EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000007045 (Gene tree)
Gene ID: 100350312
Gene Symbol: CLP1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 2253 bases
Position: chr1:190726150-190728402
Accession: 100350312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000006090	Clp1	PF06807.14	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000007043	CLP1-201	1278	XM_002709164	ENSOCUP00000006090	425 (aa)	XP_002709210	G1SS89

Gene Model

Click here to download ENSOCUG00000007045's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000007045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000007045	CLP1	100	99.529	ENSG00000172409	CLP1	100	99.529	Homo_sapiens
ENSOCUG00000007045	CLP1	99	75.632	ENSAPOG00000008242	clp1	99	75.632	Acanthochromis_polyacanthus
ENSOCUG00000007045	CLP1	100	99.529	ENSAMEG00000014551	CLP1	98	99.529	Ailuropoda_melanoleuca
ENSOCUG00000007045	CLP1	99	74.943	ENSACIG00000006310	clp1	98	74.943	Amphilophus_citrinellus
ENSOCUG00000007045	CLP1	100	75.520	ENSAOCG00000010681	clp1	100	75.520	Amphiprion_ocellaris
ENSOCUG00000007045	CLP1	98	76.887	ENSAPEG00000012165	clp1	99	76.887	Amphiprion_percula
ENSOCUG00000007045	CLP1	99	75.862	ENSATEG00000012374	clp1	99	75.862	Anabas_testudineus
ENSOCUG00000007045	CLP1	100	94.353	ENSACAG00000007139	CLP1	100	94.353	Anolis_carolinensis
ENSOCUG00000007045	CLP1	100	99.529	ENSANAG00000034935	CLP1	100	99.529	Aotus_nancymaae
ENSOCUG00000007045	CLP1	99	74.943	ENSACLG00000013573	clp1	99	74.943	Astatotilapia_calliptera
ENSOCUG00000007045	CLP1	97	79.097	ENSAMXG00000014194	clp1	98	79.097	Astyanax_mexicanus
ENSOCUG00000007045	CLP1	100	99.529	ENSBTAG00000006493	CLP1	100	99.529	Bos_taurus
ENSOCUG00000007045	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSOCUG00000007045	CLP1	100	99.529	ENSCJAG00000008748	CLP1	100	99.529	Callithrix_jacchus
ENSOCUG00000007045	CLP1	100	99.529	ENSCAFG00000007815	CLP1	100	99.529	Canis_familiaris
ENSOCUG00000007045	CLP1	100	99.529	ENSCAFG00020000903	CLP1	100	99.529	Canis_lupus_dingo
ENSOCUG00000007045	CLP1	100	98.824	ENSCHIG00000023497	CLP1	100	98.824	Capra_hircus
ENSOCUG00000007045	CLP1	100	99.059	ENSTSYG00000006824	CLP1	99	99.059	Carlito_syrichta
ENSOCUG00000007045	CLP1	100	98.824	ENSCAPG00000009703	CLP1	100	98.824	Cavia_aperea
ENSOCUG00000007045	CLP1	98	99.279	ENSCPOG00000012554	CLP1	99	99.279	Cavia_porcellus
ENSOCUG00000007045	CLP1	100	99.529	ENSCCAG00000031957	CLP1	100	99.529	Cebus_capucinus
ENSOCUG00000007045	CLP1	100	99.529	ENSCATG00000044628	CLP1	100	99.529	Cercocebus_atys
ENSOCUG00000007045	CLP1	100	99.294	ENSCLAG00000004094	CLP1	100	99.294	Chinchilla_lanigera
ENSOCUG00000007045	CLP1	100	99.529	ENSCSAG00000005994	CLP1	100	99.529	Chlorocebus_sabaeus
ENSOCUG00000007045	CLP1	100	93.882	ENSCPBG00000016843	CLP1	100	93.882	Chrysemys_picta_bellii
ENSOCUG00000007045	CLP1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
ENSOCUG00000007045	CLP1	99	63.033	ENSCSAVG00000003437	-	99	63.033	Ciona_savignyi
ENSOCUG00000007045	CLP1	100	99.529	ENSCANG00000034335	CLP1	100	99.529	Colobus_angolensis_palliatus
ENSOCUG00000007045	CLP1	100	99.059	ENSCGRG00001002227	CLP1	100	99.059	Cricetulus_griseus_chok1gshd
ENSOCUG00000007045	CLP1	100	99.059	ENSCGRG00000004328	CLP1	100	99.059	Cricetulus_griseus_crigri
ENSOCUG00000007045	CLP1	99	74.478	ENSCSEG00000008614	clp1	98	74.478	Cynoglossus_semilaevis
ENSOCUG00000007045	CLP1	99	75.638	ENSCVAG00000020101	clp1	98	75.638	Cyprinodon_variegatus
ENSOCUG00000007045	CLP1	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSOCUG00000007045	CLP1	99	99.528	ENSDNOG00000042415	CLP1	90	99.528	Dasypus_novemcinctus
ENSOCUG00000007045	CLP1	100	99.529	ENSDORG00000014685	Clp1	100	99.529	Dipodomys_ordii
ENSOCUG00000007045	CLP1	96	56.796	FBgn0033842	cbc	97	56.796	Drosophila_melanogaster
ENSOCUG00000007045	CLP1	100	99.294	ENSETEG00000003009	CLP1	100	99.294	Echinops_telfairi
ENSOCUG00000007045	CLP1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
ENSOCUG00000007045	CLP1	100	99.294	ENSEASG00005002093	CLP1	100	99.294	Equus_asinus_asinus
ENSOCUG00000007045	CLP1	100	99.294	ENSECAG00000011597	CLP1	100	99.294	Equus_caballus
ENSOCUG00000007045	CLP1	100	98.353	ENSEEUG00000012771	CLP1	100	98.353	Erinaceus_europaeus
ENSOCUG00000007045	CLP1	97	79.572	ENSELUG00000024048	clp1	95	79.572	Esox_lucius
ENSOCUG00000007045	CLP1	100	99.294	ENSFCAG00000006633	CLP1	100	99.294	Felis_catus
ENSOCUG00000007045	CLP1	100	92.471	ENSFALG00000011145	CLP1	100	92.471	Ficedula_albicollis
ENSOCUG00000007045	CLP1	100	99.294	ENSFDAG00000000234	CLP1	100	99.294	Fukomys_damarensis
ENSOCUG00000007045	CLP1	99	74.942	ENSFHEG00000014760	CLP1	98	74.942	Fundulus_heteroclitus
ENSOCUG00000007045	CLP1	99	78.322	ENSGMOG00000019340	clp1	98	78.322	Gadus_morhua
ENSOCUG00000007045	CLP1	100	93.176	ENSGALG00000007370	CLP1	100	93.176	Gallus_gallus
ENSOCUG00000007045	CLP1	99	75.406	ENSGAFG00000003020	clp1	99	75.406	Gambusia_affinis
ENSOCUG00000007045	CLP1	99	76.798	ENSGACG00000017832	clp1	98	76.798	Gasterosteus_aculeatus
ENSOCUG00000007045	CLP1	100	93.882	ENSGAGG00000013279	CLP1	100	93.882	Gopherus_agassizii
ENSOCUG00000007045	CLP1	100	99.529	ENSGGOG00000023006	CLP1	100	99.529	Gorilla_gorilla
ENSOCUG00000007045	CLP1	99	74.943	ENSHBUG00000010436	clp1	99	74.943	Haplochromis_burtoni
ENSOCUG00000007045	CLP1	100	99.294	ENSHGLG00000009914	CLP1	100	99.294	Heterocephalus_glaber_female
ENSOCUG00000007045	CLP1	100	99.294	ENSHGLG00100006105	CLP1	100	99.294	Heterocephalus_glaber_male
ENSOCUG00000007045	CLP1	99	77.011	ENSHCOG00000010072	clp1	99	77.011	Hippocampus_comes
ENSOCUG00000007045	CLP1	97	79.524	ENSIPUG00000016238	clp1	94	79.335	Ictalurus_punctatus
ENSOCUG00000007045	CLP1	100	99.765	ENSSTOG00000029257	CLP1	100	99.765	Ictidomys_tridecemlineatus
ENSOCUG00000007045	CLP1	100	99.059	ENSJJAG00000023691	Clp1	100	99.059	Jaculus_jaculus
ENSOCUG00000007045	CLP1	99	74.713	ENSKMAG00000011990	clp1	99	74.713	Kryptolebias_marmoratus
ENSOCUG00000007045	CLP1	99	76.092	ENSLBEG00000010201	clp1	99	76.092	Labrus_bergylta
ENSOCUG00000007045	CLP1	100	85.412	ENSLACG00000003160	CLP1	100	85.412	Latimeria_chalumnae
ENSOCUG00000007045	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSOCUG00000007045	CLP1	100	99.059	ENSLAFG00000014907	CLP1	100	99.059	Loxodonta_africana
ENSOCUG00000007045	CLP1	100	99.529	ENSMFAG00000046074	CLP1	100	99.529	Macaca_fascicularis
ENSOCUG00000007045	CLP1	100	99.529	ENSMMUG00000038007	CLP1	99	99.529	Macaca_mulatta
ENSOCUG00000007045	CLP1	100	99.529	ENSMNEG00000000259	CLP1	100	99.529	Macaca_nemestrina
ENSOCUG00000007045	CLP1	100	99.529	ENSMLEG00000043556	CLP1	100	99.529	Mandrillus_leucophaeus
ENSOCUG00000007045	CLP1	100	75.520	ENSMAMG00000002149	clp1	98	75.520	Mastacembelus_armatus
ENSOCUG00000007045	CLP1	99	74.943	ENSMZEG00005002850	clp1	99	74.943	Maylandia_zebra
ENSOCUG00000007045	CLP1	100	93.176	ENSMGAG00000009643	CLP1	100	93.176	Meleagris_gallopavo
ENSOCUG00000007045	CLP1	100	98.353	ENSMAUG00000016261	Clp1	100	98.353	Mesocricetus_auratus
ENSOCUG00000007045	CLP1	100	99.529	ENSMICG00000004895	CLP1	100	99.529	Microcebus_murinus
ENSOCUG00000007045	CLP1	100	99.294	ENSMOCG00000005498	Clp1	100	99.294	Microtus_ochrogaster
ENSOCUG00000007045	CLP1	98	78.302	ENSMMOG00000003229	clp1	96	78.302	Mola_mola
ENSOCUG00000007045	CLP1	100	97.647	ENSMODG00000020107	-	100	97.647	Monodelphis_domestica
ENSOCUG00000007045	CLP1	100	97.647	ENSMODG00000024148	-	100	97.647	Monodelphis_domestica
ENSOCUG00000007045	CLP1	99	74.943	ENSMALG00000014239	clp1	99	74.943	Monopterus_albus
ENSOCUG00000007045	CLP1	100	98.824	MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	Mus_caroli
ENSOCUG00000007045	CLP1	100	98.824	ENSMUSG00000027079	Clp1	100	98.824	Mus_musculus
ENSOCUG00000007045	CLP1	100	98.588	MGP_PahariEiJ_G0025177	Clp1	100	98.588	Mus_pahari
ENSOCUG00000007045	CLP1	100	98.824	MGP_SPRETEiJ_G0024646	Clp1	100	98.824	Mus_spretus
ENSOCUG00000007045	CLP1	100	99.529	ENSMPUG00000000268	CLP1	100	99.529	Mustela_putorius_furo
ENSOCUG00000007045	CLP1	100	99.059	ENSMLUG00000007904	CLP1	100	99.059	Myotis_lucifugus
ENSOCUG00000007045	CLP1	100	99.294	ENSNGAG00000006165	Clp1	100	99.294	Nannospalax_galili
ENSOCUG00000007045	CLP1	99	74.943	ENSNBRG00000005225	clp1	99	74.943	Neolamprologus_brichardi
ENSOCUG00000007045	CLP1	82	95.960	ENSNLEG00000012809	-	100	95.960	Nomascus_leucogenys
ENSOCUG00000007045	CLP1	100	97.647	ENSMEUG00000010949	CLP1	99	97.647	Notamacropus_eugenii
ENSOCUG00000007045	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSOCUG00000007045	CLP1	100	99.294	ENSODEG00000011410	CLP1	100	99.294	Octodon_degus
ENSOCUG00000007045	CLP1	99	74.713	ENSONIG00000005089	clp1	99	74.713	Oreochromis_niloticus
ENSOCUG00000007045	CLP1	99	74.483	ENSORLG00000003647	clp1	99	74.483	Oryzias_latipes
ENSOCUG00000007045	CLP1	99	74.253	ENSORLG00020016676	clp1	99	74.253	Oryzias_latipes_hni
ENSOCUG00000007045	CLP1	99	74.483	ENSORLG00015019484	clp1	99	74.483	Oryzias_latipes_hsok
ENSOCUG00000007045	CLP1	99	74.943	ENSOMEG00000021303	clp1	99	74.943	Oryzias_melastigma
ENSOCUG00000007045	CLP1	100	99.294	ENSOGAG00000004508	CLP1	100	99.294	Otolemur_garnettii
ENSOCUG00000007045	CLP1	100	97.882	ENSOARG00000010145	CLP1	98	97.882	Ovis_aries
ENSOCUG00000007045	CLP1	100	99.529	ENSPPAG00000041519	CLP1	100	99.529	Pan_paniscus
ENSOCUG00000007045	CLP1	100	99.294	ENSPPRG00000006135	CLP1	100	99.294	Panthera_pardus
ENSOCUG00000007045	CLP1	100	99.294	ENSPTIG00000015866	CLP1	100	99.294	Panthera_tigris_altaica
ENSOCUG00000007045	CLP1	100	99.529	ENSPTRG00000047318	CLP1	100	99.529	Pan_troglodytes
ENSOCUG00000007045	CLP1	100	99.529	ENSPANG00000017078	CLP1	97	99.529	Papio_anubis
ENSOCUG00000007045	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSOCUG00000007045	CLP1	95	91.791	ENSPSIG00000005468	CLP1	100	91.791	Pelodiscus_sinensis
ENSOCUG00000007045	CLP1	98	77.594	ENSPMGG00000012171	clp1	96	77.594	Periophthalmus_magnuspinnatus
ENSOCUG00000007045	CLP1	100	99.294	ENSPEMG00000011213	-	100	99.294	Peromyscus_maniculatus_bairdii
ENSOCUG00000007045	CLP1	100	76.056	ENSPMAG00000006707	clp1	100	76.056	Petromyzon_marinus
ENSOCUG00000007045	CLP1	100	97.176	ENSPCIG00000011899	CLP1	99	97.176	Phascolarctos_cinereus
ENSOCUG00000007045	CLP1	99	74.942	ENSPFOG00000008169	clp1	98	74.942	Poecilia_formosa
ENSOCUG00000007045	CLP1	99	74.942	ENSPLAG00000022388	clp1	99	74.942	Poecilia_latipinna
ENSOCUG00000007045	CLP1	99	74.942	ENSPMEG00000021088	clp1	99	74.942	Poecilia_mexicana
ENSOCUG00000007045	CLP1	99	75.174	ENSPREG00000017802	clp1	98	75.174	Poecilia_reticulata
ENSOCUG00000007045	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSOCUG00000007045	CLP1	100	99.529	ENSPCOG00000000360	CLP1	98	99.529	Propithecus_coquereli
ENSOCUG00000007045	CLP1	100	99.529	ENSPVAG00000016270	CLP1	100	99.529	Pteropus_vampyrus
ENSOCUG00000007045	CLP1	99	74.943	ENSPNYG00000017274	clp1	98	74.943	Pundamilia_nyererei
ENSOCUG00000007045	CLP1	97	80.238	ENSPNAG00000026460	clp1	95	80.285	Pygocentrus_nattereri
ENSOCUG00000007045	CLP1	100	98.824	ENSRNOG00000007416	Clp1	100	98.824	Rattus_norvegicus
ENSOCUG00000007045	CLP1	100	99.529	ENSRBIG00000018191	CLP1	100	99.529	Rhinopithecus_bieti
ENSOCUG00000007045	CLP1	100	99.529	ENSRROG00000039265	CLP1	100	99.529	Rhinopithecus_roxellana
ENSOCUG00000007045	CLP1	100	99.529	ENSSBOG00000032517	-	100	99.529	Saimiri_boliviensis_boliviensis
ENSOCUG00000007045	CLP1	96	79.557	ENSSBOG00000010558	-	93	79.557	Saimiri_boliviensis_boliviensis
ENSOCUG00000007045	CLP1	100	97.882	ENSSHAG00000015695	CLP1	100	97.882	Sarcophilus_harrisii
ENSOCUG00000007045	CLP1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSOCUG00000007045	CLP1	99	74.943	ENSSMAG00000019423	clp1	98	74.943	Scophthalmus_maximus
ENSOCUG00000007045	CLP1	99	76.322	ENSSDUG00000014495	clp1	99	76.322	Seriola_dumerili
ENSOCUG00000007045	CLP1	99	76.092	ENSSLDG00000000937	clp1	99	76.092	Seriola_lalandi_dorsalis
ENSOCUG00000007045	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSOCUG00000007045	CLP1	100	93.176	ENSSPUG00000016811	CLP1	100	93.176	Sphenodon_punctatus
ENSOCUG00000007045	CLP1	99	75.172	ENSSPAG00000016052	clp1	99	75.172	Stegastes_partitus
ENSOCUG00000007045	CLP1	100	99.529	ENSSSCG00000031442	CLP1	100	99.529	Sus_scrofa
ENSOCUG00000007045	CLP1	100	92.235	ENSTGUG00000007002	CLP1	100	92.235	Taeniopygia_guttata
ENSOCUG00000007045	CLP1	98	77.619	ENSTRUG00000012602	clp1	96	77.619	Takifugu_rubripes
ENSOCUG00000007045	CLP1	98	77.143	ENSTNIG00000013125	clp1	96	77.143	Tetraodon_nigroviridis
ENSOCUG00000007045	CLP1	100	98.353	ENSTBEG00000009975	CLP1	100	98.353	Tupaia_belangeri
ENSOCUG00000007045	CLP1	100	99.059	ENSTTRG00000002096	CLP1	100	99.059	Tursiops_truncatus
ENSOCUG00000007045	CLP1	100	99.529	ENSUAMG00000011388	CLP1	100	99.529	Ursus_americanus
ENSOCUG00000007045	CLP1	100	99.529	ENSUMAG00000018317	CLP1	100	99.529	Ursus_maritimus
ENSOCUG00000007045	CLP1	100	99.529	ENSVVUG00000017138	CLP1	97	99.529	Vulpes_vulpes
ENSOCUG00000007045	CLP1	98	77.698	ENSXETG00000007088	clp1	95	78.417	Xenopus_tropicalis
ENSOCUG00000007045	CLP1	99	75.174	ENSXCOG00000002287	clp1	98	75.174	Xiphophorus_couchianus
ENSOCUG00000007045	CLP1	99	75.174	ENSXMAG00000009783	clp1	98	75.174	Xiphophorus_maculatus