EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000008580 (Gene tree)
Gene ID: 100347348
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 16297 bases
Position: chrGL018703:4662893-4679189
Accession: 100347348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000007415	PolyA_pol	PF01743.20	6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000008578	TRNT1-201	1799	-	ENSOCUP00000007415	431 (aa)	XP_002720670	G1SVF9

Gene Model

Click here to download ENSOCUG00000008580's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008580	TRNT1	99	84.562	ENSG00000072756	TRNT1	100	84.562	Homo_sapiens
ENSOCUG00000008580	TRNT1	98	64.387	ENSAPOG00000013687	trnt1	99	64.387	Acanthochromis_polyacanthus
ENSOCUG00000008580	TRNT1	99	85.092	ENSAMEG00000014520	TRNT1	100	85.092	Ailuropoda_melanoleuca
ENSOCUG00000008580	TRNT1	94	66.995	ENSACIG00000021706	trnt1	95	66.995	Amphilophus_citrinellus
ENSOCUG00000008580	TRNT1	94	66.995	ENSAOCG00000024612	trnt1	95	66.995	Amphiprion_ocellaris
ENSOCUG00000008580	TRNT1	91	61.381	ENSAPEG00000022627	trnt1	90	61.381	Amphiprion_percula
ENSOCUG00000008580	TRNT1	94	67.990	ENSATEG00000008928	trnt1	99	67.990	Anabas_testudineus
ENSOCUG00000008580	TRNT1	90	74.419	ENSAPLG00000004258	TRNT1	96	74.419	Anas_platyrhynchos
ENSOCUG00000008580	TRNT1	98	70.163	ENSACAG00000005657	TRNT1	98	70.163	Anolis_carolinensis
ENSOCUG00000008580	TRNT1	99	85.253	ENSANAG00000024802	TRNT1	100	85.253	Aotus_nancymaae
ENSOCUG00000008580	TRNT1	99	64.706	ENSACLG00000022227	trnt1	99	64.706	Astatotilapia_calliptera
ENSOCUG00000008580	TRNT1	97	68.029	ENSAMXG00000003960	trnt1	97	67.866	Astyanax_mexicanus
ENSOCUG00000008580	TRNT1	99	85.484	ENSBTAG00000019534	TRNT1	100	85.484	Bos_taurus
ENSOCUG00000008580	TRNT1	94	42.654	WBGene00010089	hpo-31	95	42.654	Caenorhabditis_elegans
ENSOCUG00000008580	TRNT1	99	85.253	ENSCJAG00000015466	TRNT1	100	85.253	Callithrix_jacchus
ENSOCUG00000008580	TRNT1	100	84.174	ENSCAFG00000005985	TRNT1	100	84.174	Canis_familiaris
ENSOCUG00000008580	TRNT1	100	84.174	ENSCAFG00020014746	TRNT1	100	84.174	Canis_lupus_dingo
ENSOCUG00000008580	TRNT1	99	85.253	ENSCHIG00000007030	TRNT1	99	85.253	Capra_hircus
ENSOCUG00000008580	TRNT1	99	85.023	ENSTSYG00000013390	TRNT1	100	85.023	Carlito_syrichta
ENSOCUG00000008580	TRNT1	88	69.841	ENSCAPG00000006891	TRNT1	100	69.841	Cavia_aperea
ENSOCUG00000008580	TRNT1	99	84.988	ENSCPOG00000007849	TRNT1	100	86.567	Cavia_porcellus
ENSOCUG00000008580	TRNT1	93	84.788	ENSCCAG00000002919	TRNT1	100	84.788	Cebus_capucinus
ENSOCUG00000008580	TRNT1	100	84.475	ENSCATG00000031985	TRNT1	99	84.475	Cercocebus_atys
ENSOCUG00000008580	TRNT1	99	85.219	ENSCLAG00000005186	TRNT1	95	89.655	Chinchilla_lanigera
ENSOCUG00000008580	TRNT1	99	85.253	ENSCSAG00000011052	TRNT1	100	85.253	Chlorocebus_sabaeus
ENSOCUG00000008580	TRNT1	84	86.139	ENSCHOG00000005712	TRNT1	85	86.139	Choloepus_hoffmanni
ENSOCUG00000008580	TRNT1	99	74.884	ENSCPBG00000017636	TRNT1	98	74.884	Chrysemys_picta_bellii
ENSOCUG00000008580	TRNT1	93	45.050	ENSCING00000007069	-	99	45.050	Ciona_intestinalis
ENSOCUG00000008580	TRNT1	93	45.906	ENSCSAVG00000007494	-	95	45.906	Ciona_savignyi
ENSOCUG00000008580	TRNT1	99	84.793	ENSCANG00000039030	TRNT1	100	84.793	Colobus_angolensis_palliatus
ENSOCUG00000008580	TRNT1	99	86.406	ENSCGRG00001009998	Trnt1	100	86.406	Cricetulus_griseus_chok1gshd
ENSOCUG00000008580	TRNT1	99	86.406	ENSCGRG00000013410	Trnt1	100	86.406	Cricetulus_griseus_crigri
ENSOCUG00000008580	TRNT1	97	67.067	ENSCSEG00000008157	trnt1	97	67.067	Cynoglossus_semilaevis
ENSOCUG00000008580	TRNT1	94	67.980	ENSCVAG00000019770	trnt1	96	67.980	Cyprinodon_variegatus
ENSOCUG00000008580	TRNT1	99	67.765	ENSDARG00000075297	trnt1	99	67.765	Danio_rerio
ENSOCUG00000008580	TRNT1	99	83.410	ENSDNOG00000008837	TRNT1	100	83.410	Dasypus_novemcinctus
ENSOCUG00000008580	TRNT1	99	84.562	ENSDORG00000014035	Trnt1	100	84.562	Dipodomys_ordii
ENSOCUG00000008580	TRNT1	93	48.762	FBgn0037369	CG2100	83	48.762	Drosophila_melanogaster
ENSOCUG00000008580	TRNT1	57	85.714	ENSETEG00000018177	TRNT1	98	85.714	Echinops_telfairi
ENSOCUG00000008580	TRNT1	94	61.538	ENSEBUG00000012779	-	95	61.538	Eptatretus_burgeri
ENSOCUG00000008580	TRNT1	99	84.562	ENSEASG00005003577	TRNT1	100	84.562	Equus_asinus_asinus
ENSOCUG00000008580	TRNT1	99	84.793	ENSECAG00000014420	TRNT1	100	84.793	Equus_caballus
ENSOCUG00000008580	TRNT1	99	82.719	ENSEEUG00000009567	TRNT1	100	82.719	Erinaceus_europaeus
ENSOCUG00000008580	TRNT1	99	66.745	ENSELUG00000003802	trnt1	99	66.745	Esox_lucius
ENSOCUG00000008580	TRNT1	100	85.092	ENSFCAG00000026805	TRNT1	100	85.092	Felis_catus
ENSOCUG00000008580	TRNT1	89	74.286	ENSFALG00000013539	TRNT1	100	74.286	Ficedula_albicollis
ENSOCUG00000008580	TRNT1	99	84.527	ENSFDAG00000018412	TRNT1	100	84.328	Fukomys_damarensis
ENSOCUG00000008580	TRNT1	97	68.182	ENSFHEG00000019294	trnt1	98	68.182	Fundulus_heteroclitus
ENSOCUG00000008580	TRNT1	97	66.667	ENSGMOG00000007460	trnt1	97	66.667	Gadus_morhua
ENSOCUG00000008580	TRNT1	94	71.358	ENSGALG00000017368	TRNT1	94	71.358	Gallus_gallus
ENSOCUG00000008580	TRNT1	97	66.507	ENSGAFG00000008647	trnt1	98	66.507	Gambusia_affinis
ENSOCUG00000008580	TRNT1	99	64.941	ENSGACG00000011903	trnt1	99	64.941	Gasterosteus_aculeatus
ENSOCUG00000008580	TRNT1	95	78.431	ENSGAGG00000020942	TRNT1	93	78.431	Gopherus_agassizii
ENSOCUG00000008580	TRNT1	99	84.793	ENSGGOG00000015286	TRNT1	100	84.793	Gorilla_gorilla
ENSOCUG00000008580	TRNT1	99	64.706	ENSHBUG00000002797	trnt1	99	64.706	Haplochromis_burtoni
ENSOCUG00000008580	TRNT1	99	79.493	ENSHGLG00000000221	-	99	79.493	Heterocephalus_glaber_female
ENSOCUG00000008580	TRNT1	99	84.758	ENSHGLG00000003649	TRNT1	99	84.758	Heterocephalus_glaber_female
ENSOCUG00000008580	TRNT1	99	83.834	ENSHGLG00100016421	TRNT1	99	83.834	Heterocephalus_glaber_male
ENSOCUG00000008580	TRNT1	95	65.693	ENSHCOG00000010618	trnt1	96	65.693	Hippocampus_comes
ENSOCUG00000008580	TRNT1	97	67.225	ENSIPUG00000000971	trnt1	97	67.225	Ictalurus_punctatus
ENSOCUG00000008580	TRNT1	99	85.057	ENSSTOG00000000150	TRNT1	98	89.604	Ictidomys_tridecemlineatus
ENSOCUG00000008580	TRNT1	99	85.945	ENSJJAG00000018561	Trnt1	99	85.945	Jaculus_jaculus
ENSOCUG00000008580	TRNT1	94	68.227	ENSKMAG00000011307	trnt1	95	68.227	Kryptolebias_marmoratus
ENSOCUG00000008580	TRNT1	91	63.427	ENSLBEG00000019457	trnt1	92	63.427	Labrus_bergylta
ENSOCUG00000008580	TRNT1	97	71.770	ENSLACG00000013227	TRNT1	96	71.770	Latimeria_chalumnae
ENSOCUG00000008580	TRNT1	97	69.231	ENSLOCG00000011105	trnt1	95	69.231	Lepisosteus_oculatus
ENSOCUG00000008580	TRNT1	99	84.562	ENSLAFG00000023191	TRNT1	100	84.562	Loxodonta_africana
ENSOCUG00000008580	TRNT1	100	84.703	ENSMFAG00000045113	TRNT1	99	84.703	Macaca_fascicularis
ENSOCUG00000008580	TRNT1	100	84.703	ENSMMUG00000017983	TRNT1	99	84.703	Macaca_mulatta
ENSOCUG00000008580	TRNT1	100	84.703	ENSMNEG00000037805	TRNT1	99	84.703	Macaca_nemestrina
ENSOCUG00000008580	TRNT1	89	86.387	ENSMLEG00000033671	TRNT1	99	86.387	Mandrillus_leucophaeus
ENSOCUG00000008580	TRNT1	99	65.493	ENSMAMG00000023401	trnt1	99	65.493	Mastacembelus_armatus
ENSOCUG00000008580	TRNT1	99	64.706	ENSMZEG00005009141	trnt1	99	64.706	Maylandia_zebra
ENSOCUG00000008580	TRNT1	74	70.717	ENSMGAG00000009971	TRNT1	100	70.717	Meleagris_gallopavo
ENSOCUG00000008580	TRNT1	99	86.406	ENSMAUG00000020707	Trnt1	100	86.406	Mesocricetus_auratus
ENSOCUG00000008580	TRNT1	99	85.484	ENSMICG00000016615	TRNT1	100	85.484	Microcebus_murinus
ENSOCUG00000008580	TRNT1	99	85.253	ENSMOCG00000004539	Trnt1	100	85.253	Microtus_ochrogaster
ENSOCUG00000008580	TRNT1	94	66.502	ENSMMOG00000010742	trnt1	96	66.502	Mola_mola
ENSOCUG00000008580	TRNT1	99	78.802	ENSMODG00000004368	TRNT1	100	78.802	Monodelphis_domestica
ENSOCUG00000008580	TRNT1	94	66.256	ENSMALG00000008376	trnt1	94	66.256	Monopterus_albus
ENSOCUG00000008580	TRNT1	99	85.945	MGP_CAROLIEiJ_G0028698	Trnt1	100	85.945	Mus_caroli
ENSOCUG00000008580	TRNT1	99	85.484	ENSMUSG00000013736	Trnt1	100	85.484	Mus_musculus
ENSOCUG00000008580	TRNT1	99	85.253	MGP_PahariEiJ_G0022449	Trnt1	100	86.207	Mus_pahari
ENSOCUG00000008580	TRNT1	99	85.484	MGP_SPRETEiJ_G0029726	Trnt1	100	85.484	Mus_spretus
ENSOCUG00000008580	TRNT1	100	85.780	ENSMPUG00000017017	TRNT1	100	85.780	Mustela_putorius_furo
ENSOCUG00000008580	TRNT1	90	84.197	ENSMLUG00000011864	TRNT1	100	84.197	Myotis_lucifugus
ENSOCUG00000008580	TRNT1	99	85.945	ENSNGAG00000000537	Trnt1	100	85.945	Nannospalax_galili
ENSOCUG00000008580	TRNT1	80	65.318	ENSNBRG00000023606	trnt1	99	65.318	Neolamprologus_brichardi
ENSOCUG00000008580	TRNT1	99	85.253	ENSNLEG00000003226	TRNT1	100	85.253	Nomascus_leucogenys
ENSOCUG00000008580	TRNT1	99	78.984	ENSMEUG00000004684	TRNT1	99	78.984	Notamacropus_eugenii
ENSOCUG00000008580	TRNT1	89	81.462	ENSOPRG00000015067	TRNT1	99	81.462	Ochotona_princeps
ENSOCUG00000008580	TRNT1	99	84.758	ENSODEG00000007597	TRNT1	99	84.758	Octodon_degus
ENSOCUG00000008580	TRNT1	99	65.412	ENSONIG00000020273	trnt1	98	65.412	Oreochromis_niloticus
ENSOCUG00000008580	TRNT1	99	70.139	ENSOANG00000007514	TRNT1	99	70.139	Ornithorhynchus_anatinus
ENSOCUG00000008580	TRNT1	96	65.632	ENSORLG00000003165	trnt1	99	65.632	Oryzias_latipes
ENSOCUG00000008580	TRNT1	96	66.110	ENSORLG00020022060	trnt1	99	66.110	Oryzias_latipes_hni
ENSOCUG00000008580	TRNT1	96	65.394	ENSORLG00015018915	trnt1	98	65.394	Oryzias_latipes_hsok
ENSOCUG00000008580	TRNT1	97	65.228	ENSOMEG00000003331	trnt1	98	65.228	Oryzias_melastigma
ENSOCUG00000008580	TRNT1	99	85.023	ENSOARG00000008631	TRNT1	99	85.023	Ovis_aries
ENSOCUG00000008580	TRNT1	99	84.562	ENSPPAG00000043566	TRNT1	100	84.562	Pan_paniscus
ENSOCUG00000008580	TRNT1	100	85.321	ENSPPRG00000001327	TRNT1	100	85.321	Panthera_pardus
ENSOCUG00000008580	TRNT1	100	85.321	ENSPTIG00000011448	TRNT1	100	85.321	Panthera_tigris_altaica
ENSOCUG00000008580	TRNT1	99	84.562	ENSPTRG00000014564	TRNT1	100	84.562	Pan_troglodytes
ENSOCUG00000008580	TRNT1	100	84.475	ENSPANG00000025944	TRNT1	99	84.475	Papio_anubis
ENSOCUG00000008580	TRNT1	95	69.118	ENSPKIG00000020015	trnt1	95	69.118	Paramormyrops_kingsleyae
ENSOCUG00000008580	TRNT1	92	75.819	ENSPSIG00000017356	TRNT1	99	77.222	Pelodiscus_sinensis
ENSOCUG00000008580	TRNT1	95	67.237	ENSPMGG00000008888	trnt1	94	67.237	Periophthalmus_magnuspinnatus
ENSOCUG00000008580	TRNT1	99	87.097	ENSPEMG00000019845	Trnt1	100	87.097	Peromyscus_maniculatus_bairdii
ENSOCUG00000008580	TRNT1	99	79.263	ENSPCIG00000030436	TRNT1	100	79.263	Phascolarctos_cinereus
ENSOCUG00000008580	TRNT1	99	65.340	ENSPFOG00000006194	trnt1	99	65.340	Poecilia_formosa
ENSOCUG00000008580	TRNT1	94	67.488	ENSPLAG00000015623	trnt1	99	67.246	Poecilia_latipinna
ENSOCUG00000008580	TRNT1	99	65.340	ENSPMEG00000012216	trnt1	99	67.246	Poecilia_mexicana
ENSOCUG00000008580	TRNT1	97	66.029	ENSPREG00000021470	trnt1	98	66.029	Poecilia_reticulata
ENSOCUG00000008580	TRNT1	99	85.253	ENSPPYG00000013702	TRNT1	100	85.253	Pongo_abelii
ENSOCUG00000008580	TRNT1	89	85.117	ENSPCAG00000001951	TRNT1	100	85.117	Procavia_capensis
ENSOCUG00000008580	TRNT1	99	85.484	ENSPCOG00000022228	TRNT1	100	85.484	Propithecus_coquereli
ENSOCUG00000008580	TRNT1	89	86.979	ENSPVAG00000008784	TRNT1	100	86.979	Pteropus_vampyrus
ENSOCUG00000008580	TRNT1	99	64.706	ENSPNYG00000003120	trnt1	99	64.706	Pundamilia_nyererei
ENSOCUG00000008580	TRNT1	99	66.824	ENSPNAG00000000565	trnt1	99	66.824	Pygocentrus_nattereri
ENSOCUG00000008580	TRNT1	99	85.714	ENSRNOG00000006432	Trnt1	100	85.714	Rattus_norvegicus
ENSOCUG00000008580	TRNT1	99	82.488	ENSRBIG00000042632	TRNT1	100	82.488	Rhinopithecus_bieti
ENSOCUG00000008580	TRNT1	99	85.023	ENSRROG00000036866	TRNT1	100	85.023	Rhinopithecus_roxellana
ENSOCUG00000008580	TRNT1	99	85.945	ENSSBOG00000021208	TRNT1	100	85.945	Saimiri_boliviensis_boliviensis
ENSOCUG00000008580	TRNT1	99	78.802	ENSSHAG00000018861	TRNT1	100	78.802	Sarcophilus_harrisii
ENSOCUG00000008580	TRNT1	99	68.433	ENSSFOG00015020844	trnt1	99	68.925	Scleropages_formosus
ENSOCUG00000008580	TRNT1	94	67.980	ENSSMAG00000015432	trnt1	93	67.980	Scophthalmus_maximus
ENSOCUG00000008580	TRNT1	94	66.502	ENSSDUG00000012320	trnt1	95	66.502	Seriola_dumerili
ENSOCUG00000008580	TRNT1	56	62.917	ENSSLDG00000016463	-	91	62.917	Seriola_lalandi_dorsalis
ENSOCUG00000008580	TRNT1	94	66.502	ENSSLDG00000009325	trnt1	95	66.502	Seriola_lalandi_dorsalis
ENSOCUG00000008580	TRNT1	89	79.427	ENSSPUG00000014153	TRNT1	100	79.427	Sphenodon_punctatus
ENSOCUG00000008580	TRNT1	99	64.471	ENSSPAG00000021005	trnt1	99	64.471	Stegastes_partitus
ENSOCUG00000008580	TRNT1	99	85.253	ENSSSCG00000011529	TRNT1	100	85.253	Sus_scrofa
ENSOCUG00000008580	TRNT1	94	72.840	ENSTGUG00000010192	TRNT1	99	72.840	Taeniopygia_guttata
ENSOCUG00000008580	TRNT1	94	66.585	ENSTRUG00000001088	trnt1	95	66.585	Takifugu_rubripes
ENSOCUG00000008580	TRNT1	99	66.745	ENSTNIG00000007363	trnt1	98	66.745	Tetraodon_nigroviridis
ENSOCUG00000008580	TRNT1	77	66.107	ENSTBEG00000006367	TRNT1	100	66.107	Tupaia_belangeri
ENSOCUG00000008580	TRNT1	99	85.253	ENSTTRG00000007803	TRNT1	100	85.253	Tursiops_truncatus
ENSOCUG00000008580	TRNT1	100	84.862	ENSUAMG00000022574	TRNT1	100	84.862	Ursus_americanus
ENSOCUG00000008580	TRNT1	100	84.862	ENSUMAG00000024092	TRNT1	100	84.862	Ursus_maritimus
ENSOCUG00000008580	TRNT1	100	84.404	ENSVVUG00000012810	TRNT1	100	84.404	Vulpes_vulpes
ENSOCUG00000008580	TRNT1	96	64.593	ENSXETG00000025091	trnt1	99	65.174	Xenopus_tropicalis
ENSOCUG00000008580	TRNT1	97	66.986	ENSXCOG00000010150	trnt1	98	66.986	Xiphophorus_couchianus
ENSOCUG00000008580	TRNT1	97	66.507	ENSXMAG00000002227	trnt1	98	66.507	Xiphophorus_maculatus