EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000008145 (Gene tree)
Gene ID: 100353047
Gene Symbol: -
Alias: -
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 9370 bases
Position: chr18:57946178-57955547
Accession: 100353047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000007040	SMN	PF06003.12	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000008143	-	717	XM_008270497	ENSOCUP00000007040	238 (aa)	XP_008268719	G1SUK0

Gene Model

Click here to download ENSOCUG00000008145's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000008145	-	100	75.630	ENSOCUG00000012274	-	100	77.311

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008145	-	100	98.739	ENSG00000119953	SMNDC1	100	98.739	Homo_sapiens
ENSOCUG00000008145	-	100	76.151	ENSAPOG00000021772	smndc1	100	76.151	Acanthochromis_polyacanthus
ENSOCUG00000008145	-	100	99.160	ENSAMEG00000005251	SMNDC1	100	99.160	Ailuropoda_melanoleuca
ENSOCUG00000008145	-	100	76.987	ENSACIG00000004819	smndc1	100	76.987	Amphilophus_citrinellus
ENSOCUG00000008145	-	100	76.151	ENSAOCG00000017869	smndc1	100	76.151	Amphiprion_ocellaris
ENSOCUG00000008145	-	100	76.151	ENSAPEG00000007752	smndc1	100	76.151	Amphiprion_percula
ENSOCUG00000008145	-	100	76.050	ENSATEG00000006830	smndc1	100	76.050	Anabas_testudineus
ENSOCUG00000008145	-	83	95.455	ENSAPLG00000004322	SMNDC1	100	95.455	Anas_platyrhynchos
ENSOCUG00000008145	-	100	95.378	ENSACAG00000005983	SMNDC1	100	95.378	Anolis_carolinensis
ENSOCUG00000008145	-	100	99.160	ENSANAG00000032875	SMNDC1	100	99.160	Aotus_nancymaae
ENSOCUG00000008145	-	100	76.050	ENSACLG00000016360	smndc1	100	76.050	Astatotilapia_calliptera
ENSOCUG00000008145	-	100	75.630	ENSAMXG00000020310	smndc1	100	75.630	Astyanax_mexicanus
ENSOCUG00000008145	-	100	98.739	ENSBTAG00000000551	SMNDC1	100	98.739	Bos_taurus
ENSOCUG00000008145	-	100	99.160	ENSCJAG00000018624	SMNDC1	100	99.160	Callithrix_jacchus
ENSOCUG00000008145	-	100	99.160	ENSCAFG00000010720	SMNDC1	100	99.160	Canis_familiaris
ENSOCUG00000008145	-	100	99.160	ENSCAFG00020011913	SMNDC1	100	99.160	Canis_lupus_dingo
ENSOCUG00000008145	-	100	98.739	ENSCHIG00000010604	SMNDC1	100	98.739	Capra_hircus
ENSOCUG00000008145	-	100	98.739	ENSTSYG00000026454	SMNDC1	100	98.739	Carlito_syrichta
ENSOCUG00000008145	-	100	84.167	ENSCAPG00000009132	SMNDC1	100	99.005	Cavia_aperea
ENSOCUG00000008145	-	100	99.160	ENSCPOG00000031666	SMNDC1	100	99.160	Cavia_porcellus
ENSOCUG00000008145	-	100	99.160	ENSCCAG00000021793	SMNDC1	100	99.160	Cebus_capucinus
ENSOCUG00000008145	-	100	98.739	ENSCATG00000035910	SMNDC1	100	98.739	Cercocebus_atys
ENSOCUG00000008145	-	100	98.739	ENSCLAG00000002838	SMNDC1	100	98.739	Chinchilla_lanigera
ENSOCUG00000008145	-	100	99.160	ENSCSAG00000005169	SMNDC1	100	99.160	Chlorocebus_sabaeus
ENSOCUG00000008145	-	81	98.446	ENSCHOG00000002936	SMNDC1	100	98.446	Choloepus_hoffmanni
ENSOCUG00000008145	-	100	97.059	ENSCPBG00000012837	SMNDC1	100	97.059	Chrysemys_picta_bellii
ENSOCUG00000008145	-	100	99.160	ENSCANG00000031720	-	100	99.160	Colobus_angolensis_palliatus
ENSOCUG00000008145	-	100	91.176	ENSCANG00000034620	-	100	91.176	Colobus_angolensis_palliatus
ENSOCUG00000008145	-	100	78.151	ENSCANG00000036994	-	100	78.151	Colobus_angolensis_palliatus
ENSOCUG00000008145	-	100	98.319	ENSCGRG00001012973	Smndc1	100	98.319	Cricetulus_griseus_chok1gshd
ENSOCUG00000008145	-	100	98.319	ENSCGRG00000012396	Smndc1	100	98.319	Cricetulus_griseus_crigri
ENSOCUG00000008145	-	100	75.210	ENSCSEG00000015621	smndc1	100	75.210	Cynoglossus_semilaevis
ENSOCUG00000008145	-	100	76.050	ENSCVAG00000020432	smndc1	100	76.050	Cyprinodon_variegatus
ENSOCUG00000008145	-	100	78.992	ENSDARG00000056235	smndc1	100	78.992	Danio_rerio
ENSOCUG00000008145	-	100	99.160	ENSDNOG00000016387	SMNDC1	83	99.160	Dasypus_novemcinctus
ENSOCUG00000008145	-	100	99.160	ENSDORG00000023715	Smndc1	100	99.160	Dipodomys_ordii
ENSOCUG00000008145	-	95	41.767	FBgn0039977	CG17454	98	42.972	Drosophila_melanogaster
ENSOCUG00000008145	-	100	70.954	ENSEBUG00000010929	smndc1	100	70.954	Eptatretus_burgeri
ENSOCUG00000008145	-	100	99.160	ENSEASG00005014930	SMNDC1	100	99.160	Equus_asinus_asinus
ENSOCUG00000008145	-	100	99.160	ENSECAG00000029973	SMNDC1	100	99.160	Equus_caballus
ENSOCUG00000008145	-	83	69.192	ENSEEUG00000013407	-	100	69.192	Erinaceus_europaeus
ENSOCUG00000008145	-	100	76.891	ENSELUG00000000227	smndc1	100	76.891	Esox_lucius
ENSOCUG00000008145	-	100	99.160	ENSFCAG00000027353	SMNDC1	100	99.160	Felis_catus
ENSOCUG00000008145	-	100	95.378	ENSFALG00000002306	SMNDC1	100	95.378	Ficedula_albicollis
ENSOCUG00000008145	-	100	98.739	ENSFDAG00000006468	SMNDC1	100	98.739	Fukomys_damarensis
ENSOCUG00000008145	-	100	76.050	ENSFHEG00000020150	smndc1	100	76.050	Fundulus_heteroclitus
ENSOCUG00000008145	-	100	76.471	ENSGMOG00000016585	smndc1	100	76.471	Gadus_morhua
ENSOCUG00000008145	-	100	95.378	ENSGALG00000008561	SMNDC1	100	95.378	Gallus_gallus
ENSOCUG00000008145	-	100	74.790	ENSGAFG00000011582	smndc1	100	74.790	Gambusia_affinis
ENSOCUG00000008145	-	100	75.630	ENSGACG00000009468	smndc1	100	75.630	Gasterosteus_aculeatus
ENSOCUG00000008145	-	100	97.059	ENSGAGG00000024547	SMNDC1	100	97.059	Gopherus_agassizii
ENSOCUG00000008145	-	100	99.160	ENSGGOG00000010071	SMNDC1	100	99.160	Gorilla_gorilla
ENSOCUG00000008145	-	100	76.050	ENSHBUG00000017596	smndc1	100	76.050	Haplochromis_burtoni
ENSOCUG00000008145	-	100	98.739	ENSHGLG00000013390	-	100	98.739	Heterocephalus_glaber_female
ENSOCUG00000008145	-	100	68.443	ENSHGLG00000001157	-	100	65.306	Heterocephalus_glaber_female
ENSOCUG00000008145	-	100	76.639	ENSHGLG00100004278	-	100	76.230	Heterocephalus_glaber_male
ENSOCUG00000008145	-	100	98.739	ENSHGLG00100004814	-	100	98.739	Heterocephalus_glaber_male
ENSOCUG00000008145	-	100	74.895	ENSHCOG00000000783	smndc1	100	74.895	Hippocampus_comes
ENSOCUG00000008145	-	100	76.471	ENSIPUG00000004217	smndc1	100	76.471	Ictalurus_punctatus
ENSOCUG00000008145	-	100	98.739	ENSSTOG00000006088	SMNDC1	100	98.739	Ictidomys_tridecemlineatus
ENSOCUG00000008145	-	100	99.160	ENSJJAG00000019974	Smndc1	100	99.160	Jaculus_jaculus
ENSOCUG00000008145	-	100	75.210	ENSKMAG00000020134	smndc1	100	75.210	Kryptolebias_marmoratus
ENSOCUG00000008145	-	100	74.790	ENSLBEG00000004598	smndc1	100	74.790	Labrus_bergylta
ENSOCUG00000008145	-	100	84.034	ENSLACG00000007784	SMNDC1	100	84.034	Latimeria_chalumnae
ENSOCUG00000008145	-	100	84.034	ENSLOCG00000012355	smndc1	100	84.034	Lepisosteus_oculatus
ENSOCUG00000008145	-	100	98.739	ENSLAFG00000014353	SMNDC1	100	98.739	Loxodonta_africana
ENSOCUG00000008145	-	100	81.513	ENSMFAG00000038381	-	100	81.513	Macaca_fascicularis
ENSOCUG00000008145	-	100	99.160	ENSMFAG00000002433	-	100	99.160	Macaca_fascicularis
ENSOCUG00000008145	-	100	81.513	ENSMMUG00000045875	-	100	81.513	Macaca_mulatta
ENSOCUG00000008145	-	100	99.160	ENSMMUG00000007775	SMNDC1	100	99.160	Macaca_mulatta
ENSOCUG00000008145	-	100	87.395	ENSMNEG00000033853	-	100	87.395	Macaca_nemestrina
ENSOCUG00000008145	-	100	99.160	ENSMNEG00000042963	-	100	99.160	Macaca_nemestrina
ENSOCUG00000008145	-	100	92.887	ENSMLEG00000040236	SMNDC1	100	92.469	Mandrillus_leucophaeus
ENSOCUG00000008145	-	89	73.239	ENSMAMG00000018233	smndc1	87	73.239	Mastacembelus_armatus
ENSOCUG00000008145	-	100	76.050	ENSMZEG00005027510	smndc1	100	76.050	Maylandia_zebra
ENSOCUG00000008145	-	84	95.000	ENSMGAG00000010777	SMNDC1	84	95.000	Meleagris_gallopavo
ENSOCUG00000008145	-	100	99.160	ENSMAUG00000012243	-	100	99.160	Mesocricetus_auratus
ENSOCUG00000008145	-	99	80.169	ENSMAUG00000005459	-	93	80.169	Mesocricetus_auratus
ENSOCUG00000008145	-	100	99.160	ENSMICG00000027336	-	100	99.160	Microcebus_murinus
ENSOCUG00000008145	-	100	86.134	ENSMICG00000031640	-	100	86.134	Microcebus_murinus
ENSOCUG00000008145	-	100	98.739	ENSMOCG00000002458	Smndc1	100	98.739	Microtus_ochrogaster
ENSOCUG00000008145	-	100	76.050	ENSMMOG00000008856	smndc1	100	76.050	Mola_mola
ENSOCUG00000008145	-	100	98.319	ENSMODG00000010542	SMNDC1	100	98.319	Monodelphis_domestica
ENSOCUG00000008145	-	100	76.050	ENSMALG00000017598	smndc1	100	76.050	Monopterus_albus
ENSOCUG00000008145	-	100	98.739	MGP_CAROLIEiJ_G0023072	Smndc1	100	98.739	Mus_caroli
ENSOCUG00000008145	-	100	98.319	ENSMUSG00000025024	Smndc1	100	98.319	Mus_musculus
ENSOCUG00000008145	-	100	97.899	MGP_PahariEiJ_G0014560	Smndc1	100	97.899	Mus_pahari
ENSOCUG00000008145	-	100	98.319	MGP_SPRETEiJ_G0023993	Smndc1	100	98.319	Mus_spretus
ENSOCUG00000008145	-	100	99.160	ENSMPUG00000002089	SMNDC1	100	99.160	Mustela_putorius_furo
ENSOCUG00000008145	-	100	97.899	ENSMLUG00000016007	SMNDC1	100	97.899	Myotis_lucifugus
ENSOCUG00000008145	-	100	98.319	ENSNGAG00000006833	Smndc1	100	98.319	Nannospalax_galili
ENSOCUG00000008145	-	100	75.630	ENSNBRG00000017089	smndc1	100	75.630	Neolamprologus_brichardi
ENSOCUG00000008145	-	100	99.160	ENSNLEG00000015471	SMNDC1	100	99.160	Nomascus_leucogenys
ENSOCUG00000008145	-	82	57.500	ENSMEUG00000010120	-	99	58.000	Notamacropus_eugenii
ENSOCUG00000008145	-	100	99.160	ENSOPRG00000015348	SMNDC1	100	99.160	Ochotona_princeps
ENSOCUG00000008145	-	100	68.487	ENSODEG00000007594	-	100	65.546	Octodon_degus
ENSOCUG00000008145	-	100	75.630	ENSONIG00000000434	smndc1	100	75.630	Oreochromis_niloticus
ENSOCUG00000008145	-	100	97.899	ENSOANG00000001598	SMNDC1	100	97.899	Ornithorhynchus_anatinus
ENSOCUG00000008145	-	100	76.050	ENSORLG00000005934	smndc1	95	76.050	Oryzias_latipes
ENSOCUG00000008145	-	100	76.050	ENSORLG00020008796	smndc1	95	76.050	Oryzias_latipes_hni
ENSOCUG00000008145	-	100	76.050	ENSORLG00015013666	smndc1	100	76.050	Oryzias_latipes_hsok
ENSOCUG00000008145	-	100	77.731	ENSOMEG00000007590	smndc1	100	77.731	Oryzias_melastigma
ENSOCUG00000008145	-	100	98.739	ENSOGAG00000000571	SMNDC1	100	98.739	Otolemur_garnettii
ENSOCUG00000008145	-	100	98.739	ENSOARG00000009500	SMNDC1	100	98.739	Ovis_aries
ENSOCUG00000008145	-	100	99.160	ENSPPAG00000027815	SMNDC1	100	99.160	Pan_paniscus
ENSOCUG00000008145	-	100	99.160	ENSPPRG00000013749	SMNDC1	100	99.160	Panthera_pardus
ENSOCUG00000008145	-	100	99.160	ENSPTIG00000011451	SMNDC1	100	99.160	Panthera_tigris_altaica
ENSOCUG00000008145	-	100	99.160	ENSPTRG00000002937	SMNDC1	100	99.160	Pan_troglodytes
ENSOCUG00000008145	-	100	99.160	ENSPANG00000020805	-	100	99.160	Papio_anubis
ENSOCUG00000008145	-	100	93.277	ENSPANG00000031346	-	100	93.277	Papio_anubis
ENSOCUG00000008145	-	100	80.672	ENSPKIG00000017164	smndc1	100	80.672	Paramormyrops_kingsleyae
ENSOCUG00000008145	-	100	96.639	ENSPSIG00000012257	SMNDC1	100	96.639	Pelodiscus_sinensis
ENSOCUG00000008145	-	100	73.529	ENSPMGG00000015651	smndc1	100	73.529	Periophthalmus_magnuspinnatus
ENSOCUG00000008145	-	100	99.160	ENSPEMG00000022058	Smndc1	100	99.160	Peromyscus_maniculatus_bairdii
ENSOCUG00000008145	-	100	67.623	ENSPMAG00000007705	smndc1	100	67.623	Petromyzon_marinus
ENSOCUG00000008145	-	97	63.043	ENSPCIG00000009693	-	100	63.043	Phascolarctos_cinereus
ENSOCUG00000008145	-	100	98.319	ENSPCIG00000018419	SMNDC1	100	98.319	Phascolarctos_cinereus
ENSOCUG00000008145	-	100	75.210	ENSPFOG00000017113	smndc1	100	75.210	Poecilia_formosa
ENSOCUG00000008145	-	100	75.630	ENSPLAG00000010372	smndc1	100	75.630	Poecilia_latipinna
ENSOCUG00000008145	-	100	75.630	ENSPMEG00000012288	smndc1	100	75.630	Poecilia_mexicana
ENSOCUG00000008145	-	100	74.790	ENSPREG00000012279	smndc1	100	74.790	Poecilia_reticulata
ENSOCUG00000008145	-	100	99.160	ENSPPYG00000002643	SMNDC1	100	99.160	Pongo_abelii
ENSOCUG00000008145	-	81	97.409	ENSPCAG00000016183	SMNDC1	100	97.409	Procavia_capensis
ENSOCUG00000008145	-	100	98.739	ENSPCOG00000024343	SMNDC1	100	98.739	Propithecus_coquereli
ENSOCUG00000008145	-	100	76.050	ENSPVAG00000004368	SMNDC1	100	76.050	Pteropus_vampyrus
ENSOCUG00000008145	-	92	69.778	ENSPNYG00000024093	smndc1	86	75.758	Pundamilia_nyererei
ENSOCUG00000008145	-	100	75.630	ENSPNAG00000025285	smndc1	100	75.630	Pygocentrus_nattereri
ENSOCUG00000008145	-	100	98.739	ENSRNOG00000014833	Smndc1	100	98.739	Rattus_norvegicus
ENSOCUG00000008145	-	100	98.739	ENSRBIG00000000224	-	100	98.739	Rhinopithecus_bieti
ENSOCUG00000008145	-	100	82.773	ENSRBIG00000032452	-	100	82.773	Rhinopithecus_bieti
ENSOCUG00000008145	-	100	83.193	ENSRROG00000039125	-	100	83.193	Rhinopithecus_roxellana
ENSOCUG00000008145	-	100	99.160	ENSRROG00000044992	-	100	99.160	Rhinopithecus_roxellana
ENSOCUG00000008145	-	100	99.160	ENSSBOG00000026789	SMNDC1	100	99.160	Saimiri_boliviensis_boliviensis
ENSOCUG00000008145	-	100	98.319	ENSSHAG00000015189	SMNDC1	100	98.319	Sarcophilus_harrisii
ENSOCUG00000008145	-	100	79.832	ENSSFOG00015008311	smndc1	100	79.832	Scleropages_formosus
ENSOCUG00000008145	-	100	75.630	ENSSMAG00000020118	smndc1	100	75.630	Scophthalmus_maximus
ENSOCUG00000008145	-	100	76.471	ENSSDUG00000015330	smndc1	100	76.471	Seriola_dumerili
ENSOCUG00000008145	-	100	76.471	ENSSLDG00000017325	smndc1	100	76.471	Seriola_lalandi_dorsalis
ENSOCUG00000008145	-	100	98.739	ENSSARG00000006063	SMNDC1	100	98.739	Sorex_araneus
ENSOCUG00000008145	-	100	95.378	ENSSPUG00000004574	SMNDC1	100	95.378	Sphenodon_punctatus
ENSOCUG00000008145	-	100	75.732	ENSSPAG00000000338	smndc1	100	75.732	Stegastes_partitus
ENSOCUG00000008145	-	100	98.739	ENSSSCG00000030507	SMNDC1	100	98.739	Sus_scrofa
ENSOCUG00000008145	-	100	95.378	ENSTGUG00000010599	SMNDC1	100	95.378	Taeniopygia_guttata
ENSOCUG00000008145	-	100	73.950	ENSTRUG00000023281	smndc1	100	73.950	Takifugu_rubripes
ENSOCUG00000008145	-	100	75.210	ENSTNIG00000013331	smndc1	100	75.210	Tetraodon_nigroviridis
ENSOCUG00000008145	-	100	99.580	ENSTBEG00000014337	SMNDC1	100	99.580	Tupaia_belangeri
ENSOCUG00000008145	-	100	99.160	ENSUAMG00000008142	SMNDC1	100	99.160	Ursus_americanus
ENSOCUG00000008145	-	100	99.160	ENSUMAG00000023722	SMNDC1	100	99.160	Ursus_maritimus
ENSOCUG00000008145	-	83	98.485	ENSVPAG00000003402	SMNDC1	100	98.485	Vicugna_pacos
ENSOCUG00000008145	-	100	99.160	ENSVVUG00000007820	SMNDC1	100	99.160	Vulpes_vulpes
ENSOCUG00000008145	-	60	80.986	ENSXETG00000015415	SMNDC1	100	80.986	Xenopus_tropicalis
ENSOCUG00000008145	-	100	74.790	ENSXCOG00000009159	smndc1	100	74.790	Xiphophorus_couchianus
ENSOCUG00000008145	-	100	74.370	ENSXMAG00000012755	smndc1	100	74.370	Xiphophorus_maculatus