EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000008336 (Gene tree)
Gene ID: 100345182
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 62190 bases
Position: chr14:161805804-161867993
Accession: 100345182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000018318	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000028303	SCAF4-201	3851	XM_008267178	ENSOCUP00000018318	1132 (aa)	XP_008265400	G1TMV4

Gene Model

Click here to download ENSOCUG00000008336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008336	SCAF4	100	90.917	ENSG00000156304	SCAF4	100	90.829	Homo_sapiens
ENSOCUG00000008336	SCAF4	72	86.962	ENSAMEG00000014987	SCAF4	97	87.008	Ailuropoda_melanoleuca
ENSOCUG00000008336	SCAF4	99	73.293	ENSAPLG00000002509	SCAF4	59	82.165	Anas_platyrhynchos
ENSOCUG00000008336	SCAF4	58	77.729	ENSACAG00000002569	SCAF4	52	85.000	Anolis_carolinensis
ENSOCUG00000008336	SCAF4	100	88.841	ENSANAG00000037494	SCAF4	100	89.014	Aotus_nancymaae
ENSOCUG00000008336	SCAF4	52	62.362	ENSACLG00000024833	scaf4b	55	74.051	Astatotilapia_calliptera
ENSOCUG00000008336	SCAF4	93	50.408	ENSAMXG00000008585	scaf4a	60	62.462	Astyanax_mexicanus
ENSOCUG00000008336	SCAF4	100	87.706	ENSBTAG00000018855	SCAF4	100	87.013	Bos_taurus
ENSOCUG00000008336	SCAF4	100	89.100	ENSCJAG00000008993	SCAF4	99	90.453	Callithrix_jacchus
ENSOCUG00000008336	SCAF4	99	88.307	ENSCAFG00000008863	SCAF4	99	88.220	Canis_familiaris
ENSOCUG00000008336	SCAF4	99	86.328	ENSCAFG00020026019	SCAF4	100	86.888	Canis_lupus_dingo
ENSOCUG00000008336	SCAF4	100	87.111	ENSCHIG00000008385	SCAF4	100	87.024	Capra_hircus
ENSOCUG00000008336	SCAF4	91	90.385	ENSTSYG00000011344	SCAF4	98	90.323	Carlito_syrichta
ENSOCUG00000008336	SCAF4	100	89.719	ENSCPOG00000012443	SCAF4	100	89.982	Cavia_porcellus
ENSOCUG00000008336	SCAF4	100	89.100	ENSCCAG00000033727	SCAF4	100	88.841	Cebus_capucinus
ENSOCUG00000008336	SCAF4	100	89.023	ENSCATG00000030379	SCAF4	100	89.196	Cercocebus_atys
ENSOCUG00000008336	SCAF4	99	86.806	ENSCLAG00000006298	SCAF4	100	87.500	Chinchilla_lanigera
ENSOCUG00000008336	SCAF4	100	88.927	ENSCSAG00000009438	SCAF4	100	89.014	Chlorocebus_sabaeus
ENSOCUG00000008336	SCAF4	100	89.187	ENSCANG00000029847	SCAF4	100	88.927	Colobus_angolensis_palliatus
ENSOCUG00000008336	SCAF4	67	86.761	ENSCGRG00001020821	Scaf4	64	84.879	Cricetulus_griseus_chok1gshd
ENSOCUG00000008336	SCAF4	67	86.856	ENSCGRG00000014360	Scaf4	69	81.829	Cricetulus_griseus_crigri
ENSOCUG00000008336	SCAF4	100	84.848	ENSDNOG00000019014	SCAF4	94	84.762	Dasypus_novemcinctus
ENSOCUG00000008336	SCAF4	96	75.224	ENSETEG00000000583	SCAF4	99	74.156	Echinops_telfairi
ENSOCUG00000008336	SCAF4	100	88.831	ENSEASG00005007756	SCAF4	100	88.571	Equus_asinus_asinus
ENSOCUG00000008336	SCAF4	100	88.745	ENSECAG00000014248	SCAF4	100	88.571	Equus_caballus
ENSOCUG00000008336	SCAF4	57	53.584	ENSELUG00000002779	SCAF8	70	69.565	Esox_lucius
ENSOCUG00000008336	SCAF4	100	88.235	ENSFCAG00000002228	SCAF4	100	88.495	Felis_catus
ENSOCUG00000008336	SCAF4	99	85.322	ENSFDAG00000017780	SCAF4	100	85.150	Fukomys_damarensis
ENSOCUG00000008336	SCAF4	59	60.000	ENSFHEG00000007634	scaf4b	52	77.698	Fundulus_heteroclitus
ENSOCUG00000008336	SCAF4	100	74.310	ENSGALG00000033965	SCAF4	59	82.549	Gallus_gallus
ENSOCUG00000008336	SCAF4	93	89.315	ENSGGOG00000015557	SCAF4	100	92.273	Gorilla_gorilla
ENSOCUG00000008336	SCAF4	100	87.039	ENSHGLG00000010582	SCAF4	100	87.811	Heterocephalus_glaber_female
ENSOCUG00000008336	SCAF4	99	86.881	ENSHGLG00100009441	SCAF4	100	87.663	Heterocephalus_glaber_male
ENSOCUG00000008336	SCAF4	99	81.802	ENSSTOG00000004450	SCAF4	100	82.240	Ictidomys_tridecemlineatus
ENSOCUG00000008336	SCAF4	99	85.951	ENSJJAG00000019447	Scaf4	99	85.340	Jaculus_jaculus
ENSOCUG00000008336	SCAF4	60	57.246	ENSKMAG00000005742	scaf4b	54	73.885	Kryptolebias_marmoratus
ENSOCUG00000008336	SCAF4	97	59.513	ENSLACG00000013913	SCAF4	59	68.536	Latimeria_chalumnae
ENSOCUG00000008336	SCAF4	79	60.883	ENSLOCG00000009162	scaf4a	59	66.667	Lepisosteus_oculatus
ENSOCUG00000008336	SCAF4	99	87.407	ENSLAFG00000010710	SCAF4	100	87.119	Loxodonta_africana
ENSOCUG00000008336	SCAF4	100	88.793	ENSMFAG00000037668	SCAF4	100	88.793	Macaca_fascicularis
ENSOCUG00000008336	SCAF4	100	88.707	ENSMMUG00000001712	SCAF4	100	88.707	Macaca_mulatta
ENSOCUG00000008336	SCAF4	100	88.803	ENSMNEG00000032966	SCAF4	100	88.630	Macaca_nemestrina
ENSOCUG00000008336	SCAF4	99	88.850	ENSMLEG00000039674	SCAF4	100	89.111	Mandrillus_leucophaeus
ENSOCUG00000008336	SCAF4	99	74.196	ENSMGAG00000014515	SCAF4	59	82.462	Meleagris_gallopavo
ENSOCUG00000008336	SCAF4	99	85.902	ENSMAUG00000013307	Scaf4	100	85.627	Mesocricetus_auratus
ENSOCUG00000008336	SCAF4	100	88.918	ENSMICG00000005256	SCAF4	100	88.571	Microcebus_murinus
ENSOCUG00000008336	SCAF4	100	82.368	ENSMOCG00000012087	Scaf4	100	82.815	Microtus_ochrogaster
ENSOCUG00000008336	SCAF4	63	85.331	ENSMODG00000021040	SCAF4	100	80.035	Monodelphis_domestica
ENSOCUG00000008336	SCAF4	99	86.340	MGP_CAROLIEiJ_G0020944	Scaf4	95	86.211	Mus_caroli
ENSOCUG00000008336	SCAF4	100	80.506	ENSMUSG00000022983	Scaf4	95	86.082	Mus_musculus
ENSOCUG00000008336	SCAF4	100	80.357	MGP_PahariEiJ_G0016649	Scaf4	100	85.751	Mus_pahari
ENSOCUG00000008336	SCAF4	100	80.999	MGP_SPRETEiJ_G0021850	Scaf4	95	85.825	Mus_spretus
ENSOCUG00000008336	SCAF4	100	87.241	ENSMPUG00000001078	SCAF4	100	87.414	Mustela_putorius_furo
ENSOCUG00000008336	SCAF4	99	73.284	ENSMLUG00000011472	SCAF4	79	80.022	Myotis_lucifugus
ENSOCUG00000008336	SCAF4	99	87.074	ENSNGAG00000005214	Scaf4	99	87.369	Nannospalax_galili
ENSOCUG00000008336	SCAF4	100	89.100	ENSNLEG00000003569	SCAF4	100	89.014	Nomascus_leucogenys
ENSOCUG00000008336	SCAF4	85	79.310	ENSOPRG00000007016	SCAF4	77	88.208	Ochotona_princeps
ENSOCUG00000008336	SCAF4	100	85.009	ENSODEG00000002718	SCAF4	100	85.094	Octodon_degus
ENSOCUG00000008336	SCAF4	70	57.828	ENSONIG00000004687	scaf4a	52	74.390	Oreochromis_niloticus
ENSOCUG00000008336	SCAF4	99	88.346	ENSOGAG00000014653	SCAF4	94	88.346	Otolemur_garnettii
ENSOCUG00000008336	SCAF4	99	86.562	ENSOARG00000013894	SCAF4	99	86.222	Ovis_aries
ENSOCUG00000008336	SCAF4	100	89.100	ENSPPAG00000028535	SCAF4	100	89.014	Pan_paniscus
ENSOCUG00000008336	SCAF4	99	88.210	ENSPPRG00000000635	SCAF4	100	88.472	Panthera_pardus
ENSOCUG00000008336	SCAF4	99	85.852	ENSPTIG00000021578	SCAF4	99	83.551	Panthera_tigris_altaica
ENSOCUG00000008336	SCAF4	100	89.100	ENSPTRG00000013848	SCAF4	100	89.014	Pan_troglodytes
ENSOCUG00000008336	SCAF4	100	88.707	ENSPANG00000017332	SCAF4	100	88.879	Papio_anubis
ENSOCUG00000008336	SCAF4	65	64.173	ENSPKIG00000022408	scaf4a	90	66.865	Paramormyrops_kingsleyae
ENSOCUG00000008336	SCAF4	99	73.826	ENSPSIG00000014242	SCAF4	57	83.205	Pelodiscus_sinensis
ENSOCUG00000008336	SCAF4	99	83.526	ENSPCIG00000028183	SCAF4	91	82.547	Phascolarctos_cinereus
ENSOCUG00000008336	SCAF4	75	55.639	ENSPFOG00000017156	scaf4a	55	72.561	Poecilia_formosa
ENSOCUG00000008336	SCAF4	100	88.927	ENSPPYG00000011355	SCAF4	100	88.927	Pongo_abelii
ENSOCUG00000008336	SCAF4	100	78.874	ENSPCAG00000009998	SCAF4	95	84.113	Procavia_capensis
ENSOCUG00000008336	SCAF4	100	89.437	ENSPCOG00000018710	SCAF4	100	89.524	Propithecus_coquereli
ENSOCUG00000008336	SCAF4	100	87.619	ENSPVAG00000005220	SCAF4	100	87.446	Pteropus_vampyrus
ENSOCUG00000008336	SCAF4	52	61.624	ENSPNYG00000010526	scaf4b	55	74.051	Pundamilia_nyererei
ENSOCUG00000008336	SCAF4	75	58.087	ENSPNAG00000016892	scaf4a	60	63.785	Pygocentrus_nattereri
ENSOCUG00000008336	SCAF4	98	86.881	ENSRNOG00000002104	Scaf4	94	85.233	Rattus_norvegicus
ENSOCUG00000008336	SCAF4	99	87.128	ENSRBIG00000040007	SCAF4	61	88.333	Rhinopithecus_bieti
ENSOCUG00000008336	SCAF4	100	89.706	ENSRROG00000029488	SCAF4	100	89.014	Rhinopithecus_roxellana
ENSOCUG00000008336	SCAF4	63	84.203	ENSSHAG00000001581	SCAF4	100	79.671	Sarcophilus_harrisii
ENSOCUG00000008336	SCAF4	65	52.799	ENSSFOG00015006338	scaf4a	54	56.909	Scleropages_formosus
ENSOCUG00000008336	SCAF4	64	58.909	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSOCUG00000008336	SCAF4	80	53.395	ENSSDUG00000012918	scaf4a	54	58.963	Seriola_dumerili
ENSOCUG00000008336	SCAF4	100	85.418	ENSSARG00000009994	SCAF4	100	86.022	Sorex_araneus
ENSOCUG00000008336	SCAF4	100	89.895	ENSSSCG00000021023	SCAF4	100	89.807	Sus_scrofa
ENSOCUG00000008336	SCAF4	73	78.693	ENSTGUG00000013464	SCAF4	57	86.047	Taeniopygia_guttata
ENSOCUG00000008336	SCAF4	99	87.686	ENSTTRG00000010963	SCAF4	100	87.074	Tursiops_truncatus
ENSOCUG00000008336	SCAF4	100	90.203	ENSUAMG00000008860	SCAF4	100	90.468	Ursus_americanus
ENSOCUG00000008336	SCAF4	99	86.766	ENSUMAG00000016962	SCAF4	100	86.766	Ursus_maritimus
ENSOCUG00000008336	SCAF4	99	88.344	ENSVVUG00000002953	SCAF4	100	88.256	Vulpes_vulpes
ENSOCUG00000008336	SCAF4	99	56.757	ENSXETG00000007351	scaf4	63	65.674	Xenopus_tropicalis