EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000008270 (Gene tree)
Gene ID: 100346526
Gene Symbol: RTCB
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 28326 bases
Position: chr4:88698721-88727046
Accession: 100346526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000007152	RtcB	PF01139.17	8.4e-132	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000008271	RTCB-201	5815	XM_002711419	ENSOCUP00000007152	490 (aa)	XP_002711465	G1SUU7

Gene Model

Click here to download ENSOCUG00000008270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008270	RTCB	96	99.574	ENSG00000100220	RTCB	93	99.574	Homo_sapiens
ENSOCUG00000008270	RTCB	96	94.255	ENSAPOG00000006040	rtcb	93	94.255	Acanthochromis_polyacanthus
ENSOCUG00000008270	RTCB	96	99.362	ENSAMEG00000016152	RTCB	93	99.362	Ailuropoda_melanoleuca
ENSOCUG00000008270	RTCB	96	89.362	ENSACIG00000009083	rtcb	93	89.362	Amphilophus_citrinellus
ENSOCUG00000008270	RTCB	96	94.468	ENSAOCG00000005662	rtcb	93	94.468	Amphiprion_ocellaris
ENSOCUG00000008270	RTCB	96	94.468	ENSAPEG00000024701	rtcb	93	94.468	Amphiprion_percula
ENSOCUG00000008270	RTCB	92	93.157	ENSAPEG00000024653	rtcb	96	93.157	Amphiprion_percula
ENSOCUG00000008270	RTCB	96	94.043	ENSATEG00000000618	rtcb	93	94.043	Anabas_testudineus
ENSOCUG00000008270	RTCB	96	93.388	ENSACAG00000014817	RTCB	93	93.388	Anolis_carolinensis
ENSOCUG00000008270	RTCB	96	82.979	ENSANAG00000018191	-	85	82.979	Aotus_nancymaae
ENSOCUG00000008270	RTCB	67	84.848	ENSANAG00000023724	-	75	84.848	Aotus_nancymaae
ENSOCUG00000008270	RTCB	96	92.766	ENSACLG00000008367	rtcb	93	92.766	Astatotilapia_calliptera
ENSOCUG00000008270	RTCB	96	94.255	ENSAMXG00000042320	rtcb	93	94.255	Astyanax_mexicanus
ENSOCUG00000008270	RTCB	96	99.149	ENSBTAG00000011070	RTCB	93	99.149	Bos_taurus
ENSOCUG00000008270	RTCB	96	72.128	WBGene00008877	rtcb-1	93	72.128	Caenorhabditis_elegans
ENSOCUG00000008270	RTCB	96	99.574	ENSCJAG00000006128	RTCB	93	99.574	Callithrix_jacchus
ENSOCUG00000008270	RTCB	96	99.362	ENSCAFG00000001785	RTCB	93	99.362	Canis_familiaris
ENSOCUG00000008270	RTCB	96	95.106	ENSCAFG00000010789	-	93	95.106	Canis_familiaris
ENSOCUG00000008270	RTCB	90	95.682	ENSCAFG00020018953	-	99	95.682	Canis_lupus_dingo
ENSOCUG00000008270	RTCB	96	99.362	ENSCAFG00020004890	-	93	99.362	Canis_lupus_dingo
ENSOCUG00000008270	RTCB	96	99.362	ENSCHIG00000027009	-	93	99.362	Capra_hircus
ENSOCUG00000008270	RTCB	96	98.723	ENSTSYG00000012320	RTCB	93	98.723	Carlito_syrichta
ENSOCUG00000008270	RTCB	90	98.643	ENSCAPG00000011647	RTCB	89	98.643	Cavia_aperea
ENSOCUG00000008270	RTCB	96	99.574	ENSCCAG00000000618	RTCB	93	99.574	Cebus_capucinus
ENSOCUG00000008270	RTCB	96	99.149	ENSCATG00000033424	RTCB	93	99.149	Cercocebus_atys
ENSOCUG00000008270	RTCB	96	99.149	ENSCLAG00000007997	RTCB	93	99.149	Chinchilla_lanigera
ENSOCUG00000008270	RTCB	96	98.936	ENSCSAG00000008351	RTCB	93	98.936	Chlorocebus_sabaeus
ENSOCUG00000008270	RTCB	96	83.830	ENSCHOG00000009123	RTCB	93	83.830	Choloepus_hoffmanni
ENSOCUG00000008270	RTCB	96	96.383	ENSCPBG00000023184	RTCB	93	96.383	Chrysemys_picta_bellii
ENSOCUG00000008270	RTCB	96	81.489	ENSCING00000003830	-	93	81.489	Ciona_intestinalis
ENSOCUG00000008270	RTCB	96	81.702	ENSCSAVG00000008124	-	92	81.702	Ciona_savignyi
ENSOCUG00000008270	RTCB	96	98.941	ENSCANG00000001891	RTCB	97	98.941	Colobus_angolensis_palliatus
ENSOCUG00000008270	RTCB	96	99.362	ENSCGRG00001011173	Rtcb	93	99.362	Cricetulus_griseus_chok1gshd
ENSOCUG00000008270	RTCB	89	99.541	ENSCGRG00000009587	-	89	99.541	Cricetulus_griseus_crigri
ENSOCUG00000008270	RTCB	96	93.404	ENSCSEG00000003986	rtcb	93	93.404	Cynoglossus_semilaevis
ENSOCUG00000008270	RTCB	83	95.567	ENSCVAG00000000569	rtcb	92	95.567	Cyprinodon_variegatus
ENSOCUG00000008270	RTCB	96	93.617	ENSDARG00000101047	rtcb	93	93.617	Danio_rerio
ENSOCUG00000008270	RTCB	83	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSOCUG00000008270	RTCB	96	98.511	ENSDORG00000010855	Rtcb	93	98.511	Dipodomys_ordii
ENSOCUG00000008270	RTCB	96	85.684	FBgn0032781	RtcB	92	85.684	Drosophila_melanogaster
ENSOCUG00000008270	RTCB	96	92.128	ENSETEG00000001988	RTCB	93	92.128	Echinops_telfairi
ENSOCUG00000008270	RTCB	96	85.106	ENSEBUG00000014235	rtcb	93	85.106	Eptatretus_burgeri
ENSOCUG00000008270	RTCB	96	99.362	ENSEASG00005019059	RTCB	93	99.362	Equus_asinus_asinus
ENSOCUG00000008270	RTCB	96	99.362	ENSECAG00000023998	RTCB	93	99.362	Equus_caballus
ENSOCUG00000008270	RTCB	76	98.925	ENSEEUG00000006251	RTCB	83	98.925	Erinaceus_europaeus
ENSOCUG00000008270	RTCB	96	81.781	ENSELUG00000009275	rtcb	93	81.781	Esox_lucius
ENSOCUG00000008270	RTCB	96	99.574	ENSFCAG00000026480	RTCB	93	99.574	Felis_catus
ENSOCUG00000008270	RTCB	96	97.660	ENSFALG00000013334	RTCB	93	97.660	Ficedula_albicollis
ENSOCUG00000008270	RTCB	96	99.362	ENSFDAG00000018150	RTCB	93	99.362	Fukomys_damarensis
ENSOCUG00000008270	RTCB	96	94.043	ENSFHEG00000009595	rtcb	93	94.043	Fundulus_heteroclitus
ENSOCUG00000008270	RTCB	99	89.072	ENSGMOG00000018882	rtcb	96	89.072	Gadus_morhua
ENSOCUG00000008270	RTCB	96	97.660	ENSGALG00000012611	RTCB	93	97.660	Gallus_gallus
ENSOCUG00000008270	RTCB	96	94.468	ENSGAFG00000004198	rtcb	93	94.468	Gambusia_affinis
ENSOCUG00000008270	RTCB	96	93.404	ENSGACG00000000586	rtcb	93	93.404	Gasterosteus_aculeatus
ENSOCUG00000008270	RTCB	96	95.763	ENSGAGG00000019133	RTCB	98	95.763	Gopherus_agassizii
ENSOCUG00000008270	RTCB	96	99.574	ENSGGOG00000011402	RTCB	93	99.574	Gorilla_gorilla
ENSOCUG00000008270	RTCB	96	92.766	ENSHBUG00000020571	rtcb	93	92.766	Haplochromis_burtoni
ENSOCUG00000008270	RTCB	92	67.253	ENSHGLG00000001066	-	96	67.253	Heterocephalus_glaber_female
ENSOCUG00000008270	RTCB	96	99.362	ENSHGLG00000004492	RTCB	93	99.362	Heterocephalus_glaber_female
ENSOCUG00000008270	RTCB	96	99.362	ENSHGLG00100008965	RTCB	93	99.362	Heterocephalus_glaber_male
ENSOCUG00000008270	RTCB	96	91.525	ENSHCOG00000006450	rtcb	93	91.525	Hippocampus_comes
ENSOCUG00000008270	RTCB	96	94.043	ENSIPUG00000015443	rtcb	93	94.043	Ictalurus_punctatus
ENSOCUG00000008270	RTCB	96	99.362	ENSSTOG00000003878	RTCB	93	99.362	Ictidomys_tridecemlineatus
ENSOCUG00000008270	RTCB	96	99.149	ENSJJAG00000010667	Rtcb	93	99.149	Jaculus_jaculus
ENSOCUG00000008270	RTCB	96	94.043	ENSKMAG00000013178	rtcb	93	94.043	Kryptolebias_marmoratus
ENSOCUG00000008270	RTCB	96	93.191	ENSLBEG00000000214	rtcb	93	93.191	Labrus_bergylta
ENSOCUG00000008270	RTCB	96	94.255	ENSLBEG00000010566	RTCB	93	94.255	Labrus_bergylta
ENSOCUG00000008270	RTCB	96	95.106	ENSLACG00000013033	RTCB	93	95.106	Latimeria_chalumnae
ENSOCUG00000008270	RTCB	96	94.468	ENSLOCG00000016515	rtcb	93	94.468	Lepisosteus_oculatus
ENSOCUG00000008270	RTCB	96	98.723	ENSLAFG00000002082	RTCB	93	98.723	Loxodonta_africana
ENSOCUG00000008270	RTCB	96	98.936	ENSMFAG00000034419	RTCB	93	98.936	Macaca_fascicularis
ENSOCUG00000008270	RTCB	96	98.936	ENSMMUG00000006720	RTCB	93	98.936	Macaca_mulatta
ENSOCUG00000008270	RTCB	96	98.936	ENSMNEG00000040669	RTCB	93	98.936	Macaca_nemestrina
ENSOCUG00000008270	RTCB	96	99.149	ENSMLEG00000040505	RTCB	93	99.149	Mandrillus_leucophaeus
ENSOCUG00000008270	RTCB	99	91.393	ENSMAMG00000020676	rtcb	93	94.043	Mastacembelus_armatus
ENSOCUG00000008270	RTCB	96	92.766	ENSMZEG00005018942	rtcb	93	92.766	Maylandia_zebra
ENSOCUG00000008270	RTCB	96	97.246	ENSMGAG00000012805	RTCB	93	97.246	Meleagris_gallopavo
ENSOCUG00000008270	RTCB	54	100.000	ENSMAUG00000008301	Rtcb	88	100.000	Mesocricetus_auratus
ENSOCUG00000008270	RTCB	96	99.362	ENSMICG00000013303	-	93	99.362	Microcebus_murinus
ENSOCUG00000008270	RTCB	96	78.936	ENSMICG00000036677	-	92	78.936	Microcebus_murinus
ENSOCUG00000008270	RTCB	96	99.362	ENSMOCG00000002440	Rtcb	93	99.362	Microtus_ochrogaster
ENSOCUG00000008270	RTCB	96	94.043	ENSMMOG00000005987	rtcb	93	94.043	Mola_mola
ENSOCUG00000008270	RTCB	96	97.872	ENSMODG00000001414	RTCB	93	97.872	Monodelphis_domestica
ENSOCUG00000008270	RTCB	96	94.468	ENSMALG00000007603	rtcb	93	94.468	Monopterus_albus
ENSOCUG00000008270	RTCB	96	99.362	MGP_CAROLIEiJ_G0015689	Rtcb	93	99.362	Mus_caroli
ENSOCUG00000008270	RTCB	96	99.362	ENSMUSG00000001783	Rtcb	93	99.362	Mus_musculus
ENSOCUG00000008270	RTCB	96	99.362	MGP_PahariEiJ_G0031396	Rtcb	93	99.362	Mus_pahari
ENSOCUG00000008270	RTCB	96	99.362	MGP_SPRETEiJ_G0016507	Rtcb	93	99.362	Mus_spretus
ENSOCUG00000008270	RTCB	96	99.362	ENSMPUG00000012285	RTCB	93	99.362	Mustela_putorius_furo
ENSOCUG00000008270	RTCB	99	94.490	ENSMLUG00000007803	RTCB	96	94.490	Myotis_lucifugus
ENSOCUG00000008270	RTCB	67	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSOCUG00000008270	RTCB	96	92.979	ENSNBRG00000017202	rtcb	93	92.979	Neolamprologus_brichardi
ENSOCUG00000008270	RTCB	96	99.574	ENSNLEG00000004960	RTCB	93	99.574	Nomascus_leucogenys
ENSOCUG00000008270	RTCB	96	70.638	ENSMEUG00000007809	-	93	70.638	Notamacropus_eugenii
ENSOCUG00000008270	RTCB	75	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSOCUG00000008270	RTCB	96	64.530	ENSODEG00000005042	-	91	64.530	Octodon_degus
ENSOCUG00000008270	RTCB	77	100.000	ENSODEG00000013033	-	91	100.000	Octodon_degus
ENSOCUG00000008270	RTCB	97	93.869	ENSONIG00000007474	rtcb	94	93.869	Oreochromis_niloticus
ENSOCUG00000008270	RTCB	96	97.872	ENSOANG00000005524	RTCB	93	97.872	Ornithorhynchus_anatinus
ENSOCUG00000008270	RTCB	96	93.617	ENSORLG00000020093	rtcb	93	93.617	Oryzias_latipes
ENSOCUG00000008270	RTCB	96	93.617	ENSORLG00020003706	rtcb	93	93.617	Oryzias_latipes_hni
ENSOCUG00000008270	RTCB	96	93.830	ENSORLG00015002968	rtcb	93	93.830	Oryzias_latipes_hsok
ENSOCUG00000008270	RTCB	96	93.404	ENSOMEG00000021278	rtcb	93	93.404	Oryzias_melastigma
ENSOCUG00000008270	RTCB	96	98.936	ENSOGAG00000001425	RTCB	93	98.936	Otolemur_garnettii
ENSOCUG00000008270	RTCB	96	99.362	ENSOARG00000018008	RTCB	93	99.362	Ovis_aries
ENSOCUG00000008270	RTCB	96	99.574	ENSPPAG00000028667	RTCB	93	99.574	Pan_paniscus
ENSOCUG00000008270	RTCB	96	99.574	ENSPPRG00000004038	RTCB	93	99.574	Panthera_pardus
ENSOCUG00000008270	RTCB	90	95.682	ENSPTIG00000020499	RTCB	90	95.682	Panthera_tigris_altaica
ENSOCUG00000008270	RTCB	96	99.574	ENSPTRG00000014287	RTCB	93	99.574	Pan_troglodytes
ENSOCUG00000008270	RTCB	96	98.936	ENSPANG00000016035	RTCB	93	98.936	Papio_anubis
ENSOCUG00000008270	RTCB	96	92.340	ENSPKIG00000001881	rtcb	93	92.340	Paramormyrops_kingsleyae
ENSOCUG00000008270	RTCB	87	97.882	ENSPSIG00000011690	RTCB	92	97.882	Pelodiscus_sinensis
ENSOCUG00000008270	RTCB	96	94.255	ENSPMGG00000016672	rtcb	93	94.255	Periophthalmus_magnuspinnatus
ENSOCUG00000008270	RTCB	96	99.362	ENSPEMG00000019548	Rtcb	93	99.362	Peromyscus_maniculatus_bairdii
ENSOCUG00000008270	RTCB	96	91.489	ENSPMAG00000005657	rtcb	93	91.489	Petromyzon_marinus
ENSOCUG00000008270	RTCB	96	98.298	ENSPCIG00000009467	RTCB	93	98.298	Phascolarctos_cinereus
ENSOCUG00000008270	RTCB	96	94.894	ENSPFOG00000003058	rtcb	93	94.894	Poecilia_formosa
ENSOCUG00000008270	RTCB	96	94.681	ENSPLAG00000017663	rtcb	93	94.681	Poecilia_latipinna
ENSOCUG00000008270	RTCB	96	94.894	ENSPMEG00000006227	rtcb	93	94.894	Poecilia_mexicana
ENSOCUG00000008270	RTCB	96	94.468	ENSPREG00000018467	rtcb	93	94.468	Poecilia_reticulata
ENSOCUG00000008270	RTCB	96	99.574	ENSPPYG00000011752	RTCB	93	99.574	Pongo_abelii
ENSOCUG00000008270	RTCB	96	81.356	ENSPCAG00000013641	RTCB	100	81.356	Procavia_capensis
ENSOCUG00000008270	RTCB	96	99.149	ENSPCOG00000017243	RTCB	93	99.149	Propithecus_coquereli
ENSOCUG00000008270	RTCB	96	98.511	ENSPVAG00000002380	RTCB	100	98.511	Pteropus_vampyrus
ENSOCUG00000008270	RTCB	96	92.766	ENSPNYG00000022760	rtcb	93	92.766	Pundamilia_nyererei
ENSOCUG00000008270	RTCB	96	94.681	ENSPNAG00000009209	rtcb	93	94.681	Pygocentrus_nattereri
ENSOCUG00000008270	RTCB	96	99.362	ENSRNOG00000004813	Rtcb	93	99.362	Rattus_norvegicus
ENSOCUG00000008270	RTCB	96	89.597	ENSRBIG00000042090	RTCB	93	89.597	Rhinopithecus_bieti
ENSOCUG00000008270	RTCB	96	94.894	ENSSBOG00000020085	-	93	94.894	Saimiri_boliviensis_boliviensis
ENSOCUG00000008270	RTCB	90	99.089	ENSSHAG00000016277	RTCB	93	99.089	Sarcophilus_harrisii
ENSOCUG00000008270	RTCB	96	92.553	ENSSFOG00015000763	rtcb	93	92.553	Scleropages_formosus
ENSOCUG00000008270	RTCB	96	93.191	ENSSFOG00015011572	RTCB	93	93.191	Scleropages_formosus
ENSOCUG00000008270	RTCB	97	91.561	ENSSMAG00000005096	rtcb	93	90.000	Scophthalmus_maximus
ENSOCUG00000008270	RTCB	96	93.404	ENSSDUG00000012605	rtcb	93	93.404	Seriola_dumerili
ENSOCUG00000008270	RTCB	96	93.404	ENSSLDG00000019458	rtcb	93	93.404	Seriola_lalandi_dorsalis
ENSOCUG00000008270	RTCB	61	73.244	ENSSARG00000004799	-	63	73.244	Sorex_araneus
ENSOCUG00000008270	RTCB	96	95.957	ENSSPUG00000012814	RTCB	93	95.957	Sphenodon_punctatus
ENSOCUG00000008270	RTCB	96	94.468	ENSSPAG00000004623	rtcb	93	94.468	Stegastes_partitus
ENSOCUG00000008270	RTCB	96	99.574	ENSSSCG00000000158	RTCB	93	99.574	Sus_scrofa
ENSOCUG00000008270	RTCB	96	97.660	ENSTGUG00000010947	RTCB	93	97.660	Taeniopygia_guttata
ENSOCUG00000008270	RTCB	87	94.824	ENSTRUG00000009880	rtcb	100	92.169	Takifugu_rubripes
ENSOCUG00000008270	RTCB	96	93.404	ENSTNIG00000002484	rtcb	93	93.404	Tetraodon_nigroviridis
ENSOCUG00000008270	RTCB	96	85.106	ENSTBEG00000004418	RTCB	93	85.106	Tupaia_belangeri
ENSOCUG00000008270	RTCB	96	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSOCUG00000008270	RTCB	96	99.362	ENSUAMG00000022792	RTCB	93	99.362	Ursus_americanus
ENSOCUG00000008270	RTCB	96	99.362	ENSUMAG00000017225	RTCB	93	99.362	Ursus_maritimus
ENSOCUG00000008270	RTCB	96	99.574	ENSVPAG00000005375	RTCB	93	99.574	Vicugna_pacos
ENSOCUG00000008270	RTCB	96	99.362	ENSVVUG00000023408	RTCB	93	99.362	Vulpes_vulpes
ENSOCUG00000008270	RTCB	96	94.255	ENSXETG00000011523	rtcb	93	94.255	Xenopus_tropicalis
ENSOCUG00000008270	RTCB	96	94.468	ENSXMAG00000002855	rtcb	93	94.468	Xiphophorus_maculatus