EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000008161 (Gene tree)
Gene ID: 100347543
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 80695 bases
Position: chr1:49372970-49453664
Accession: 100347543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000007055	RTC	PF01137.21	8.4e-61	1	1
ENSOCUP00000007055	RTC_insert	PF05189.13	7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000008161	RCL1-201	1333	XM_002708109	ENSOCUP00000007055	373 (aa)	XP_002708155	G1SUL4

Gene Model

Click here to download ENSOCUG00000008161's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008161	RCL1	100	98.391	ENSG00000120158	RCL1	100	98.605	Homo_sapiens
ENSOCUG00000008161	RCL1	100	78.610	ENSAPOG00000015666	rcl1	100	78.610	Acanthochromis_polyacanthus
ENSOCUG00000008161	RCL1	100	97.051	ENSAMEG00000002631	RCL1	100	97.051	Ailuropoda_melanoleuca
ENSOCUG00000008161	RCL1	99	78.919	ENSACIG00000021195	rcl1	99	78.919	Amphilophus_citrinellus
ENSOCUG00000008161	RCL1	100	77.807	ENSAOCG00000002223	rcl1	100	77.807	Amphiprion_ocellaris
ENSOCUG00000008161	RCL1	100	78.075	ENSAPEG00000006905	rcl1	100	78.075	Amphiprion_percula
ENSOCUG00000008161	RCL1	99	75.946	ENSATEG00000020026	rcl1	99	75.946	Anabas_testudineus
ENSOCUG00000008161	RCL1	88	87.500	ENSAPLG00000006031	RCL1	100	87.500	Anas_platyrhynchos
ENSOCUG00000008161	RCL1	100	85.255	ENSACAG00000003640	RCL1	100	85.255	Anolis_carolinensis
ENSOCUG00000008161	RCL1	100	97.587	ENSANAG00000037372	RCL1	100	97.587	Aotus_nancymaae
ENSOCUG00000008161	RCL1	99	78.378	ENSACLG00000021724	rcl1	99	78.378	Astatotilapia_calliptera
ENSOCUG00000008161	RCL1	98	77.989	ENSAMXG00000033394	rcl1	99	77.989	Astyanax_mexicanus
ENSOCUG00000008161	RCL1	99	46.809	WBGene00022852	ZK1127.5	99	46.809	Caenorhabditis_elegans
ENSOCUG00000008161	RCL1	100	98.123	ENSCJAG00000011202	RCL1	100	98.123	Callithrix_jacchus
ENSOCUG00000008161	RCL1	100	95.710	ENSCAFG00000002091	RCL1	100	95.710	Canis_familiaris
ENSOCUG00000008161	RCL1	100	95.710	ENSCAFG00020000638	RCL1	78	95.710	Canis_lupus_dingo
ENSOCUG00000008161	RCL1	100	95.710	ENSCHIG00000012407	RCL1	100	95.710	Capra_hircus
ENSOCUG00000008161	RCL1	88	97.248	ENSTSYG00000009592	RCL1	97	96.685	Carlito_syrichta
ENSOCUG00000008161	RCL1	68	79.769	ENSCAPG00000013575	RCL1	100	79.769	Cavia_aperea
ENSOCUG00000008161	RCL1	100	96.515	ENSCPOG00000015354	RCL1	100	96.515	Cavia_porcellus
ENSOCUG00000008161	RCL1	100	98.123	ENSCCAG00000033505	RCL1	100	98.123	Cebus_capucinus
ENSOCUG00000008161	RCL1	100	97.587	ENSCATG00000034721	RCL1	100	97.587	Cercocebus_atys
ENSOCUG00000008161	RCL1	100	96.247	ENSCLAG00000007445	RCL1	100	96.247	Chinchilla_lanigera
ENSOCUG00000008161	RCL1	100	98.123	ENSCSAG00000008811	RCL1	100	98.123	Chlorocebus_sabaeus
ENSOCUG00000008161	RCL1	87	81.115	ENSCHOG00000007216	RCL1	100	81.115	Choloepus_hoffmanni
ENSOCUG00000008161	RCL1	100	89.276	ENSCPBG00000025481	RCL1	94	89.362	Chrysemys_picta_bellii
ENSOCUG00000008161	RCL1	98	59.459	ENSCING00000019565	-	98	59.459	Ciona_intestinalis
ENSOCUG00000008161	RCL1	100	98.123	ENSCANG00000027099	RCL1	100	98.123	Colobus_angolensis_palliatus
ENSOCUG00000008161	RCL1	100	96.247	ENSCGRG00001013748	Rcl1	100	96.247	Cricetulus_griseus_chok1gshd
ENSOCUG00000008161	RCL1	88	96.341	ENSCGRG00000005843	Rcl1	99	96.341	Cricetulus_griseus_crigri
ENSOCUG00000008161	RCL1	99	78.919	ENSCSEG00000000712	rcl1	97	78.919	Cynoglossus_semilaevis
ENSOCUG00000008161	RCL1	99	80.000	ENSCVAG00000011536	rcl1	99	80.000	Cyprinodon_variegatus
ENSOCUG00000008161	RCL1	98	76.022	ENSDARG00000038312	rcl1	100	76.022	Danio_rerio
ENSOCUG00000008161	RCL1	71	95.849	ENSDNOG00000019911	RCL1	100	95.849	Dasypus_novemcinctus
ENSOCUG00000008161	RCL1	100	95.710	ENSDORG00000015645	Rcl1	100	95.710	Dipodomys_ordii
ENSOCUG00000008161	RCL1	99	53.968	FBgn0020909	Rtc1	98	53.968	Drosophila_melanogaster
ENSOCUG00000008161	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSOCUG00000008161	RCL1	100	53.600	ENSEBUG00000016621	-	100	53.600	Eptatretus_burgeri
ENSOCUG00000008161	RCL1	100	96.515	ENSEASG00005010653	RCL1	100	96.515	Equus_asinus_asinus
ENSOCUG00000008161	RCL1	100	96.515	ENSECAG00000015973	RCL1	100	96.515	Equus_caballus
ENSOCUG00000008161	RCL1	100	81.233	ENSEEUG00000009801	RCL1	100	81.233	Erinaceus_europaeus
ENSOCUG00000008161	RCL1	100	75.668	ENSELUG00000007353	rcl1	100	75.668	Esox_lucius
ENSOCUG00000008161	RCL1	100	95.710	ENSFCAG00000014557	RCL1	100	95.710	Felis_catus
ENSOCUG00000008161	RCL1	95	83.099	ENSFALG00000010553	RCL1	94	83.099	Ficedula_albicollis
ENSOCUG00000008161	RCL1	88	95.413	ENSFDAG00000004209	RCL1	100	95.413	Fukomys_damarensis
ENSOCUG00000008161	RCL1	99	79.730	ENSFHEG00000011228	rcl1	99	79.730	Fundulus_heteroclitus
ENSOCUG00000008161	RCL1	99	77.568	ENSGMOG00000004677	rcl1	99	77.838	Gadus_morhua
ENSOCUG00000008161	RCL1	99	86.179	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
ENSOCUG00000008161	RCL1	99	77.838	ENSGAFG00000007257	rcl1	99	77.838	Gambusia_affinis
ENSOCUG00000008161	RCL1	100	77.005	ENSGACG00000017474	rcl1	100	77.005	Gasterosteus_aculeatus
ENSOCUG00000008161	RCL1	100	89.812	ENSGAGG00000003689	RCL1	100	89.812	Gopherus_agassizii
ENSOCUG00000008161	RCL1	100	97.855	ENSGGOG00000015041	RCL1	100	97.855	Gorilla_gorilla
ENSOCUG00000008161	RCL1	99	78.649	ENSHBUG00000001393	rcl1	99	78.649	Haplochromis_burtoni
ENSOCUG00000008161	RCL1	100	96.247	ENSHGLG00000016452	RCL1	100	96.247	Heterocephalus_glaber_female
ENSOCUG00000008161	RCL1	100	80.697	ENSHGLG00000005368	-	100	80.161	Heterocephalus_glaber_female
ENSOCUG00000008161	RCL1	100	89.276	ENSHGLG00100008718	-	100	89.276	Heterocephalus_glaber_male
ENSOCUG00000008161	RCL1	100	81.769	ENSHGLG00100018010	-	100	81.233	Heterocephalus_glaber_male
ENSOCUG00000008161	RCL1	99	78.108	ENSHCOG00000020170	rcl1	99	78.108	Hippocampus_comes
ENSOCUG00000008161	RCL1	98	78.804	ENSIPUG00000018054	RCL1	99	78.804	Ictalurus_punctatus
ENSOCUG00000008161	RCL1	100	97.319	ENSSTOG00000000023	RCL1	100	97.319	Ictidomys_tridecemlineatus
ENSOCUG00000008161	RCL1	54	72.139	ENSJJAG00000000764	-	95	72.165	Jaculus_jaculus
ENSOCUG00000008161	RCL1	100	95.442	ENSJJAG00000022803	-	100	95.442	Jaculus_jaculus
ENSOCUG00000008161	RCL1	100	84.450	ENSJJAG00000015632	-	100	84.450	Jaculus_jaculus
ENSOCUG00000008161	RCL1	98	78.202	ENSKMAG00000011946	rcl1	99	78.202	Kryptolebias_marmoratus
ENSOCUG00000008161	RCL1	99	75.676	ENSLBEG00000003957	rcl1	99	75.676	Labrus_bergylta
ENSOCUG00000008161	RCL1	91	81.711	ENSLACG00000004594	RCL1	98	85.804	Latimeria_chalumnae
ENSOCUG00000008161	RCL1	100	81.501	ENSLOCG00000010148	rcl1	98	81.501	Lepisosteus_oculatus
ENSOCUG00000008161	RCL1	100	93.029	ENSLAFG00000017495	RCL1	100	93.029	Loxodonta_africana
ENSOCUG00000008161	RCL1	100	98.123	ENSMFAG00000037906	RCL1	100	98.123	Macaca_fascicularis
ENSOCUG00000008161	RCL1	100	98.123	ENSMNEG00000012288	RCL1	100	98.123	Macaca_nemestrina
ENSOCUG00000008161	RCL1	100	98.123	ENSMLEG00000043088	RCL1	100	98.123	Mandrillus_leucophaeus
ENSOCUG00000008161	RCL1	99	78.649	ENSMAMG00000008311	rcl1	99	78.649	Mastacembelus_armatus
ENSOCUG00000008161	RCL1	99	78.378	ENSMZEG00005017292	rcl1	99	78.378	Maylandia_zebra
ENSOCUG00000008161	RCL1	58	84.475	ENSMGAG00000002245	RCL1	97	84.434	Meleagris_gallopavo
ENSOCUG00000008161	RCL1	58	96.744	ENSMAUG00000008922	Rcl1	100	96.744	Mesocricetus_auratus
ENSOCUG00000008161	RCL1	100	95.710	ENSMICG00000015562	RCL1	100	95.710	Microcebus_murinus
ENSOCUG00000008161	RCL1	100	96.783	ENSMOCG00000012145	Rcl1	100	96.783	Microtus_ochrogaster
ENSOCUG00000008161	RCL1	99	75.472	ENSMMOG00000021264	rcl1	99	75.472	Mola_mola
ENSOCUG00000008161	RCL1	95	93.239	ENSMODG00000015377	RCL1	94	93.239	Monodelphis_domestica
ENSOCUG00000008161	RCL1	99	77.297	ENSMALG00000018618	rcl1	99	77.297	Monopterus_albus
ENSOCUG00000008161	RCL1	100	96.515	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.515	Mus_caroli
ENSOCUG00000008161	RCL1	100	96.515	ENSMUSG00000024785	Rcl1	100	96.515	Mus_musculus
ENSOCUG00000008161	RCL1	100	96.515	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSOCUG00000008161	RCL1	100	95.710	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSOCUG00000008161	RCL1	100	95.979	ENSMPUG00000004998	RCL1	100	95.979	Mustela_putorius_furo
ENSOCUG00000008161	RCL1	100	96.247	ENSMLUG00000009654	RCL1	100	96.247	Myotis_lucifugus
ENSOCUG00000008161	RCL1	100	96.515	ENSNGAG00000015327	Rcl1	100	96.515	Nannospalax_galili
ENSOCUG00000008161	RCL1	90	77.448	ENSNBRG00000019854	rcl1	96	74.022	Neolamprologus_brichardi
ENSOCUG00000008161	RCL1	100	95.174	ENSNLEG00000008891	RCL1	100	95.174	Nomascus_leucogenys
ENSOCUG00000008161	RCL1	100	86.327	ENSMEUG00000007653	RCL1	100	86.327	Notamacropus_eugenii
ENSOCUG00000008161	RCL1	100	97.319	ENSOPRG00000010965	RCL1	100	97.319	Ochotona_princeps
ENSOCUG00000008161	RCL1	88	79.217	ENSODEG00000004151	RCL1	96	80.183	Octodon_degus
ENSOCUG00000008161	RCL1	99	78.378	ENSONIG00000003871	rcl1	99	78.378	Oreochromis_niloticus
ENSOCUG00000008161	RCL1	67	87.352	ENSOANG00000013193	-	100	87.352	Ornithorhynchus_anatinus
ENSOCUG00000008161	RCL1	100	76.203	ENSORLG00000010443	rcl1	100	76.203	Oryzias_latipes
ENSOCUG00000008161	RCL1	100	76.203	ENSORLG00020012211	rcl1	100	76.203	Oryzias_latipes_hni
ENSOCUG00000008161	RCL1	100	75.936	ENSORLG00015001122	rcl1	100	75.936	Oryzias_latipes_hsok
ENSOCUG00000008161	RCL1	100	77.807	ENSOMEG00000022976	rcl1	88	77.807	Oryzias_melastigma
ENSOCUG00000008161	RCL1	100	94.638	ENSOGAG00000007480	RCL1	100	94.638	Otolemur_garnettii
ENSOCUG00000008161	RCL1	100	95.979	ENSOARG00000013463	RCL1	100	95.979	Ovis_aries
ENSOCUG00000008161	RCL1	100	98.123	ENSPPAG00000037958	RCL1	100	98.123	Pan_paniscus
ENSOCUG00000008161	RCL1	100	94.906	ENSPPRG00000022645	RCL1	100	94.906	Panthera_pardus
ENSOCUG00000008161	RCL1	87	95.706	ENSPTIG00000019031	RCL1	97	95.673	Panthera_tigris_altaica
ENSOCUG00000008161	RCL1	100	97.855	ENSPTRG00000020743	RCL1	100	97.855	Pan_troglodytes
ENSOCUG00000008161	RCL1	100	98.123	ENSPANG00000025151	RCL1	100	98.123	Papio_anubis
ENSOCUG00000008161	RCL1	100	78.075	ENSPKIG00000021022	rcl1	100	78.075	Paramormyrops_kingsleyae
ENSOCUG00000008161	RCL1	88	89.634	ENSPSIG00000012302	RCL1	100	89.634	Pelodiscus_sinensis
ENSOCUG00000008161	RCL1	100	76.471	ENSPMGG00000024007	rcl1	100	76.471	Periophthalmus_magnuspinnatus
ENSOCUG00000008161	RCL1	100	96.783	ENSPEMG00000023275	Rcl1	100	96.783	Peromyscus_maniculatus_bairdii
ENSOCUG00000008161	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSOCUG00000008161	RCL1	100	93.298	ENSPCIG00000000188	RCL1	100	93.298	Phascolarctos_cinereus
ENSOCUG00000008161	RCL1	99	78.649	ENSPFOG00000019682	rcl1	99	78.649	Poecilia_formosa
ENSOCUG00000008161	RCL1	99	78.649	ENSPLAG00000022354	rcl1	99	78.649	Poecilia_latipinna
ENSOCUG00000008161	RCL1	99	78.649	ENSPMEG00000008131	rcl1	99	78.649	Poecilia_mexicana
ENSOCUG00000008161	RCL1	99	78.378	ENSPREG00000008032	rcl1	99	78.378	Poecilia_reticulata
ENSOCUG00000008161	RCL1	100	98.123	ENSPPYG00000019244	RCL1	100	98.123	Pongo_abelii
ENSOCUG00000008161	RCL1	100	85.523	ENSPCAG00000001440	RCL1	100	85.523	Procavia_capensis
ENSOCUG00000008161	RCL1	100	97.319	ENSPCOG00000009611	RCL1	100	97.319	Propithecus_coquereli
ENSOCUG00000008161	RCL1	100	97.051	ENSPVAG00000015752	RCL1	100	97.051	Pteropus_vampyrus
ENSOCUG00000008161	RCL1	99	78.378	ENSPNYG00000012910	rcl1	99	78.378	Pundamilia_nyererei
ENSOCUG00000008161	RCL1	99	78.552	ENSPNAG00000028307	rcl1	92	78.552	Pygocentrus_nattereri
ENSOCUG00000008161	RCL1	100	96.247	ENSRNOG00000015491	Rcl1	100	96.247	Rattus_norvegicus
ENSOCUG00000008161	RCL1	100	97.855	ENSRBIG00000035818	RCL1	100	97.855	Rhinopithecus_bieti
ENSOCUG00000008161	RCL1	100	98.123	ENSRROG00000029781	RCL1	100	98.123	Rhinopithecus_roxellana
ENSOCUG00000008161	RCL1	98	36.486	YOL010W	-	97	36.436	Saccharomyces_cerevisiae
ENSOCUG00000008161	RCL1	100	97.855	ENSSBOG00000026369	RCL1	100	97.855	Saimiri_boliviensis_boliviensis
ENSOCUG00000008161	RCL1	88	92.121	ENSSHAG00000014086	RCL1	100	92.121	Sarcophilus_harrisii
ENSOCUG00000008161	RCL1	100	78.075	ENSSFOG00015023020	rcl1	100	78.075	Scleropages_formosus
ENSOCUG00000008161	RCL1	99	79.189	ENSSMAG00000019751	rcl1	85	79.189	Scophthalmus_maximus
ENSOCUG00000008161	RCL1	100	77.540	ENSSDUG00000006349	rcl1	100	77.540	Seriola_dumerili
ENSOCUG00000008161	RCL1	100	77.807	ENSSLDG00000022076	rcl1	100	77.807	Seriola_lalandi_dorsalis
ENSOCUG00000008161	RCL1	100	95.710	ENSSARG00000009260	RCL1	100	95.710	Sorex_araneus
ENSOCUG00000008161	RCL1	100	88.204	ENSSPUG00000016330	RCL1	100	88.204	Sphenodon_punctatus
ENSOCUG00000008161	RCL1	100	79.679	ENSSPAG00000018038	rcl1	100	79.679	Stegastes_partitus
ENSOCUG00000008161	RCL1	100	97.051	ENSSSCG00000005217	RCL1	83	97.051	Sus_scrofa
ENSOCUG00000008161	RCL1	100	85.067	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
ENSOCUG00000008161	RCL1	99	78.108	ENSTRUG00000010493	rcl1	99	78.108	Takifugu_rubripes
ENSOCUG00000008161	RCL1	99	76.757	ENSTNIG00000013214	rcl1	99	76.757	Tetraodon_nigroviridis
ENSOCUG00000008161	RCL1	100	89.276	ENSTBEG00000016339	RCL1	100	89.276	Tupaia_belangeri
ENSOCUG00000008161	RCL1	100	95.979	ENSTTRG00000016525	RCL1	100	95.979	Tursiops_truncatus
ENSOCUG00000008161	RCL1	100	97.051	ENSUAMG00000005598	RCL1	100	97.051	Ursus_americanus
ENSOCUG00000008161	RCL1	88	96.330	ENSUMAG00000017890	RCL1	97	96.330	Ursus_maritimus
ENSOCUG00000008161	RCL1	88	97.554	ENSVPAG00000009188	RCL1	100	97.554	Vicugna_pacos
ENSOCUG00000008161	RCL1	88	96.037	ENSVVUG00000007304	RCL1	89	96.037	Vulpes_vulpes
ENSOCUG00000008161	RCL1	100	75.936	ENSXETG00000000592	rcl1	100	75.936	Xenopus_tropicalis
ENSOCUG00000008161	RCL1	59	30.000	ENSXCOG00000008002	rtca	63	30.000	Xiphophorus_couchianus
ENSOCUG00000008161	RCL1	99	78.649	ENSXCOG00000004922	rcl1	99	78.649	Xiphophorus_couchianus
ENSOCUG00000008161	RCL1	99	78.649	ENSXMAG00000022366	RCL1	99	78.649	Xiphophorus_maculatus