EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000007838 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: family with sequence similarity 177 member A1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 36702 bases
Position: chr17:54739169-54775870
Accession: 100355886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000006776	SRP54	PF00448.22	4.2e-78	1	1
ENSOCUP00000006776	SRP54_N	PF02881.19	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000007839	SRP54-201	1512	XM_008269495	ENSOCUP00000006776	503 (aa)	XP_008267717	G1STX4

Gene Model

Click here to download ENSOCUG00000007838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000007838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000007838	SRP54	100	99.405	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSOCUG00000007838	SRP54	100	95.238	ENSAPOG00000011314	srp54	100	95.238	Acanthochromis_polyacanthus
ENSOCUG00000007838	SRP54	100	99.405	ENSAMEG00000015544	SRP54	100	99.405	Ailuropoda_melanoleuca
ENSOCUG00000007838	SRP54	88	95.281	ENSACIG00000022831	srp54	96	95.281	Amphilophus_citrinellus
ENSOCUG00000007838	SRP54	100	95.238	ENSAOCG00000019401	srp54	100	95.238	Amphiprion_ocellaris
ENSOCUG00000007838	SRP54	100	95.238	ENSAPEG00000001977	srp54	100	95.238	Amphiprion_percula
ENSOCUG00000007838	SRP54	100	95.635	ENSATEG00000013877	srp54	100	95.635	Anabas_testudineus
ENSOCUG00000007838	SRP54	94	98.312	ENSAPLG00000010125	SRP54	95	98.312	Anas_platyrhynchos
ENSOCUG00000007838	SRP54	65	80.967	ENSACAG00000001124	-	100	80.967	Anolis_carolinensis
ENSOCUG00000007838	SRP54	86	94.931	ENSACAG00000010631	-	100	94.931	Anolis_carolinensis
ENSOCUG00000007838	SRP54	100	98.016	ENSACAG00000002103	-	100	98.016	Anolis_carolinensis
ENSOCUG00000007838	SRP54	100	99.405	ENSANAG00000022133	SRP54	100	99.405	Aotus_nancymaae
ENSOCUG00000007838	SRP54	100	95.437	ENSACLG00000015866	srp54	100	95.437	Astatotilapia_calliptera
ENSOCUG00000007838	SRP54	100	95.040	ENSAMXG00000032669	SRP54	100	95.040	Astyanax_mexicanus
ENSOCUG00000007838	SRP54	100	99.405	ENSBTAG00000019085	SRP54	100	99.405	Bos_taurus
ENSOCUG00000007838	SRP54	98	71.285	WBGene00009012	F21D5.7	100	71.285	Caenorhabditis_elegans
ENSOCUG00000007838	SRP54	100	99.405	ENSCJAG00000006581	SRP54	100	99.405	Callithrix_jacchus
ENSOCUG00000007838	SRP54	100	99.405	ENSCAFG00000013331	SRP54	100	99.405	Canis_familiaris
ENSOCUG00000007838	SRP54	100	99.405	ENSCAFG00020023427	SRP54	100	99.405	Canis_lupus_dingo
ENSOCUG00000007838	SRP54	100	99.405	ENSCHIG00000026345	SRP54	100	99.405	Capra_hircus
ENSOCUG00000007838	SRP54	100	99.206	ENSTSYG00000002680	-	100	99.206	Carlito_syrichta
ENSOCUG00000007838	SRP54	94	88.000	ENSTSYG00000035333	-	93	88.000	Carlito_syrichta
ENSOCUG00000007838	SRP54	94	63.673	ENSCAPG00000008780	SRP54	100	63.673	Cavia_aperea
ENSOCUG00000007838	SRP54	100	99.008	ENSCPOG00000003691	SRP54	100	99.008	Cavia_porcellus
ENSOCUG00000007838	SRP54	90	99.048	ENSCCAG00000024179	SRP54	100	99.284	Cebus_capucinus
ENSOCUG00000007838	SRP54	100	99.405	ENSCATG00000034083	SRP54	100	99.405	Cercocebus_atys
ENSOCUG00000007838	SRP54	100	99.405	ENSCLAG00000015076	SRP54	100	99.405	Chinchilla_lanigera
ENSOCUG00000007838	SRP54	100	99.405	ENSCSAG00000015575	SRP54	100	99.405	Chlorocebus_sabaeus
ENSOCUG00000007838	SRP54	95	87.318	ENSCHOG00000008986	SRP54	100	87.318	Choloepus_hoffmanni
ENSOCUG00000007838	SRP54	100	98.611	ENSCPBG00000026195	SRP54	100	98.611	Chrysemys_picta_bellii
ENSOCUG00000007838	SRP54	100	81.151	ENSCING00000007380	-	100	81.151	Ciona_intestinalis
ENSOCUG00000007838	SRP54	100	99.405	ENSCANG00000028532	SRP54	100	99.405	Colobus_angolensis_palliatus
ENSOCUG00000007838	SRP54	100	99.008	ENSCGRG00001009525	-	100	99.008	Cricetulus_griseus_chok1gshd
ENSOCUG00000007838	SRP54	77	99.481	ENSCGRG00000009453	-	89	99.481	Cricetulus_griseus_crigri
ENSOCUG00000007838	SRP54	100	94.444	ENSCSEG00000012392	srp54	100	94.444	Cynoglossus_semilaevis
ENSOCUG00000007838	SRP54	100	95.238	ENSCVAG00000010395	srp54	100	95.238	Cyprinodon_variegatus
ENSOCUG00000007838	SRP54	100	95.437	ENSDARG00000098367	srp54	100	95.437	Danio_rerio
ENSOCUG00000007838	SRP54	100	99.405	ENSDNOG00000032525	SRP54	100	99.405	Dasypus_novemcinctus
ENSOCUG00000007838	SRP54	89	84.667	ENSDORG00000005159	-	97	84.667	Dipodomys_ordii
ENSOCUG00000007838	SRP54	96	76.907	FBgn0010747	Srp54k	98	76.506	Drosophila_melanogaster
ENSOCUG00000007838	SRP54	83	58.134	ENSETEG00000012102	-	99	58.134	Echinops_telfairi
ENSOCUG00000007838	SRP54	100	98.214	ENSETEG00000016307	-	100	98.214	Echinops_telfairi
ENSOCUG00000007838	SRP54	100	86.905	ENSEBUG00000009437	-	100	86.905	Eptatretus_burgeri
ENSOCUG00000007838	SRP54	100	99.405	ENSEASG00005002057	SRP54	100	99.405	Equus_asinus_asinus
ENSOCUG00000007838	SRP54	99	99.197	ENSECAG00000018042	SRP54	98	99.197	Equus_caballus
ENSOCUG00000007838	SRP54	100	82.738	ENSEEUG00000001511	SRP54	100	82.738	Erinaceus_europaeus
ENSOCUG00000007838	SRP54	100	94.643	ENSELUG00000003395	srp54	100	94.643	Esox_lucius
ENSOCUG00000007838	SRP54	100	99.206	ENSFCAG00000032033	SRP54	100	99.206	Felis_catus
ENSOCUG00000007838	SRP54	100	98.413	ENSFALG00000005995	SRP54	100	98.413	Ficedula_albicollis
ENSOCUG00000007838	SRP54	100	99.405	ENSFDAG00000016767	SRP54	100	99.405	Fukomys_damarensis
ENSOCUG00000007838	SRP54	100	94.841	ENSFHEG00000004263	srp54	100	94.841	Fundulus_heteroclitus
ENSOCUG00000007838	SRP54	95	89.540	ENSGMOG00000011391	srp54	100	89.540	Gadus_morhua
ENSOCUG00000007838	SRP54	100	98.413	ENSGALG00000023135	SRP54	100	98.413	Gallus_gallus
ENSOCUG00000007838	SRP54	100	95.437	ENSGAFG00000011586	srp54	100	95.437	Gambusia_affinis
ENSOCUG00000007838	SRP54	100	94.841	ENSGACG00000004181	srp54	100	95.161	Gasterosteus_aculeatus
ENSOCUG00000007838	SRP54	100	98.611	ENSGAGG00000014766	SRP54	100	98.611	Gopherus_agassizii
ENSOCUG00000007838	SRP54	100	99.405	ENSGGOG00000002926	SRP54	100	99.405	Gorilla_gorilla
ENSOCUG00000007838	SRP54	100	95.437	ENSHBUG00000005678	srp54	100	95.437	Haplochromis_burtoni
ENSOCUG00000007838	SRP54	100	99.405	ENSHGLG00000002850	SRP54	100	99.405	Heterocephalus_glaber_female
ENSOCUG00000007838	SRP54	100	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSOCUG00000007838	SRP54	100	99.405	ENSHGLG00100005263	SRP54	100	99.405	Heterocephalus_glaber_male
ENSOCUG00000007838	SRP54	100	93.452	ENSHCOG00000021127	srp54	100	93.452	Hippocampus_comes
ENSOCUG00000007838	SRP54	100	94.643	ENSIPUG00000001420	srp54	100	94.643	Ictalurus_punctatus
ENSOCUG00000007838	SRP54	100	99.405	ENSSTOG00000016023	SRP54	100	99.405	Ictidomys_tridecemlineatus
ENSOCUG00000007838	SRP54	100	94.246	ENSJJAG00000013417	-	100	94.246	Jaculus_jaculus
ENSOCUG00000007838	SRP54	87	75.909	ENSJJAG00000016404	-	100	75.909	Jaculus_jaculus
ENSOCUG00000007838	SRP54	100	94.841	ENSKMAG00000007707	srp54	100	94.841	Kryptolebias_marmoratus
ENSOCUG00000007838	SRP54	100	95.238	ENSLBEG00000018690	srp54	100	95.238	Labrus_bergylta
ENSOCUG00000007838	SRP54	100	95.238	ENSLBEG00000021122	srp54	100	95.238	Labrus_bergylta
ENSOCUG00000007838	SRP54	100	95.437	ENSLACG00000017890	SRP54	100	95.437	Latimeria_chalumnae
ENSOCUG00000007838	SRP54	100	96.230	ENSLOCG00000009440	srp54	100	96.230	Lepisosteus_oculatus
ENSOCUG00000007838	SRP54	100	99.405	ENSLAFG00000012007	SRP54	100	99.405	Loxodonta_africana
ENSOCUG00000007838	SRP54	100	99.405	ENSMFAG00000044371	SRP54	100	99.405	Macaca_fascicularis
ENSOCUG00000007838	SRP54	100	99.405	ENSMMUG00000015073	FAM177A1	100	99.405	Macaca_mulatta
ENSOCUG00000007838	SRP54	100	99.405	ENSMNEG00000006947	SRP54	100	99.405	Macaca_nemestrina
ENSOCUG00000007838	SRP54	100	99.405	ENSMLEG00000042251	SRP54	100	99.405	Mandrillus_leucophaeus
ENSOCUG00000007838	SRP54	100	95.437	ENSMAMG00000004803	srp54	100	95.437	Mastacembelus_armatus
ENSOCUG00000007838	SRP54	100	95.437	ENSMZEG00005027528	srp54	100	95.437	Maylandia_zebra
ENSOCUG00000007838	SRP54	100	93.676	ENSMGAG00000012481	SRP54	100	93.676	Meleagris_gallopavo
ENSOCUG00000007838	SRP54	100	99.206	ENSMAUG00000014447	-	100	99.206	Mesocricetus_auratus
ENSOCUG00000007838	SRP54	100	99.405	ENSMICG00000010270	SRP54	100	99.405	Microcebus_murinus
ENSOCUG00000007838	SRP54	87	99.091	ENSMOCG00000000948	-	100	99.091	Microtus_ochrogaster
ENSOCUG00000007838	SRP54	89	94.183	ENSMMOG00000020303	srp54	98	94.183	Mola_mola
ENSOCUG00000007838	SRP54	100	99.206	ENSMODG00000012925	-	100	99.206	Monodelphis_domestica
ENSOCUG00000007838	SRP54	100	99.206	ENSMODG00000023150	-	100	99.206	Monodelphis_domestica
ENSOCUG00000007838	SRP54	88	95.485	ENSMALG00000009163	srp54	98	95.485	Monopterus_albus
ENSOCUG00000007838	SRP54	100	99.206	MGP_CAROLIEiJ_G0017754	-	100	99.206	Mus_caroli
ENSOCUG00000007838	SRP54	100	99.206	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSOCUG00000007838	SRP54	100	99.206	ENSMUSG00000112449	Srp54b	100	99.206	Mus_musculus
ENSOCUG00000007838	SRP54	100	98.413	ENSMUSG00000079108	Srp54c	100	98.413	Mus_musculus
ENSOCUG00000007838	SRP54	100	99.206	MGP_PahariEiJ_G0029510	-	100	99.206	Mus_pahari
ENSOCUG00000007838	SRP54	100	99.405	ENSMPUG00000016302	SRP54	100	99.405	Mustela_putorius_furo
ENSOCUG00000007838	SRP54	100	98.810	ENSMLUG00000008958	SRP54	100	98.810	Myotis_lucifugus
ENSOCUG00000007838	SRP54	100	89.286	ENSNGAG00000019806	-	100	89.286	Nannospalax_galili
ENSOCUG00000007838	SRP54	87	95.000	ENSNBRG00000006000	srp54	100	95.000	Neolamprologus_brichardi
ENSOCUG00000007838	SRP54	100	99.405	ENSNLEG00000003496	SRP54	100	99.405	Nomascus_leucogenys
ENSOCUG00000007838	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSOCUG00000007838	SRP54	57	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSOCUG00000007838	SRP54	100	99.405	ENSODEG00000004865	SRP54	100	99.405	Octodon_degus
ENSOCUG00000007838	SRP54	100	95.437	ENSONIG00000011768	srp54	100	95.437	Oreochromis_niloticus
ENSOCUG00000007838	SRP54	100	99.405	ENSOANG00000014051	SRP54	100	99.405	Ornithorhynchus_anatinus
ENSOCUG00000007838	SRP54	100	95.238	ENSORLG00000010027	srp54	100	95.238	Oryzias_latipes
ENSOCUG00000007838	SRP54	100	95.238	ENSORLG00020001878	srp54	100	95.238	Oryzias_latipes_hni
ENSOCUG00000007838	SRP54	100	95.238	ENSORLG00015021866	srp54	100	95.238	Oryzias_latipes_hsok
ENSOCUG00000007838	SRP54	100	95.040	ENSOMEG00000020952	srp54	100	95.040	Oryzias_melastigma
ENSOCUG00000007838	SRP54	100	99.405	ENSOGAG00000012188	SRP54	100	99.405	Otolemur_garnettii
ENSOCUG00000007838	SRP54	100	99.405	ENSOARG00000007160	SRP54	100	99.405	Ovis_aries
ENSOCUG00000007838	SRP54	100	99.405	ENSPPAG00000017434	SRP54	100	99.405	Pan_paniscus
ENSOCUG00000007838	SRP54	100	98.214	ENSPPRG00000014047	SRP54	100	98.214	Panthera_pardus
ENSOCUG00000007838	SRP54	100	99.206	ENSPTIG00000000744	SRP54	96	99.206	Panthera_tigris_altaica
ENSOCUG00000007838	SRP54	100	99.405	ENSPTRG00000006259	FAM177A1	100	99.405	Pan_troglodytes
ENSOCUG00000007838	SRP54	100	99.405	ENSPANG00000023853	SRP54	100	99.405	Papio_anubis
ENSOCUG00000007838	SRP54	100	95.040	ENSPKIG00000001953	srp54	100	95.040	Paramormyrops_kingsleyae
ENSOCUG00000007838	SRP54	100	98.413	ENSPSIG00000006476	SRP54	100	98.413	Pelodiscus_sinensis
ENSOCUG00000007838	SRP54	89	94.855	ENSPMGG00000004127	srp54	97	94.855	Periophthalmus_magnuspinnatus
ENSOCUG00000007838	SRP54	100	86.879	ENSPEMG00000019634	-	100	86.879	Peromyscus_maniculatus_bairdii
ENSOCUG00000007838	SRP54	100	88.095	ENSPMAG00000006078	-	100	88.095	Petromyzon_marinus
ENSOCUG00000007838	SRP54	100	99.206	ENSPCIG00000016175	SRP54	100	99.206	Phascolarctos_cinereus
ENSOCUG00000007838	SRP54	100	95.437	ENSPFOG00000008870	srp54	100	95.437	Poecilia_formosa
ENSOCUG00000007838	SRP54	100	95.437	ENSPLAG00000009889	srp54	100	95.437	Poecilia_latipinna
ENSOCUG00000007838	SRP54	100	95.437	ENSPMEG00000008601	srp54	100	95.437	Poecilia_mexicana
ENSOCUG00000007838	SRP54	100	95.437	ENSPREG00000004505	srp54	100	95.437	Poecilia_reticulata
ENSOCUG00000007838	SRP54	100	94.246	ENSPPYG00000005739	SRP54	100	94.246	Pongo_abelii
ENSOCUG00000007838	SRP54	100	95.238	ENSPCAG00000006268	SRP54	100	95.238	Procavia_capensis
ENSOCUG00000007838	SRP54	100	97.426	ENSPCOG00000022473	SRP54	100	97.426	Propithecus_coquereli
ENSOCUG00000007838	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSOCUG00000007838	SRP54	100	95.437	ENSPNYG00000009717	srp54	100	95.437	Pundamilia_nyererei
ENSOCUG00000007838	SRP54	100	95.238	ENSPNAG00000008544	srp54	100	95.238	Pygocentrus_nattereri
ENSOCUG00000007838	SRP54	100	99.008	ENSRNOG00000032776	Srp54a	100	99.008	Rattus_norvegicus
ENSOCUG00000007838	SRP54	100	99.405	ENSRROG00000041292	SRP54	100	99.405	Rhinopithecus_roxellana
ENSOCUG00000007838	SRP54	97	49.109	YPR088C	SRP54	95	48.276	Saccharomyces_cerevisiae
ENSOCUG00000007838	SRP54	94	99.367	ENSSBOG00000035145	SRP54	100	99.367	Saimiri_boliviensis_boliviensis
ENSOCUG00000007838	SRP54	68	99.125	ENSSHAG00000000671	SRP54	100	99.125	Sarcophilus_harrisii
ENSOCUG00000007838	SRP54	100	95.635	ENSSFOG00015013920	srp54	100	95.635	Scleropages_formosus
ENSOCUG00000007838	SRP54	100	89.326	ENSSMAG00000002441	srp54	100	89.326	Scophthalmus_maximus
ENSOCUG00000007838	SRP54	100	95.040	ENSSDUG00000018586	srp54	100	95.040	Seriola_dumerili
ENSOCUG00000007838	SRP54	100	94.841	ENSSLDG00000010476	srp54	100	94.841	Seriola_lalandi_dorsalis
ENSOCUG00000007838	SRP54	100	99.405	ENSSARG00000002744	SRP54	100	99.405	Sorex_araneus
ENSOCUG00000007838	SRP54	100	98.611	ENSSPUG00000013101	SRP54	100	98.611	Sphenodon_punctatus
ENSOCUG00000007838	SRP54	100	95.238	ENSSPAG00000002354	srp54	100	95.238	Stegastes_partitus
ENSOCUG00000007838	SRP54	100	99.405	ENSSSCG00000001955	SRP54	100	99.405	Sus_scrofa
ENSOCUG00000007838	SRP54	94	98.312	ENSTGUG00000011945	-	95	98.312	Taeniopygia_guttata
ENSOCUG00000007838	SRP54	100	94.444	ENSTRUG00000007057	srp54	100	94.444	Takifugu_rubripes
ENSOCUG00000007838	SRP54	100	94.048	ENSTNIG00000002589	srp54	100	94.048	Tetraodon_nigroviridis
ENSOCUG00000007838	SRP54	89	90.828	ENSTBEG00000011409	SRP54	100	90.828	Tupaia_belangeri
ENSOCUG00000007838	SRP54	100	89.286	ENSTTRG00000000928	SRP54	100	89.286	Tursiops_truncatus
ENSOCUG00000007838	SRP54	52	100.000	ENSUAMG00000012385	SRP54	100	100.000	Ursus_americanus
ENSOCUG00000007838	SRP54	100	99.405	ENSUMAG00000011234	SRP54	100	99.405	Ursus_maritimus
ENSOCUG00000007838	SRP54	94	99.156	ENSVPAG00000005668	SRP54	100	99.156	Vicugna_pacos
ENSOCUG00000007838	SRP54	100	99.405	ENSVVUG00000019962	SRP54	100	99.405	Vulpes_vulpes
ENSOCUG00000007838	SRP54	100	81.657	ENSXETG00000012290	srp54	100	81.657	Xenopus_tropicalis
ENSOCUG00000007838	SRP54	88	95.937	ENSXCOG00000004658	srp54	96	95.937	Xiphophorus_couchianus
ENSOCUG00000007838	SRP54	100	95.437	ENSXMAG00000018315	srp54	100	95.437	Xiphophorus_maculatus