EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000008241 (Gene tree)
Gene ID: 100353081
Gene Symbol: PRDM12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 13116 bases
Position: chrGL019556:5446-18561
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000007120	zf-C2H2	PF00096.26	3.5e-13	1	2
ENSOCUP00000007120	zf-C2H2	PF00096.26	3.5e-13	2	2
ENSOCUP00000024416	zf-C2H2	PF00096.26	5.1e-13	1	2
ENSOCUP00000024416	zf-C2H2	PF00096.26	5.1e-13	2	2
ENSOCUP00000024416	zf-met	PF12874.7	1.9e-07	1	1
ENSOCUP00000007120	zf-met	PF12874.7	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000023088	PRDM12-201	1029	-	ENSOCUP00000024416	343 (aa)	-	G1U4U1
ENSOCUT00000008238	PRDM12-202	933	-	ENSOCUP00000007120	311 (aa)	-	G1SUR9

Gene Model

Click here to download ENSOCUG00000008241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000008241	PRDM12	88	46.053	ENSOCUG00000013454	PRDM5	94	46.053
ENSOCUG00000008241	PRDM12	50	40.789	ENSOCUG00000027634	-	71	40.789
ENSOCUG00000008241	PRDM12	71	34.524	ENSOCUG00000004131	ZBTB14	50	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008241	PRDM12	98	94.426	ENSG00000130711	PRDM12	85	93.291	Homo_sapiens
ENSOCUG00000008241	PRDM12	96	79.688	ENSAPOG00000016051	prdm12b	88	76.696	Acanthochromis_polyacanthus
ENSOCUG00000008241	PRDM12	96	66.890	ENSAPOG00000018234	-	85	66.026	Acanthochromis_polyacanthus
ENSOCUG00000008241	PRDM12	96	90.970	ENSAMEG00000016234	PRDM12	92	90.970	Ailuropoda_melanoleuca
ENSOCUG00000008241	PRDM12	99	79.027	ENSACIG00000005193	-	87	79.027	Amphilophus_citrinellus
ENSOCUG00000008241	PRDM12	96	80.317	ENSACIG00000019578	prdm12b	89	77.246	Amphilophus_citrinellus
ENSOCUG00000008241	PRDM12	96	81.329	ENSAOCG00000015040	prdm12b	88	78.209	Amphiprion_ocellaris
ENSOCUG00000008241	PRDM12	96	82.109	ENSAPEG00000015092	prdm12b	88	78.916	Amphiprion_percula
ENSOCUG00000008241	PRDM12	96	77.994	ENSAPEG00000022849	-	80	78.317	Amphiprion_percula
ENSOCUG00000008241	PRDM12	100	80.635	ENSATEG00000014595	-	91	80.635	Anabas_testudineus
ENSOCUG00000008241	PRDM12	100	92.971	ENSANAG00000020616	PRDM12	92	92.971	Aotus_nancymaae
ENSOCUG00000008241	PRDM12	96	82.450	ENSACLG00000011876	prdm12b	83	82.450	Astatotilapia_calliptera
ENSOCUG00000008241	PRDM12	96	81.073	ENSACLG00000007631	-	81	80.757	Astatotilapia_calliptera
ENSOCUG00000008241	PRDM12	97	82.178	ENSAMXG00000008540	PRDM12	84	82.178	Astyanax_mexicanus
ENSOCUG00000008241	PRDM12	98	85.531	ENSAMXG00000033665	prdm12b	84	85.852	Astyanax_mexicanus
ENSOCUG00000008241	PRDM12	98	94.426	ENSBTAG00000023797	PRDM12	87	93.291	Bos_taurus
ENSOCUG00000008241	PRDM12	98	94.098	ENSCJAG00000020540	PRDM12	87	92.971	Callithrix_jacchus
ENSOCUG00000008241	PRDM12	91	95.789	ENSCAFG00000023076	PRDM12	91	94.539	Canis_familiaris
ENSOCUG00000008241	PRDM12	98	94.754	ENSCAFG00020024046	PRDM12	86	93.610	Canis_lupus_dingo
ENSOCUG00000008241	PRDM12	98	94.754	ENSCHIG00000025005	PRDM12	86	93.610	Capra_hircus
ENSOCUG00000008241	PRDM12	93	94.138	ENSCPOG00000005901	PRDM12	88	94.138	Cavia_porcellus
ENSOCUG00000008241	PRDM12	98	94.098	ENSCCAG00000037485	PRDM12	86	92.971	Cebus_capucinus
ENSOCUG00000008241	PRDM12	98	94.098	ENSCATG00000020327	PRDM12	86	92.971	Cercocebus_atys
ENSOCUG00000008241	PRDM12	99	91.961	ENSCLAG00000005499	PRDM12	85	91.961	Chinchilla_lanigera
ENSOCUG00000008241	PRDM12	98	94.098	ENSCSAG00000014756	PRDM12	86	92.971	Chlorocebus_sabaeus
ENSOCUG00000008241	PRDM12	100	88.498	ENSCPBG00000022628	PRDM12	88	88.498	Chrysemys_picta_bellii
ENSOCUG00000008241	PRDM12	98	93.770	ENSCGRG00001015005	Prdm12	86	92.652	Cricetulus_griseus_chok1gshd
ENSOCUG00000008241	PRDM12	96	82.848	ENSCVAG00000017166	prdm12b	83	82.848	Cyprinodon_variegatus
ENSOCUG00000008241	PRDM12	96	78.816	ENSCVAG00000000944	-	83	78.816	Cyprinodon_variegatus
ENSOCUG00000008241	PRDM12	99	83.489	ENSDARG00000007430	prdm12b	88	83.489	Danio_rerio
ENSOCUG00000008241	PRDM12	98	93.811	ENSDNOG00000042302	PRDM12	87	92.698	Dasypus_novemcinctus
ENSOCUG00000008241	PRDM12	97	62.952	ENSEBUG00000016780	prdm12b	52	86.364	Eptatretus_burgeri
ENSOCUG00000008241	PRDM12	100	93.930	ENSEASG00005008472	PRDM12	86	93.930	Equus_asinus_asinus
ENSOCUG00000008241	PRDM12	100	94.249	ENSECAG00000005933	PRDM12	86	94.249	Equus_caballus
ENSOCUG00000008241	PRDM12	98	83.013	ENSELUG00000009905	prdm12b	85	83.013	Esox_lucius
ENSOCUG00000008241	PRDM12	96	82.274	ENSELUG00000013674	PRDM12	82	82.274	Esox_lucius
ENSOCUG00000008241	PRDM12	98	94.754	ENSFCAG00000043086	PRDM12	86	93.610	Felis_catus
ENSOCUG00000008241	PRDM12	100	88.498	ENSFALG00000001445	PRDM12	79	88.498	Ficedula_albicollis
ENSOCUG00000008241	PRDM12	96	81.731	ENSFHEG00000003944	prdm12b	83	81.731	Fundulus_heteroclitus
ENSOCUG00000008241	PRDM12	96	80.906	ENSFHEG00000007746	-	80	80.906	Fundulus_heteroclitus
ENSOCUG00000008241	PRDM12	96	84.211	ENSGMOG00000011797	prdm12b	85	83.667	Gadus_morhua
ENSOCUG00000008241	PRDM12	100	88.498	ENSGALG00000003895	PRDM12	88	88.498	Gallus_gallus
ENSOCUG00000008241	PRDM12	96	83.660	ENSGAFG00000010827	prdm12b	82	83.660	Gambusia_affinis
ENSOCUG00000008241	PRDM12	96	83.713	ENSGACG00000016713	prdm12b	83	83.713	Gasterosteus_aculeatus
ENSOCUG00000008241	PRDM12	100	88.498	ENSGAGG00000014083	PRDM12	88	88.498	Gopherus_agassizii
ENSOCUG00000008241	PRDM12	98	94.098	ENSGGOG00000010568	PRDM12	86	92.971	Gorilla_gorilla
ENSOCUG00000008241	PRDM12	96	81.073	ENSHBUG00000022537	-	75	80.757	Haplochromis_burtoni
ENSOCUG00000008241	PRDM12	96	80.511	ENSHBUG00000022878	prdm12b	84	80.511	Haplochromis_burtoni
ENSOCUG00000008241	PRDM12	99	91.961	ENSHGLG00000013939	PRDM12	86	92.013	Heterocephalus_glaber_female
ENSOCUG00000008241	PRDM12	96	80.063	ENSHCOG00000003663	prdm12b	81	80.063	Hippocampus_comes
ENSOCUG00000008241	PRDM12	96	78.477	ENSHCOG00000021167	-	84	78.477	Hippocampus_comes
ENSOCUG00000008241	PRDM12	97	85.484	ENSIPUG00000017053	prdm12b	84	85.484	Ictalurus_punctatus
ENSOCUG00000008241	PRDM12	100	79.874	ENSIPUG00000019544	PRDM12	87	79.874	Ictalurus_punctatus
ENSOCUG00000008241	PRDM12	100	92.971	ENSSTOG00000005986	PRDM12	82	92.971	Ictidomys_tridecemlineatus
ENSOCUG00000008241	PRDM12	98	93.791	ENSJJAG00000005424	Prdm12	92	93.770	Jaculus_jaculus
ENSOCUG00000008241	PRDM12	96	82.838	ENSKMAG00000021205	-	85	82.838	Kryptolebias_marmoratus
ENSOCUG00000008241	PRDM12	96	77.439	ENSKMAG00000016921	prdm12b	81	77.744	Kryptolebias_marmoratus
ENSOCUG00000008241	PRDM12	96	83.117	ENSLBEG00000017769	prdm12b	82	83.442	Labrus_bergylta
ENSOCUG00000008241	PRDM12	96	80.968	ENSLBEG00000007776	-	82	81.290	Labrus_bergylta
ENSOCUG00000008241	PRDM12	100	86.901	ENSLACG00000017560	PRDM12	88	86.901	Latimeria_chalumnae
ENSOCUG00000008241	PRDM12	96	86.379	ENSLOCG00000005429	prdm12b	87	83.333	Lepisosteus_oculatus
ENSOCUG00000008241	PRDM12	98	92.926	ENSLAFG00000006979	PRDM12	86	91.850	Loxodonta_africana
ENSOCUG00000008241	PRDM12	98	94.098	ENSMFAG00000040322	PRDM12	85	92.971	Macaca_fascicularis
ENSOCUG00000008241	PRDM12	98	94.098	ENSMNEG00000037234	PRDM12	86	92.971	Macaca_nemestrina
ENSOCUG00000008241	PRDM12	96	80.968	ENSMAMG00000018988	-	80	80.968	Mastacembelus_armatus
ENSOCUG00000008241	PRDM12	96	82.637	ENSMAMG00000013212	prdm12b	88	79.394	Mastacembelus_armatus
ENSOCUG00000008241	PRDM12	96	81.073	ENSMZEG00005000415	PRDM12	80	80.757	Maylandia_zebra
ENSOCUG00000008241	PRDM12	100	88.498	ENSMGAG00000005438	PRDM12	88	88.498	Meleagris_gallopavo
ENSOCUG00000008241	PRDM12	100	92.332	ENSMAUG00000013040	Prdm12	86	92.332	Mesocricetus_auratus
ENSOCUG00000008241	PRDM12	100	93.610	ENSMICG00000015480	PRDM12	86	93.610	Microcebus_murinus
ENSOCUG00000008241	PRDM12	100	92.332	ENSMOCG00000021026	Prdm12	86	92.332	Microtus_ochrogaster
ENSOCUG00000008241	PRDM12	100	90.415	ENSMODG00000012108	PRDM12	88	90.415	Monodelphis_domestica
ENSOCUG00000008241	PRDM12	85	81.985	ENSMALG00000021901	prdm12b	79	86.525	Monopterus_albus
ENSOCUG00000008241	PRDM12	98	94.098	MGP_CAROLIEiJ_G0023414	Prdm12	86	92.971	Mus_caroli
ENSOCUG00000008241	PRDM12	98	94.098	ENSMUSG00000079466	Prdm12	86	92.971	Mus_musculus
ENSOCUG00000008241	PRDM12	98	94.098	MGP_PahariEiJ_G0024871	Prdm12	86	92.971	Mus_pahari
ENSOCUG00000008241	PRDM12	98	94.098	MGP_SPRETEiJ_G0024331	Prdm12	86	92.971	Mus_spretus
ENSOCUG00000008241	PRDM12	97	93.750	ENSNGAG00000018480	Prdm12	89	91.987	Nannospalax_galili
ENSOCUG00000008241	PRDM12	96	76.774	ENSNBRG00000024312	-	86	76.452	Neolamprologus_brichardi
ENSOCUG00000008241	PRDM12	96	79.747	ENSNBRG00000006727	prdm12b	89	76.418	Neolamprologus_brichardi
ENSOCUG00000008241	PRDM12	100	78.594	ENSMEUG00000003828	PRDM12	88	78.594	Notamacropus_eugenii
ENSOCUG00000008241	PRDM12	98	94.098	ENSOPRG00000008680	PRDM12	92	94.098	Ochotona_princeps
ENSOCUG00000008241	PRDM12	100	92.332	ENSODEG00000016282	PRDM12	59	92.332	Octodon_degus
ENSOCUG00000008241	PRDM12	64	92.965	ENSOANG00000001043	PRDM12	92	92.965	Ornithorhynchus_anatinus
ENSOCUG00000008241	PRDM12	96	80.380	ENSORLG00000017558	-	81	80.696	Oryzias_latipes
ENSOCUG00000008241	PRDM12	100	78.419	ENSORLG00000007114	prdm12b	85	78.419	Oryzias_latipes
ENSOCUG00000008241	PRDM12	100	78.116	ENSORLG00020019565	prdm12b	83	80.380	Oryzias_latipes_hni
ENSOCUG00000008241	PRDM12	96	80.126	ENSORLG00020013167	-	81	80.442	Oryzias_latipes_hni
ENSOCUG00000008241	PRDM12	100	78.116	ENSORLG00015007621	prdm12b	83	80.380	Oryzias_latipes_hsok
ENSOCUG00000008241	PRDM12	96	80.380	ENSORLG00015003435	-	81	80.380	Oryzias_latipes_hsok
ENSOCUG00000008241	PRDM12	100	77.711	ENSOMEG00000004134	prdm12b	83	79.937	Oryzias_melastigma
ENSOCUG00000008241	PRDM12	96	79.193	ENSOMEG00000007762	-	87	79.503	Oryzias_melastigma
ENSOCUG00000008241	PRDM12	98	94.754	ENSOGAG00000007557	PRDM12	92	94.754	Otolemur_garnettii
ENSOCUG00000008241	PRDM12	86	92.593	ENSPPAG00000031506	-	92	92.593	Pan_paniscus
ENSOCUG00000008241	PRDM12	100	84.076	ENSPPRG00000023024	PRDM12	80	84.076	Panthera_pardus
ENSOCUG00000008241	PRDM12	98	94.426	ENSPTRG00000043324	-	86	93.291	Pan_troglodytes
ENSOCUG00000008241	PRDM12	98	94.426	ENSPTRG00000021475	PRDM12	86	93.291	Pan_troglodytes
ENSOCUG00000008241	PRDM12	98	94.098	ENSPANG00000025967	PRDM12	86	92.971	Papio_anubis
ENSOCUG00000008241	PRDM12	96	79.221	ENSPKIG00000004305	PRDM12	87	79.221	Paramormyrops_kingsleyae
ENSOCUG00000008241	PRDM12	96	85.161	ENSPKIG00000007228	prdm12b	83	85.161	Paramormyrops_kingsleyae
ENSOCUG00000008241	PRDM12	100	87.859	ENSPSIG00000006739	PRDM12	88	87.859	Pelodiscus_sinensis
ENSOCUG00000008241	PRDM12	96	83.766	ENSPMGG00000008867	prdm12b	83	84.091	Periophthalmus_magnuspinnatus
ENSOCUG00000008241	PRDM12	96	82.724	ENSPMGG00000002356	-	78	82.392	Periophthalmus_magnuspinnatus
ENSOCUG00000008241	PRDM12	98	93.770	ENSPEMG00000009969	Prdm12	84	93.770	Peromyscus_maniculatus_bairdii
ENSOCUG00000008241	PRDM12	100	90.735	ENSPCIG00000024119	PRDM12	88	90.735	Phascolarctos_cinereus
ENSOCUG00000008241	PRDM12	96	82.637	ENSPFOG00000019841	prdm12b	84	82.637	Poecilia_formosa
ENSOCUG00000008241	PRDM12	96	83.660	ENSPLAG00000016626	prdm12b	81	83.660	Poecilia_latipinna
ENSOCUG00000008241	PRDM12	96	83.660	ENSPMEG00000016698	prdm12b	83	83.660	Poecilia_mexicana
ENSOCUG00000008241	PRDM12	96	83.495	ENSPREG00000015073	prdm12b	81	83.495	Poecilia_reticulata
ENSOCUG00000008241	PRDM12	95	77.636	ENSPREG00000003211	-	86	77.636	Poecilia_reticulata
ENSOCUG00000008241	PRDM12	98	93.791	ENSPPYG00000019694	PRDM12	87	93.791	Pongo_abelii
ENSOCUG00000008241	PRDM12	98	94.754	ENSPCOG00000022255	PRDM12	86	93.610	Propithecus_coquereli
ENSOCUG00000008241	PRDM12	98	94.754	ENSPVAG00000001511	PRDM12	86	93.610	Pteropus_vampyrus
ENSOCUG00000008241	PRDM12	96	81.073	ENSPNYG00000013589	-	80	80.757	Pundamilia_nyererei
ENSOCUG00000008241	PRDM12	96	80.000	ENSPNYG00000009607	prdm12b	84	80.000	Pundamilia_nyererei
ENSOCUG00000008241	PRDM12	97	86.129	ENSPNAG00000024532	prdm12b	84	86.129	Pygocentrus_nattereri
ENSOCUG00000008241	PRDM12	96	81.639	ENSPNAG00000013396	PRDM12	86	79.245	Pygocentrus_nattereri
ENSOCUG00000008241	PRDM12	98	94.098	ENSRNOG00000009218	Prdm12	86	92.971	Rattus_norvegicus
ENSOCUG00000008241	PRDM12	94	95.578	ENSRBIG00000042712	PRDM12	81	95.578	Rhinopithecus_bieti
ENSOCUG00000008241	PRDM12	95	95.623	ENSRROG00000043554	PRDM12	93	95.623	Rhinopithecus_roxellana
ENSOCUG00000008241	PRDM12	100	89.809	ENSSHAG00000015972	PRDM12	88	89.809	Sarcophilus_harrisii
ENSOCUG00000008241	PRDM12	96	78.882	ENSSMAG00000003754	prdm12b	88	76.246	Scophthalmus_maximus
ENSOCUG00000008241	PRDM12	97	83.062	ENSSDUG00000019071	-	85	83.062	Seriola_dumerili
ENSOCUG00000008241	PRDM12	96	80.374	ENSSDUG00000023498	prdm12b	83	80.374	Seriola_dumerili
ENSOCUG00000008241	PRDM12	96	80.818	ENSSLDG00000009557	prdm12b	83	81.132	Seriola_lalandi_dorsalis
ENSOCUG00000008241	PRDM12	96	84.615	ENSSLDG00000013562	-	86	84.615	Seriola_lalandi_dorsalis
ENSOCUG00000008241	PRDM12	100	88.498	ENSSPUG00000013424	PRDM12	88	88.498	Sphenodon_punctatus
ENSOCUG00000008241	PRDM12	96	81.073	ENSSPAG00000018824	prdm12b	88	77.976	Stegastes_partitus
ENSOCUG00000008241	PRDM12	96	72.436	ENSSPAG00000022420	-	79	74.832	Stegastes_partitus
ENSOCUG00000008241	PRDM12	98	94.754	ENSSSCG00000005703	PRDM12	86	93.610	Sus_scrofa
ENSOCUG00000008241	PRDM12	96	81.046	ENSTRUG00000013239	-	86	81.373	Takifugu_rubripes
ENSOCUG00000008241	PRDM12	96	83.388	ENSTRUG00000018659	prdm12b	88	80.061	Takifugu_rubripes
ENSOCUG00000008241	PRDM12	96	80.528	ENSTNIG00000005859	-	85	80.528	Tetraodon_nigroviridis
ENSOCUG00000008241	PRDM12	96	83.713	ENSTNIG00000009020	prdm12b	83	83.713	Tetraodon_nigroviridis
ENSOCUG00000008241	PRDM12	98	94.754	ENSUAMG00000009653	PRDM12	87	93.610	Ursus_americanus
ENSOCUG00000008241	PRDM12	98	94.754	ENSVVUG00000027662	PRDM12	73	94.754	Vulpes_vulpes
ENSOCUG00000008241	PRDM12	96	83.333	ENSXCOG00000002836	prdm12b	82	83.333	Xiphophorus_couchianus
ENSOCUG00000008241	PRDM12	96	80.968	ENSXMAG00000028012	-	81	80.968	Xiphophorus_maculatus
ENSOCUG00000008241	PRDM12	96	82.524	ENSXMAG00000005537	prdm12b	82	82.524	Xiphophorus_maculatus