xrcc6	99	55.519	Astatotilapia_calliptera
ENSOCUG00000006948	XRCC6	99	57.401	ENSAMXG00000007545	xrcc6	99	57.072	Astyanax_mexicanus
ENSOCUG00000006948	XRCC6	100	86.371	ENSCJAG00000045512	XRCC6	100	86.043	Callithrix_jacchus
ENSOCUG00000006948	XRCC6	99	86.184	ENSTSYG00000011348	XRCC6	99	86.184	Carlito_syrichta
ENSOCUG00000006948	XRCC6	92	87.812	ENSCCAG00000030468	-	100	87.188	Cebus_capucinus
ENSOCUG00000006948	XRCC6	100	68.801	ENSCCAG00000035711	-	100	68.473	Cebus_capucinus
ENSOCUG00000006948	XRCC6	100	71.053	ENSCCAG00000037663	-	97	70.230	Cebus_capucinus
ENSOCUG00000006948	XRCC6	100	81.117	ENSCCAG00000030041	-	95	80.788	Cebus_capucinus
ENSOCUG00000006948	XRCC6	100	86.371	ENSCATG00000042366	XRCC6	100	86.043	Cercocebus_atys
ENSOCUG00000006948	XRCC6	99	89.274	ENSCLAG00000016669	XRCC6	99	89.274	Chinchilla_lanigera
ENSOCUG00000006948	XRCC6	100	86.371	ENSCSAG00000005784	XRCC6	100	86.043	Chlorocebus_sabaeus
ENSOCUG00000006948	XRCC6	99	73.970	ENSCPBG00000020535	XRCC6	99	73.970	Chrysemys_picta_bellii
ENSOCUG00000006948	XRCC6	95	34.130	ENSCING00000000633	-	95	34.134	Ciona_intestinalis
ENSOCUG00000006948	XRCC6	100	86.371	ENSCANG00000031032	XRCC6	100	86.043	Colobus_angolensis_palliatus
ENSOCUG00000006948	XRCC6	99	80.395	ENSCGRG00001019029	Xrcc6	99	79.736	Cricetulus_griseus_chok1gshd
ENSOCUG00000006948	XRCC6	99	87.809	ENSCGRG00000001528	Xrcc6	99	87.150	Cricetulus_griseus_crigri
ENSOCUG00000006948	XRCC6	99	55.646	ENSCSEG00000020434	xrcc6	99	55.319	Cynoglossus_semilaevis
ENSOCUG00000006948	XRCC6	99	56.086	ENSCVAG00000002189	xrcc6	99	55.757	Cyprinodon_variegatus
ENSOCUG00000006948	XRCC6	99	57.800	ENSDARG00000071551	xrcc6	95	58.692	Danio_rerio
ENSOCUG00000006948	XRCC6	78	80.000	ENSETEG00000015333	-	78	81.538	Echinops_telfairi
ENSOCUG00000006948	XRCC6	99	86.656	ENSEASG00005001514	XRCC6	99	86.656	Equus_asinus_asinus
ENSOCUG00000006948	XRCC6	99	86.161	ENSECAG00000017563	XRCC6	99	86.275	Equus_caballus
ENSOCUG00000006948	XRCC6	100	54.486	ENSELUG00000020301	xrcc6	100	53.997	Esox_lucius
ENSOCUG00000006948	XRCC6	100	69.771	ENSFALG00000011908	XRCC6	97	69.935	Ficedula_albicollis
ENSOCUG00000006948	XRCC6	99	57.237	ENSFHEG00000016833	xrcc6	99	56.743	Fundulus_heteroclitus
ENSOCUG00000006948	XRCC6	99	48.355	ENSGMOG00000013524	xrcc6	99	48.026	Gadus_morhua
ENSOCUG00000006948	XRCC6	99	68.903	ENSGALG00000011932	XRCC6	99	68.903	Gallus_gallus
ENSOCUG00000006948	XRCC6	99	55.921	ENSGAFG00000008130	xrcc6	99	55.757	Gambusia_affinis
ENSOCUG00000006948	XRCC6	99	54.426	ENSGACG00000004868	xrcc6	99	54.426	Gasterosteus_aculeatus
ENSOCUG00000006948	XRCC6	99	73.641	ENSGAGG00000017518	XRCC6	99	73.641	Gopherus_agassizii
ENSOCUG00000006948	XRCC6	100	86.700	ENSGGOG00000015885	XRCC6	100	86.371	Gorilla_gorilla
ENSOCUG00000006948	XRCC6	91	56.506	ENSHBUG00000023281	xrcc6	99	56.506	Haplochromis_burtoni
ENSOCUG00000006948	XRCC6	99	86.964	ENSHGLG00000018078	XRCC6	99	86.139	Heterocephalus_glaber_female
ENSOCUG00000006948	XRCC6	99	86.964	ENSHGLG00100011264	XRCC6	99	86.139	Heterocephalus_glaber_male
ENSOCUG00000006948	XRCC6	99	54.201	ENSHCOG00000009821	xrcc6	95	54.922	Hippocampus_comes
ENSOCUG00000006948	XRCC6	95	57.633	ENSIPUG00000000767	xrcc6	95	57.586	Ictalurus_punctatus
ENSOCUG00000006948	XRCC6	99	89.621	ENSSTOG00000009490	XRCC6	99	89.621	Ictidomys_tridecemlineatus
ENSOCUG00000006948	XRCC6	99	81.219	ENSJJAG00000017136	Xrcc6	99	82.208	Jaculus_jaculus
ENSOCUG00000006948	XRCC6	99	57.072	ENSKMAG00000002141	xrcc6	99	56.579	Kryptolebias_marmoratus
ENSOCUG00000006948	XRCC6	99	56.086	ENSLBEG00000002691	xrcc6	98	55.757	Labrus_bergylta
ENSOCUG00000006948	XRCC6	90	61.765	ENSLOCG00000011533	xrcc6	99	61.765	Lepisosteus_oculatus
ENSOCUG00000006948	XRCC6	100	86.371	ENSMFAG00000003352	XRCC6	100	86.043	Macaca_fascicularis
ENSOCUG00000006948	XRCC6	100	86.371	ENSMMUG00000001856	XRCC6	100	86.043	Macaca_mulatta
ENSOCUG00000006948	XRCC6	100	86.371	ENSMNEG00000035076	XRCC6	100	86.043	Macaca_nemestrina
ENSOCUG00000006948	XRCC6	100	86.371	ENSMLEG00000019869	XRCC6	100	86.043	Mandrillus_leucophaeus
ENSOCUG00000006948	XRCC6	99	54.844	ENSMAMG00000003368	xrcc6	99	54.844	Mastacembelus_armatus
ENSOCUG00000006948	XRCC6	95	55.232	ENSMAMG00000003405	xrcc6	96	55.250	Mastacembelus_armatus
ENSOCUG00000006948	XRCC6	99	55.519	ENSMZEG00005028080	xrcc6	99	55.519	Maylandia_zebra
ENSOCUG00000006948	XRCC6	99	68.412	ENSMGAG00000012146	XRCC6	99	68.189	Meleagris_gallopavo
ENSOCUG00000006948	XRCC6	99	88.138	ENSMAUG00000017340	Xrcc6	99	87.644	Mesocricetus_auratus
ENSOCUG00000006948	XRCC6	99	87.315	ENSMOCG00000015717	Xrcc6	99	86.656	Microtus_ochrogaster
ENSOCUG00000006948	XRCC6	99	54.276	ENSMMOG00000003536	xrcc6	99	54.112	Mola_mola
ENSOCUG00000006948	XRCC6	99	56.672	ENSMALG00000013912	xrcc6	94	56.672	Monopterus_albus
ENSOCUG00000006948	XRCC6	99	80.890	MGP_CAROLIEiJ_G0020067	Xrcc6	99	80.231	Mus_caroli
ENSOCUG00000006948	XRCC6	99	86.491	ENSMUSG00000022471	Xrcc6	99	85.832	Mus_musculus
ENSOCUG00000006948	XRCC6	99	85.502	MGP_PahariEiJ_G0020069	Xrcc6	99	84.843	Mus_pahari
ENSOCUG00000006948	XRCC6	96	85.860	MGP_SPRETEiJ_G0020967	Xrcc6	99	86.379	Mus_spretus
ENSOCUG00000006948	XRCC6	99	86.491	ENSNGAG00000013750	Xrcc6	99	85.832	Nannospalax_galili
ENSOCUG00000006948	XRCC6	99	56.178	ENSNBRG00000004125	xrcc6	99	56.178	Neolamprologus_brichardi
ENSOCUG00000006948	XRCC6	95	90.345	ENSOPRG00000002386	XRCC6	99	90.328	Ochotona_princeps
ENSOCUG00000006948	XRCC6	99	85.974	ENSODEG00000015847	XRCC6	99	85.974	Octodon_degus
ENSOCUG00000006948	XRCC6	99	56.343	ENSONIG00000019715	xrcc6	99	56.178	Oreochromis_niloticus
ENSOCUG00000006948	XRCC6	68	79.612	ENSOANG00000011328	XRCC6	99	79.612	Ornithorhynchus_anatinus
ENSOCUG00000006948	XRCC6	99	56.486	ENSORLG00020007820	xrcc6	99	56.322	Oryzias_latipes_hni
ENSOCUG00000006948	XRCC6	99	56.158	ENSORLG00015006406	xrcc6	99	56.158	Oryzias_latipes_hsok
ENSOCUG00000006948	XRCC6	99	55.049	ENSOMEG00000008998	xrcc6	99	54.886	Oryzias_melastigma
ENSOCUG00000006948	XRCC6	99	88.303	ENSOGAG00000008821	XRCC6	99	88.303	Otolemur_garnettii
ENSOCUG00000006948	XRCC6	100	76.519	ENSPPAG00000037167	XRCC6	100	76.190	Pan_paniscus
ENSOCUG00000006948	XRCC6	100	86.535	ENSPTRG00000022548	XRCC6	99	87.241	Pan_troglodytes
ENSOCUG00000006948	XRCC6	100	86.535	ENSPTRG00000045824	XRCC6	99	87.241	Pan_troglodytes
ENSOCUG00000006948	XRCC6	100	86.207	ENSPANG00000001252	XRCC6	99	86.897	Papio_anubis
ENSOCUG00000006948	XRCC6	99	60.132	ENSPKIG00000003974	xrcc6	99	60.132	Paramormyrops_kingsleyae
ENSOCUG00000006948	XRCC6	99	55.132	ENSPMGG00000014220	xrcc6	100	55.132	Periophthalmus_magnuspinnatus
ENSOCUG00000006948	XRCC6	99	86.985	ENSPEMG00000023446	Xrcc6	99	86.326	Peromyscus_maniculatus_bairdii
ENSOCUG00000006948	XRCC6	100	79.803	ENSPCIG00000026409	XRCC6	99	79.803	Phascolarctos_cinereus
ENSOCUG00000006948	XRCC6	99	57.072	ENSPFOG00000017173	xrcc6	99	56.743	Poecilia_formosa
ENSOCUG00000006948	XRCC6	99	56.743	ENSPLAG00000000562	xrcc6	99	56.414	Poecilia_latipinna
ENSOCUG00000006948	XRCC6	99	57.237	ENSPMEG00000018478	xrcc6	99	56.908	Poecilia_mexicana
ENSOCUG00000006948	XRCC6	99	57.049	ENSPREG00000020957	xrcc6	93	56.721	Poecilia_reticulata
ENSOCUG00000006948	XRCC6	100	77.504	ENSPPYG00000011876	XRCC6	100	77.176	Pongo_abelii
ENSOCUG00000006948	XRCC6	99	85.997	ENSPVAG00000001168	XRCC6	99	85.008	Pteropus_vampyrus
ENSOCUG00000006948	XRCC6	99	55.519	ENSPNYG00000003815	xrcc6	99	52.821	Pundamilia_nyererei
ENSOCUG00000006948	XRCC6	99	85.667	ENSRNOG00000006392	Xrcc6	99	85.173	Rattus_norvegicus
ENSOCUG00000006948	XRCC6	100	79.967	ENSRBIG00000039794	XRCC6	100	79.639	Rhinopithecus_bieti
ENSOCUG00000006948	XRCC6	100	86.371	ENSRROG00000030297	XRCC6	100	86.043	Rhinopithecus_roxellana
ENSOCUG00000006948	XRCC6	67	73.710	ENSSBOG00000024724	-	100	73.464	Saimiri_boliviensis_boliviensis
ENSOCUG00000006948	XRCC6	99	79.441	ENSSHAG00000010790	XRCC6	99	79.441	Sarcophilus_harrisii
ENSOCUG00000006948	XRCC6	99	60.526	ENSSFOG00015014409	xrcc6	99	60.526	Scleropages_formosus
ENSOCUG00000006948	XRCC6	99	56.507	ENSSMAG00000006496	xrcc6	99	56.507	Scophthalmus_maximus
ENSOCUG00000006948	XRCC6	99	55.483	ENSSDUG00000007542	xrcc6	99	55.483	Seriola_dumerili
ENSOCUG00000006948	XRCC6	99	54.828	ENSSLDG00000009974	xrcc6	99	54.828	Seriola_lalandi_dorsalis
ENSOCUG00000006948	XRCC6	99	73.520	ENSSPUG00000012086	XRCC6	99	73.520	Sphenodon_punctatus
ENSOCUG00000006948	XRCC6	99	55.319	ENSSPAG00000015199	xrcc6	99	55.319	Stegastes_partitus
ENSOCUG00000006948	XRCC6	96	72.041	ENSTGUG00000009852	-	94	72.617	Taeniopygia_guttata
ENSOCUG00000006948	XRCC6	99	55.025	ENSTRUG00000017070	xrcc6	99	54.860	Takifugu_rubripes
ENSOCUG00000006948	XRCC6	95	56.610	ENSTNIG00000012947	xrcc6	98	56.706	Tetraodon_nigroviridis
ENSOCUG00000006948	XRCC6	96	78.657	ENSTBEG00000011736	XRCC6	99	78.621	Tupaia_belangeri
ENSOCUG00000006948	XRCC6	99	73.311	ENSTTRG00000006749	XRCC6	99	73.311	Tursiops_truncatus
ENSOCUG00000006948	XRCC6	99	57.072	ENSXMAG00000009691	xrcc6	99	56.743	Xiphophorus_maculatus