EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000007970 (Gene tree)
Gene ID: 100342155
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 39737 bases
Position: chrGL018720:930813-970549
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021658	MRP-S27	PF10037.9	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000028626	PTCD2-201	4888	-	ENSOCUP00000021658	383 (aa)	-	G1TX58

Gene Model

Click here to download ENSOCUG00000007970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000007970's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000007970	PTCD2	100	78.851	ENSG00000049883	PTCD2	100	80.303	Homo_sapiens
ENSOCUG00000007970	PTCD2	93	45.634	ENSAPOG00000020682	ptcd2	93	45.634	Acanthochromis_polyacanthus
ENSOCUG00000007970	PTCD2	100	76.501	ENSAMEG00000007194	PTCD2	94	78.082	Ailuropoda_melanoleuca
ENSOCUG00000007970	PTCD2	90	42.120	ENSACIG00000002053	ptcd2	100	42.120	Amphilophus_citrinellus
ENSOCUG00000007970	PTCD2	91	45.977	ENSAOCG00000006616	ptcd2	89	45.977	Amphiprion_ocellaris
ENSOCUG00000007970	PTCD2	91	45.977	ENSAPEG00000022926	ptcd2	89	45.977	Amphiprion_percula
ENSOCUG00000007970	PTCD2	98	55.080	ENSACAG00000009747	PTCD2	91	56.742	Anolis_carolinensis
ENSOCUG00000007970	PTCD2	100	78.068	ENSANAG00000029353	PTCD2	94	79.178	Aotus_nancymaae
ENSOCUG00000007970	PTCD2	91	45.402	ENSACLG00000027742	ptcd2	89	45.402	Astatotilapia_calliptera
ENSOCUG00000007970	PTCD2	92	42.614	ENSAMXG00000029404	ptcd2	87	43.865	Astyanax_mexicanus
ENSOCUG00000007970	PTCD2	99	77.749	ENSBTAG00000014675	PTCD2	95	79.121	Bos_taurus
ENSOCUG00000007970	PTCD2	100	77.807	ENSCJAG00000016364	PTCD2	94	79.178	Callithrix_jacchus
ENSOCUG00000007970	PTCD2	99	76.440	ENSCAFG00000007982	PTCD2	86	76.438	Canis_familiaris
ENSOCUG00000007970	PTCD2	90	77.168	ENSCAFG00020019147	PTCD2	97	77.168	Canis_lupus_dingo
ENSOCUG00000007970	PTCD2	100	77.865	ENSCHIG00000017118	PTCD2	95	79.670	Capra_hircus
ENSOCUG00000007970	PTCD2	100	73.890	ENSCPOG00000040168	PTCD2	95	75.342	Cavia_porcellus
ENSOCUG00000007970	PTCD2	100	77.285	ENSCCAG00000029389	-	94	78.630	Cebus_capucinus
ENSOCUG00000007970	PTCD2	83	71.069	ENSCCAG00000021996	-	92	73.244	Cebus_capucinus
ENSOCUG00000007970	PTCD2	100	78.590	ENSCATG00000019069	PTCD2	95	80.000	Cercocebus_atys
ENSOCUG00000007970	PTCD2	100	71.802	ENSCLAG00000000072	PTCD2	93	75.140	Chinchilla_lanigera
ENSOCUG00000007970	PTCD2	100	78.851	ENSCSAG00000015623	PTCD2	95	80.274	Chlorocebus_sabaeus
ENSOCUG00000007970	PTCD2	90	57.759	ENSCHOG00000010634	PTCD2	100	57.759	Choloepus_hoffmanni
ENSOCUG00000007970	PTCD2	99	54.068	ENSCPBG00000000216	PTCD2	92	56.425	Chrysemys_picta_bellii
ENSOCUG00000007970	PTCD2	100	78.590	ENSCANG00000035636	PTCD2	94	80.220	Colobus_angolensis_palliatus
ENSOCUG00000007970	PTCD2	100	71.279	ENSCGRG00001015289	Ptcd2	80	72.329	Cricetulus_griseus_chok1gshd
ENSOCUG00000007970	PTCD2	100	71.279	ENSCGRG00000006193	Ptcd2	80	72.329	Cricetulus_griseus_crigri
ENSOCUG00000007970	PTCD2	93	43.944	ENSCVAG00000001285	ptcd2	91	43.944	Cyprinodon_variegatus
ENSOCUG00000007970	PTCD2	97	45.455	ENSDARG00000035391	ptcd2	95	45.628	Danio_rerio
ENSOCUG00000007970	PTCD2	100	74.151	ENSDNOG00000008719	PTCD2	95	75.068	Dasypus_novemcinctus
ENSOCUG00000007970	PTCD2	100	76.227	ENSDORG00000004921	Ptcd2	95	77.236	Dipodomys_ordii
ENSOCUG00000007970	PTCD2	100	68.750	ENSETEG00000016542	PTCD2	94	69.315	Echinops_telfairi
ENSOCUG00000007970	PTCD2	100	79.373	ENSEASG00005018038	PTCD2	95	80.495	Equus_asinus_asinus
ENSOCUG00000007970	PTCD2	97	80.914	ENSECAG00000007022	PTCD2	94	81.044	Equus_caballus
ENSOCUG00000007970	PTCD2	100	69.713	ENSEEUG00000014031	PTCD2	94	70.959	Erinaceus_europaeus
ENSOCUG00000007970	PTCD2	92	50.000	ENSELUG00000003584	ptcd2	92	50.000	Esox_lucius
ENSOCUG00000007970	PTCD2	100	69.713	ENSFCAG00000045432	PTCD2	78	71.233	Felis_catus
ENSOCUG00000007970	PTCD2	85	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSOCUG00000007970	PTCD2	100	73.368	ENSFDAG00000018461	PTCD2	93	76.816	Fukomys_damarensis
ENSOCUG00000007970	PTCD2	91	49.288	ENSGMOG00000003637	ptcd2	91	49.288	Gadus_morhua
ENSOCUG00000007970	PTCD2	92	48.159	ENSGALG00000038260	PTCD2	93	48.159	Gallus_gallus
ENSOCUG00000007970	PTCD2	92	59.490	ENSGAGG00000021952	PTCD2	91	59.490	Gopherus_agassizii
ENSOCUG00000007970	PTCD2	100	78.590	ENSGGOG00000010695	PTCD2	94	79.945	Gorilla_gorilla
ENSOCUG00000007970	PTCD2	91	45.402	ENSHBUG00000009191	ptcd2	89	45.402	Haplochromis_burtoni
ENSOCUG00000007970	PTCD2	100	73.890	ENSHGLG00000001234	PTCD2	93	77.247	Heterocephalus_glaber_female
ENSOCUG00000007970	PTCD2	100	73.890	ENSHGLG00100015419	PTCD2	93	77.247	Heterocephalus_glaber_male
ENSOCUG00000007970	PTCD2	98	46.133	ENSHCOG00000001703	ptcd2	90	47.851	Hippocampus_comes
ENSOCUG00000007970	PTCD2	86	44.242	ENSIPUG00000006080	ptcd2	91	44.699	Ictalurus_punctatus
ENSOCUG00000007970	PTCD2	99	76.640	ENSSTOG00000006596	PTCD2	96	77.869	Ictidomys_tridecemlineatus
ENSOCUG00000007970	PTCD2	100	74.151	ENSJJAG00000024388	Ptcd2	93	76.536	Jaculus_jaculus
ENSOCUG00000007970	PTCD2	91	40.688	ENSKMAG00000009329	ptcd2	91	40.688	Kryptolebias_marmoratus
ENSOCUG00000007970	PTCD2	100	44.792	ENSLBEG00000024871	ptcd2	88	46.821	Labrus_bergylta
ENSOCUG00000007970	PTCD2	97	52.941	ENSLOCG00000011122	ptcd2	92	54.520	Lepisosteus_oculatus
ENSOCUG00000007970	PTCD2	81	75.563	ENSLAFG00000004115	PTCD2	94	77.055	Loxodonta_africana
ENSOCUG00000007970	PTCD2	100	78.851	ENSMFAG00000031516	PTCD2	94	80.274	Macaca_fascicularis
ENSOCUG00000007970	PTCD2	100	78.590	ENSMNEG00000007537	PTCD2	95	80.274	Macaca_nemestrina
ENSOCUG00000007970	PTCD2	100	78.590	ENSMLEG00000031093	PTCD2	94	80.000	Mandrillus_leucophaeus
ENSOCUG00000007970	PTCD2	91	49.425	ENSMAMG00000018529	ptcd2	91	49.425	Mastacembelus_armatus
ENSOCUG00000007970	PTCD2	91	45.402	ENSMZEG00005003625	ptcd2	89	45.402	Maylandia_zebra
ENSOCUG00000007970	PTCD2	91	49.138	ENSMGAG00000005033	PTCD2	100	49.138	Meleagris_gallopavo
ENSOCUG00000007970	PTCD2	100	56.136	ENSMAUG00000020253	Ptcd2	95	56.164	Mesocricetus_auratus
ENSOCUG00000007970	PTCD2	100	78.068	ENSMICG00000004535	PTCD2	94	79.452	Microcebus_murinus
ENSOCUG00000007970	PTCD2	100	73.107	ENSMOCG00000019985	Ptcd2	96	73.699	Microtus_ochrogaster
ENSOCUG00000007970	PTCD2	100	57.031	ENSMODG00000001695	PTCD2	93	58.989	Monodelphis_domestica
ENSOCUG00000007970	PTCD2	91	50.000	ENSMALG00000022372	ptcd2	91	50.000	Monopterus_albus
ENSOCUG00000007970	PTCD2	100	72.846	MGP_CAROLIEiJ_G0018829	Ptcd2	96	73.699	Mus_caroli
ENSOCUG00000007970	PTCD2	100	72.324	ENSMUSG00000021650	Ptcd2	96	73.151	Mus_musculus
ENSOCUG00000007970	PTCD2	100	74.935	MGP_PahariEiJ_G0015904	Ptcd2	96	75.616	Mus_pahari
ENSOCUG00000007970	PTCD2	100	72.846	MGP_SPRETEiJ_G0019711	Ptcd2	96	73.699	Mus_spretus
ENSOCUG00000007970	PTCD2	100	78.329	ENSMPUG00000014401	PTCD2	95	80.000	Mustela_putorius_furo
ENSOCUG00000007970	PTCD2	100	75.196	ENSMLUG00000007374	PTCD2	99	75.196	Myotis_lucifugus
ENSOCUG00000007970	PTCD2	100	73.890	ENSNGAG00000005027	Ptcd2	95	74.795	Nannospalax_galili
ENSOCUG00000007970	PTCD2	86	45.152	ENSNBRG00000000092	-	100	45.152	Neolamprologus_brichardi
ENSOCUG00000007970	PTCD2	91	45.402	ENSNBRG00000008174	ptcd2	91	45.402	Neolamprologus_brichardi
ENSOCUG00000007970	PTCD2	100	77.285	ENSNLEG00000004516	PTCD2	94	78.571	Nomascus_leucogenys
ENSOCUG00000007970	PTCD2	82	51.757	ENSMEUG00000014012	-	82	51.757	Notamacropus_eugenii
ENSOCUG00000007970	PTCD2	100	79.112	ENSOPRG00000007290	PTCD2	99	79.112	Ochotona_princeps
ENSOCUG00000007970	PTCD2	100	74.935	ENSODEG00000016417	PTCD2	93	77.933	Octodon_degus
ENSOCUG00000007970	PTCD2	75	47.059	ENSONIG00000011269	ptcd2	85	47.059	Oreochromis_niloticus
ENSOCUG00000007970	PTCD2	90	46.821	ENSORLG00000003851	ptcd2	88	46.821	Oryzias_latipes
ENSOCUG00000007970	PTCD2	90	46.532	ENSORLG00020009823	ptcd2	90	46.532	Oryzias_latipes_hni
ENSOCUG00000007970	PTCD2	91	45.714	ENSORLG00015016777	ptcd2	99	45.954	Oryzias_latipes_hsok
ENSOCUG00000007970	PTCD2	90	44.798	ENSOMEG00000012396	ptcd2	84	44.798	Oryzias_melastigma
ENSOCUG00000007970	PTCD2	100	74.935	ENSOGAG00000008390	PTCD2	94	76.712	Otolemur_garnettii
ENSOCUG00000007970	PTCD2	99	77.749	ENSOARG00000005087	PTCD2	94	79.396	Ovis_aries
ENSOCUG00000007970	PTCD2	100	78.590	ENSPPAG00000028480	PTCD2	94	79.945	Pan_paniscus
ENSOCUG00000007970	PTCD2	100	78.590	ENSPTRG00000016968	PTCD2	94	79.945	Pan_troglodytes
ENSOCUG00000007970	PTCD2	90	81.159	ENSPANG00000006611	PTCD2	89	81.159	Papio_anubis
ENSOCUG00000007970	PTCD2	92	48.023	ENSPKIG00000019896	ptcd2	92	48.023	Paramormyrops_kingsleyae
ENSOCUG00000007970	PTCD2	83	60.252	ENSPSIG00000014559	PTCD2	98	60.252	Pelodiscus_sinensis
ENSOCUG00000007970	PTCD2	100	72.468	ENSPEMG00000000884	Ptcd2	96	73.025	Peromyscus_maniculatus_bairdii
ENSOCUG00000007970	PTCD2	100	57.031	ENSPCIG00000029047	PTCD2	93	58.939	Phascolarctos_cinereus
ENSOCUG00000007970	PTCD2	87	44.277	ENSPLAG00000010456	ptcd2	92	44.663	Poecilia_latipinna
ENSOCUG00000007970	PTCD2	93	43.944	ENSPREG00000021797	ptcd2	90	43.944	Poecilia_reticulata
ENSOCUG00000007970	PTCD2	100	68.668	ENSPPYG00000015543	PTCD2	93	69.505	Pongo_abelii
ENSOCUG00000007970	PTCD2	81	62.460	ENSPCAG00000006806	PTCD2	92	64.828	Procavia_capensis
ENSOCUG00000007970	PTCD2	100	74.935	ENSPVAG00000010935	PTCD2	94	76.374	Pteropus_vampyrus
ENSOCUG00000007970	PTCD2	91	45.402	ENSPNYG00000003122	ptcd2	89	45.402	Pundamilia_nyererei
ENSOCUG00000007970	PTCD2	98	46.419	ENSPNAG00000021490	ptcd2	95	47.283	Pygocentrus_nattereri
ENSOCUG00000007970	PTCD2	100	73.890	ENSRNOG00000028403	Ptcd2	96	75.342	Rattus_norvegicus
ENSOCUG00000007970	PTCD2	100	74.413	ENSRBIG00000032929	PTCD2	94	74.795	Rhinopithecus_bieti
ENSOCUG00000007970	PTCD2	100	79.112	ENSRROG00000000080	PTCD2	95	80.000	Rhinopithecus_roxellana
ENSOCUG00000007970	PTCD2	100	75.718	ENSSBOG00000018911	PTCD2	95	76.986	Saimiri_boliviensis_boliviensis
ENSOCUG00000007970	PTCD2	100	58.333	ENSSHAG00000003833	PTCD2	93	60.335	Sarcophilus_harrisii
ENSOCUG00000007970	PTCD2	93	45.531	ENSSFOG00015015415	ptcd2	92	45.531	Scleropages_formosus
ENSOCUG00000007970	PTCD2	91	45.533	ENSSMAG00000010350	ptcd2	90	45.533	Scophthalmus_maximus
ENSOCUG00000007970	PTCD2	91	48.991	ENSSDUG00000008142	ptcd2	87	48.991	Seriola_dumerili
ENSOCUG00000007970	PTCD2	91	48.991	ENSSLDG00000015284	ptcd2	91	48.991	Seriola_lalandi_dorsalis
ENSOCUG00000007970	PTCD2	81	66.667	ENSSARG00000004983	PTCD2	93	67.698	Sorex_araneus
ENSOCUG00000007970	PTCD2	100	51.436	ENSSPUG00000000176	PTCD2	90	53.090	Sphenodon_punctatus
ENSOCUG00000007970	PTCD2	91	45.115	ENSSPAG00000008591	ptcd2	89	45.115	Stegastes_partitus
ENSOCUG00000007970	PTCD2	100	78.068	ENSSSCG00000016975	PTCD2	86	79.945	Sus_scrofa
ENSOCUG00000007970	PTCD2	90	49.565	ENSTGUG00000005705	PTCD2	99	49.565	Taeniopygia_guttata
ENSOCUG00000007970	PTCD2	100	76.240	ENSTBEG00000016559	PTCD2	94	76.986	Tupaia_belangeri
ENSOCUG00000007970	PTCD2	100	76.302	ENSTTRG00000011851	PTCD2	94	78.022	Tursiops_truncatus
ENSOCUG00000007970	PTCD2	100	76.501	ENSUAMG00000007583	PTCD2	85	78.082	Ursus_americanus
ENSOCUG00000007970	PTCD2	100	76.501	ENSUMAG00000007666	PTCD2	95	78.082	Ursus_maritimus
ENSOCUG00000007970	PTCD2	100	78.125	ENSVPAG00000009597	PTCD2	94	79.121	Vicugna_pacos
ENSOCUG00000007970	PTCD2	100	76.240	ENSVVUG00000007299	-	95	76.712	Vulpes_vulpes
ENSOCUG00000007970	PTCD2	93	51.253	ENSXETG00000031652	PTCD2	94	51.253	Xenopus_tropicalis
ENSOCUG00000007970	PTCD2	85	44.923	ENSXMAG00000005940	ptcd2	82	45.272	Xiphophorus_maculatus